Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G019 Micromonas commoda HOM05D005553 ORTHO05D006866 4.1e-96 354.8 185 100.0
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 9.7e-21 104.4 156 39.7
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 9.1e-19 97.8 168 38.7
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 1.2e-18 97.4 140 39.3
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 2.7e-18 96.3 151 41.7
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 1.3e-17 94.0 170 35.3
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 8.5e-17 91.3 170 35.3
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 1.5e-16 90.5 148 39.2
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 1.9e-16 90.1 166 35.5
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 7.2e-16 88.2 150 38.7
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 9.4e-16 87.8 171 35.1
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 1.2e-15 87.4 171 33.3
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 2.1e-15 86.7 166 33.1
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 2.1e-15 86.7 170 32.9
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 3.6e-15 85.9 165 35.2
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 6.1e-15 85.1 150 35.3
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 6.1e-15 85.1 170 31.8
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 6.1e-15 85.1 150 35.3
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 6.1e-15 85.1 170 33.5
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 1.4e-14 84.0 166 33.1
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 1.4e-14 84.0 150 34.7
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 1.8e-14 83.6 149 36.9
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 2.3e-14 83.2 170 32.4
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 3.0e-14 82.8 165 33.3
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 3.0e-14 82.8 170 32.9
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 4.0e-14 82.4 166 32.5
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 4.0e-14 82.4 150 34.7
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 4.0e-14 82.4 165 33.3
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 5.2e-14 82.0 168 32.7
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 5.2e-14 82.0 170 32.9
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 6.8e-14 81.6 166 31.9
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 6.8e-14 81.6 170 32.4
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 6.8e-14 81.6 149 36.2
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 8.8e-14 81.3 149 36.2
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 8.8e-14 81.3 170 31.8
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 8.8e-14 81.3 149 36.2
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 8.8e-14 81.3 150 34.7
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 8.8e-14 81.3 149 36.9
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 1.2e-13 80.9 166 32.5
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 1.2e-13 80.9 170 32.9
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 1.5e-13 80.5 165 32.7
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 1.5e-13 80.5 150 34.0
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 2.0e-13 80.1 150 34.7
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 2.0e-13 80.1 149 35.6
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 2.0e-13 80.1 165 30.9
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 2.0e-13 80.1 165 32.7
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 2.6e-13 79.7 152 33.6
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 2.6e-13 79.7 150 34.7
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 2.6e-13 79.7 184 30.4
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 2.6e-13 79.7 170 31.2
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 3.4e-13 79.3 152 33.6
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 3.4e-13 79.3 166 32.5
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 4.4e-13 79.0 150 34.7
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 4.4e-13 79.0 165 32.1
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 4.4e-13 79.0 149 34.9
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 4.4e-13 79.0 149 34.9
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 5.7e-13 78.6 181 30.4
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 7.5e-13 78.2 149 34.9
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 9.8e-13 77.8 150 33.3
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 9.8e-13 77.8 165 31.5
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 9.8e-13 77.8 165 30.3
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 9.8e-13 77.8 144 34.7
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 9.8e-13 77.8 143 34.3
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 1.3e-12 77.4 150 36.0
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 1.3e-12 77.4 165 31.5
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 1.3e-12 77.4 169 32.0
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.7e-12 77.0 150 33.3
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 1.7e-12 77.0 149 34.9
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 1.7e-12 77.0 149 34.9
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 1.7e-12 77.0 150 34.0
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 1.7e-12 77.0 170 31.2
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 1.7e-12 77.0 170 32.4
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 1.7e-12 77.0 170 30.6
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 1.7e-12 77.0 149 34.2
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 2.2e-12 76.6 166 31.3
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 2.2e-12 76.6 170 31.2
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 2.8e-12 76.3 165 31.5
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 6.3e-12 75.1 170 30.0
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 6.3e-12 75.1 170 30.6
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 8.3e-12 74.7 170 30.0
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 8.3e-12 74.7 165 32.1
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 1.8e-11 73.6 165 31.5
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 1.8e-11 73.6 170 30.6
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 2.4e-11 73.2 165 30.9
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 3.1e-11 72.8 165 30.9
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 4.1e-11 72.4 165 29.7
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 7.0e-11 71.6 170 31.2
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 7.0e-11 71.6 152 33.6
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 9.1e-11 71.2 170 28.2
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 9.1e-11 71.2 165 29.7
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 9.1e-11 71.2 149 32.9
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 9.1e-11 71.2 165 31.5
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 1.2e-10 70.9 157 29.9
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 1.2e-10 70.9 170 28.8
arahy.Tifrunner.gnm1.ann1.3A36EA Arachis hypogaea HOM05D005553 ORTHO05D006866 1.6e-10 70.5 151 30.5
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 1.6e-10 70.5 165 31.5
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 1.6e-10 70.5 170 28.8
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 1.6e-10 70.5 170 28.8
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 1.6e-10 70.5 143 34.3
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 1.6e-10 70.5 126 35.7
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 2.0e-10 70.1 170 30.6
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 3.5e-10 69.3 165 30.9
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 7.7e-10 68.2 157 29.9
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 1.3e-09 67.4 162 32.1
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 1.7e-09 67.0 165 29.1
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 6.5e-09 65.1 143 32.9
Cre01.g013400 Chlamydomonas reinhardtii HOM05D005553 ORTHO05D006866 8.6e-09 64.7 144 30.6
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 8.6e-09 64.7 143 30.8
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 1.1e-08 64.3 143 30.8
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 1.5e-08 63.9 85 41.2
Cfa026900 Carpinus fangiana HOM05D005553 ORTHO05D006866 2.8e-07 59.7 106 33.0


User provided reference genes

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