Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO08G262 Micromonas commoda HOM05D004605 ORTHO05D005804 8.5e-131 470.3 233 100.0
Mapoly0001s0057 Marchantia polymorpha HOM05D004605 ORTHO05D005804 4.3e-34 149.1 233 38.2
Cre12.g553700 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 8.2e-33 144.8 235 39.6
Zm00001eb219300 Zea mays HOM05D004605 ORTHO05D005804 1.4e-32 144.1 230 37.0
Sopen02g034020 Solanum pennellii HOM05D004605 ORTHO05D005804 2.9e-30 136.3 230 37.4
TWI60G1007 Tripterygium wilfordii HOM05D004605 ORTHO05D005804 2.9e-30 136.3 230 36.5
Pp3c14_20450 Physcomitrium patens HOM05D004605 ORTHO05D005804 5.0e-30 135.6 233 38.6
Potri.017G100000 Populus trichocarpa HOM05D004605 ORTHO05D005804 6.5e-30 135.2 230 36.1
Zm00001eb049940 Zea mays HOM05D004605 ORTHO05D005804 6.5e-30 135.2 230 35.2
Solyc02g089230.3 Solanum lycopersicum HOM05D004605 ORTHO05D005804 8.5e-30 134.8 230 37.4
MD17G1065700 Malus domestica HOM05D004605 ORTHO05D005804 1.1e-29 134.4 230 36.5
SMO223G0030 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 1.1e-29 134.4 231 37.2
Manes.01G103400 Manihot esculenta HOM05D004605 ORTHO05D005804 2.5e-29 133.3 230 37.4
Sabra17G0086200 Salix brachista HOM05D004605 ORTHO05D005804 2.5e-29 133.3 225 37.3
MD09G1074300 Malus domestica HOM05D004605 ORTHO05D005804 3.2e-29 132.9 230 36.1
Manes.02G059400 Manihot esculenta HOM05D004605 ORTHO05D005804 4.2e-29 132.5 230 36.5
Nitab4.5_0007530g0010 Nicotiana tabacum HOM05D004605 ORTHO05D005804 4.2e-29 132.5 230 36.5
PGSC0003DMG400001379 Solanum tuberosum HOM05D004605 ORTHO05D005804 5.5e-29 132.1 230 36.5
Os03g0598900 Oryza sativa ssp. japonica HOM05D004605 ORTHO05D005804 7.2e-29 131.7 230 36.1
CAN.G497.71 Capsicum annuum HOM05D004605 ORTHO05D005804 1.2e-28 131.0 228 36.0
Ciclev10012619m.g Citrus clementina HOM05D004605 ORTHO05D005804 1.2e-28 131.0 230 36.1
Lsat_1_v5_gn_2_90241 Lactuca sativa HOM05D004605 ORTHO05D005804 1.2e-28 131.0 230 36.1
Lju361C6G5 Lonicera japonica HOM05D004605 ORTHO05D005804 1.2e-28 131.0 230 36.5
HPP92_012260 Vanilla planifolia HOM05D004605 ORTHO05D005804 1.6e-28 130.6 230 35.2
Nitab4.5_0001339g0150 Nicotiana tabacum HOM05D004605 ORTHO05D005804 2.1e-28 130.2 232 35.3
Gohir.D07G186600 Gossypium hirsutum HOM05D004605 ORTHO05D005804 4.7e-28 129.0 230 35.2
Gorai.001G207200 Gossypium raimondii HOM05D004605 ORTHO05D005804 4.7e-28 129.0 230 35.2
Gohir.A07G179800 Gossypium hirsutum HOM05D004605 ORTHO05D005804 6.1e-28 128.6 228 35.5
QL02p065873 Quercus lobata HOM05D004605 ORTHO05D005804 7.9e-28 128.3 230 34.3
Hund16233 Selenicereus undatus HOM05D004605 ORTHO05D005804 7.9e-28 128.3 230 35.2
Cfa007695 Carpinus fangiana HOM05D004605 ORTHO05D005804 1.0e-27 127.9 231 35.9
Thecc.04G106100 Theobroma cacao HOM05D004605 ORTHO05D005804 1.0e-27 127.9 230 35.7
CANSAT64G2231 Cannabis sativa HOM05D004605 ORTHO05D005804 1.8e-27 127.1 230 34.8
AagrBONN_evm.TU.Sc2ySwM_340.410 Anthoceros agrestis HOM05D004605 ORTHO05D005804 2.3e-27 126.7 162 42.0
Peaxi162Scf00020g10235 Petunia axillaris HOM05D004605 ORTHO05D005804 3.0e-27 126.3 230 34.3
Oeu031839.1 Olea europaea HOM05D004605 ORTHO05D005804 3.9e-27 125.9 228 36.0
TAR629G2115 Trochodendron aralioides HOM05D004605 ORTHO05D005804 3.9e-27 125.9 228 34.2
Prupe.3G249100 Prunus persica HOM05D004605 ORTHO05D005804 5.1e-27 125.6 232 34.5
Haze_14382 Corylus avellana HOM05D004605 ORTHO05D005804 1.1e-26 124.4 231 35.1
Glyma.18G273900 Glycine max HOM05D004605 ORTHO05D005804 1.1e-26 124.4 230 33.0
Phvul.008G027600 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 1.1e-26 124.4 230 33.0
GSVIVG01036547001 Vitis vinifera HOM05D004605 ORTHO05D005804 1.1e-26 124.4 230 33.5
Eucgr.I02062 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.5e-26 124.0 168 41.1
COL.COLO4_10258 Corchorus olitorius HOM05D004605 ORTHO05D005804 2.0e-26 123.6 230 35.2
Rhsim08G0077200 Rhododendron simsii HOM05D004605 ORTHO05D005804 2.6e-26 123.2 230 32.2
FvH4_6g46390 Fragaria vesca HOM05D004605 ORTHO05D005804 3.3e-26 122.9 232 34.5
Medtr7g016650 Medicago truncatula HOM05D004605 ORTHO05D005804 3.3e-26 122.9 230 32.2
VMungo1383G2960 Vigna mungo HOM05D004605 ORTHO05D005804 3.3e-26 122.9 230 32.6
Atru.chr8.648 Acer truncatum HOM05D004605 ORTHO05D005804 4.4e-26 122.5 230 34.3
Duzib133G0947 Durio zibethinus HOM05D004605 ORTHO05D005804 4.4e-26 122.5 230 34.3
Hma1.2p1_0474F.1_g160750 Hydrangea macrophylla HOM05D004605 ORTHO05D005804 5.7e-26 122.1 230 34.3
arahy.Tifrunner.gnm1.ann1.M6S7AL Arachis hypogaea HOM05D004605 ORTHO05D005804 7.4e-26 121.7 230 32.2
arahy.Tifrunner.gnm1.ann1.90K79T Arachis hypogaea HOM05D004605 ORTHO05D005804 1.3e-25 120.9 230 32.2
AUR62023160 Chenopodium quinoa HOM05D004605 ORTHO05D005804 1.3e-25 120.9 207 34.8
Phvul.008G027000 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 1.7e-25 120.6 230 31.3
RcHm_v2.0_Chr2g0164921 Rosa chinensis HOM05D004605 ORTHO05D005804 2.2e-25 120.2 232 33.6
Duzib138G1714 Durio zibethinus HOM05D004605 ORTHO05D005804 4.8e-25 119.0 230 33.5
ECA238G2860 Erigeron canadensis HOM05D004605 ORTHO05D005804 4.8e-25 119.0 232 34.5
Lj1g0025970 Lotus japonicus HOM05D004605 ORTHO05D005804 4.8e-25 119.0 230 31.3
PSO675G6317 Papaver somniferum HOM05D004605 ORTHO05D005804 4.8e-25 119.0 230 33.9
PSO732G0027 Papaver somniferum HOM05D004605 ORTHO05D005804 6.3e-25 118.6 230 33.9
AL7G51520 Arabidopsis lyrata HOM05D004605 ORTHO05D005804 8.2e-25 118.2 234 32.1
Lalb_Chr10g0092731 Lupinus albus HOM05D004605 ORTHO05D005804 8.2e-25 118.2 230 30.9
Phvul.008G026800 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 8.2e-25 118.2 230 31.3
Aa31LG9G16810 Aethionema arabicum HOM05D004605 ORTHO05D005804 1.1e-24 117.9 200 35.5
Carub.0007s3694 Capsella rubella HOM05D004605 ORTHO05D005804 1.1e-24 117.9 234 31.2
Ca_06902_v3 Cicer arietinum L. HOM05D004605 ORTHO05D005804 1.1e-24 117.9 230 32.6
HanXRQChr14g0452481 Helianthus annuus HOM05D004605 ORTHO05D005804 1.4e-24 117.5 230 33.5
SGA_v2.0_scaffold148G36445 Striga asiatica HOM05D004605 ORTHO05D005804 1.4e-24 117.5 232 31.5
VMungo1383G3490 Vigna mungo HOM05D004605 ORTHO05D005804 1.4e-24 117.5 230 33.0
Psat3g203400 Pisum sativum HOM05D004605 ORTHO05D005804 1.8e-24 117.1 230 31.3
BcaB02g07994 Brassica carinata HOM05D004605 ORTHO05D005804 4.1e-24 115.9 196 33.7
BolC6t37056H Brassica oleracea HOM05D004605 ORTHO05D005804 5.3e-24 115.5 196 34.2
AUR62009481 Chenopodium quinoa HOM05D004605 ORTHO05D005804 5.3e-24 115.5 203 34.0
Thhalv10027927m.g Eutrema salsugineum HOM05D004605 ORTHO05D005804 5.3e-24 115.5 200 33.5
MELO3C026298.2 Cucumis melo HOM05D004605 ORTHO05D005804 6.9e-24 115.2 236 33.1
Glyma.08G251200 Glycine max HOM05D004605 ORTHO05D005804 6.9e-24 115.2 230 31.7
Sp7g03000 Schrenkiella parvula HOM05D004605 ORTHO05D005804 6.9e-24 115.2 234 31.2
Sed0020846 Sechium edule HOM05D004605 ORTHO05D005804 9.1e-24 114.8 236 33.5
FAN05G4053 Fragaria x ananassa HOM05D004605 ORTHO05D005804 2.0e-23 113.6 238 32.8
THA.LOC104805526 Tarenaya hassleriana HOM05D004605 ORTHO05D005804 2.0e-23 113.6 232 33.2
Actinidia26268 Actinidia chinensis HOM05D004605 ORTHO05D005804 2.6e-23 113.2 230 32.2
Aqoxy3G03716 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 2.6e-23 113.2 230 33.9
CsaV3_4G010080 Cucumis sativus L. HOM05D004605 ORTHO05D005804 2.6e-23 113.2 236 32.6
SalBow1G3999 Salvia bowleyana HOM05D004605 ORTHO05D005804 4.5e-23 112.5 233 33.9
Cpa.g.sc14.228 Carica papaya HOM05D004605 ORTHO05D005804 1.0e-22 111.3 196 33.7
CiPaw.03G083100 Carya illinoinensis HOM05D004605 ORTHO05D005804 1.0e-22 111.3 230 32.2
DCAR_021425 Daucus carota HOM05D004605 ORTHO05D005804 1.3e-22 110.9 237 32.5
EL10Ac2g04442 Beta vulgaris HOM05D004605 ORTHO05D005804 1.7e-22 110.5 230 31.7
TPR.G23408 Trifolium pratense HOM05D004605 ORTHO05D005804 1.7e-22 110.5 230 31.7
CARHR263630 Cardamine hirsuta HOM05D004605 ORTHO05D005804 3.8e-22 109.4 200 32.5
CiPaw.03G083000 Carya illinoinensis HOM05D004605 ORTHO05D005804 3.8e-22 109.4 233 31.8
ATR0827G055 Amborella trichopoda HOM05D004605 ORTHO05D005804 5.0e-22 109.0 230 31.7
Migut.H00587 Erythranthe guttata HOM05D004605 ORTHO05D005804 6.5e-22 108.6 226 31.9
CSS0024904 Camellia sinensis var. sinensis HOM05D004605 ORTHO05D005804 8.5e-22 108.2 233 31.3
Aqoxy3G03715 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.1e-21 107.8 231 32.9
ClCG07G016040 Citrullus lanatus HOM05D004605 ORTHO05D005804 1.1e-21 107.8 234 32.5
Eucgr.L00721 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.9e-21 107.1 210 33.8
Eucgr.B03744 Eucalyptus grandis HOM05D004605 ORTHO05D005804 4.2e-21 105.9 210 34.8
Aqoxy3G03714 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 2.7e-20 103.2 231 30.3
MSTRG.15436 Avicennia marina HOM05D004605 ORTHO05D005804 2.7e-20 103.2 210 31.4
FAN14G2038 Fragaria x ananassa HOM05D004605 ORTHO05D005804 3.6e-20 102.8 211 32.2
MSTRG.15437 Avicennia marina HOM05D004605 ORTHO05D005804 1.4e-19 100.9 231 31.6
vmacro18128 Vaccinium macrocarpon HOM05D004605 ORTHO05D005804 6.7e-19 98.6 213 29.6
AagrBONN_evm.TU.Sc2ySwM_340.409 Anthoceros agrestis HOM05D004605 ORTHO05D005804 2.8e-17 93.2 190 33.7
FAN09G1153 Fragaria x ananassa HOM05D004605 ORTHO05D005804 4.8e-17 92.4 244 29.5
arahy.Tifrunner.gnm1.ann1.XASR8W Arachis hypogaea HOM05D004605 ORTHO05D005804 1.1e-16 91.3 154 33.1
CDE10G0487 Ceratophyllum demersum HOM05D004605 ORTHO05D005804 1.4e-16 90.9 119 40.3
AUR62024435 Chenopodium quinoa HOM05D004605 ORTHO05D005804 1.8e-16 90.5 132 37.9
Prupe.3G249000 Prunus persica HOM05D004605 ORTHO05D005804 2.4e-16 90.1 231 30.3
MBI16_g34534_MAGBIO Magnolia biondii HOM05D004605 ORTHO05D005804 9.1e-16 88.2 232 28.9
Sc10g0000600 Simmondsia chinensis HOM05D004605 ORTHO05D005804 5.0e-14 82.4 192 30.7
FAN02G3403 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.5e-13 80.9 172 32.0
Cc07_g04470 Coffea canephora HOM05D004605 ORTHO05D005804 5.5e-13 79.0 152 31.6
Eucgr.L00305 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.6e-12 77.4 132 35.6
QL02p053766 Quercus lobata HOM05D004605 ORTHO05D005804 1.6e-12 77.4 152 34.9
Aqoxy3G03713 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.4e-11 74.3 121 36.4
FvH4_6g46370 Fragaria vesca HOM05D004605 ORTHO05D005804 1.8e-11 73.9 233 29.6
Dinv33862 Davidia involucrata HOM05D004605 ORTHO05D005804 4.0e-11 72.8 143 32.2
SalBow3G1842 Salvia bowleyana HOM05D004605 ORTHO05D005804 4.0e-11 72.8 168 29.8
HPP92_012204 Vanilla planifolia HOM05D004605 ORTHO05D005804 6.5e-06 55.5 140 27.9


User provided reference genes

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