Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.6e-192 676.0 358 100.0
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 6.3e-101 371.7 303 65.3
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 5.9e-91 338.6 288 58.3
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 6.6e-90 335.1 296 57.1
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 8.6e-90 334.7 288 58.0
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 1.5e-89 334.0 288 58.0
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 2.5e-89 333.2 289 57.8
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 3.3e-89 332.8 289 56.4
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 3.3e-89 332.8 296 55.7
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 3.3e-89 332.8 296 55.4
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 9.5e-89 331.3 296 55.7
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 9.5e-89 331.3 296 55.1
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 1.2e-88 330.9 296 55.7
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.2e-88 330.9 288 56.6
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.2e-88 330.9 296 55.1
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 2.1e-88 330.1 296 55.7
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 2.8e-88 329.7 295 53.9
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 2.8e-88 329.7 295 53.6
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.8e-88 329.7 296 55.1
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 2.8e-88 329.7 300 54.0
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 2.8e-88 329.7 288 57.3
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 3.6e-88 329.3 288 59.0
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 3.6e-88 329.3 296 55.7
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 3.6e-88 329.3 296 54.7
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 3.6e-88 329.3 296 54.7
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 3.6e-88 329.3 296 55.1
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 4.7e-88 328.9 298 55.7
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 4.7e-88 328.9 296 56.1
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 4.7e-88 328.9 295 53.6
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 6.1e-88 328.6 288 56.9
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 6.1e-88 328.6 287 56.4
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 8.0e-88 328.2 288 57.3
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 8.0e-88 328.2 288 56.9
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.0e-87 327.8 296 55.1
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.0e-87 327.8 296 54.7
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 1.0e-87 327.8 288 56.9
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 1.0e-87 327.8 296 54.7
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 1.4e-87 327.4 296 54.1
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.4e-87 327.4 303 54.8
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 1.8e-87 327.0 296 55.1
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 2.3e-87 326.6 296 53.7
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 3.0e-87 326.2 296 55.4
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 3.0e-87 326.2 296 55.1
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 4.0e-87 325.9 296 54.4
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 4.0e-87 325.9 296 55.4
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 4.0e-87 325.9 296 55.4
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 4.0e-87 325.9 297 53.9
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 5.2e-87 325.5 296 54.7
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 5.2e-87 325.5 293 56.7
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 5.2e-87 325.5 300 53.0
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 5.2e-87 325.5 300 53.0
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 5.2e-87 325.5 300 53.0
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 5.2e-87 325.5 288 56.9
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 5.2e-87 325.5 293 55.6
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 6.8e-87 325.1 296 55.4
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 6.8e-87 325.1 300 53.0
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 6.8e-87 325.1 288 56.2
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 8.9e-87 324.7 296 54.7
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 8.9e-87 324.7 296 54.7
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 8.9e-87 324.7 300 54.3
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.2e-86 324.3 288 55.9
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 1.5e-86 323.9 292 55.8
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 1.5e-86 323.9 296 53.7
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 2.0e-86 323.6 296 53.7
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 2.0e-86 323.6 295 56.3
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 2.0e-86 323.6 303 54.8
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 2.6e-86 323.2 296 54.4
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 2.6e-86 323.2 296 54.4
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 3.4e-86 322.8 288 56.9
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 3.4e-86 322.8 304 54.6
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 4.4e-86 322.4 296 53.4
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 5.8e-86 322.0 289 56.7
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 5.8e-86 322.0 299 54.2
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 9.8e-86 321.2 296 53.4
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 9.8e-86 321.2 299 54.8
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 9.8e-86 321.2 288 56.2
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 1.7e-85 320.5 288 56.2
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 2.9e-85 319.7 294 54.8
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 3.7e-85 319.3 288 55.2
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 3.7e-85 319.3 288 55.9
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 4.9e-85 318.9 288 55.6
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 6.4e-85 318.5 288 56.2
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 8.3e-85 318.2 296 53.0
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 8.3e-85 318.2 296 54.4
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 1.1e-84 317.8 266 58.6
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 1.1e-84 317.8 300 54.0
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 1.1e-84 317.8 287 56.1
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 1.4e-84 317.4 288 56.6
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 1.8e-84 317.0 300 52.0
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 5.4e-84 315.5 289 56.1
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 5.4e-84 315.5 288 55.2
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 7.0e-84 315.1 300 54.0
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 2.0e-83 313.5 288 54.5
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.0e-83 313.5 296 53.0
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.6e-83 312.4 291 54.0
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 2.3e-82 310.1 296 53.0
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 8.6e-82 308.1 289 54.0
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 8.6e-82 308.1 295 52.5
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.1e-81 307.8 314 52.2
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.1e-81 307.8 328 50.9
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 1.5e-81 307.4 338 49.1
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 8.0e-80 301.6 288 54.9
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 4.0e-79 299.3 295 50.5
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 1.2e-78 297.7 273 55.3
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 7.5e-78 295.0 348 46.0
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 9.8e-78 294.7 266 54.5
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 3.5e-75 286.2 313 49.8
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 3.0e-74 283.1 253 55.3
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 3.9e-74 282.7 246 56.5
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.0e-74 282.3 280 52.9
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 2.0e-70 270.4 262 55.0
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 2.4e-68 263.5 213 59.6
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.4e-60 237.7 287 46.0
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 1.0e-58 231.5 192 57.3
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.5e-49 201.1 210 50.0
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 3.1e-47 193.4 149 63.1
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 3.3e-41 173.3 170 53.5
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 4.8e-24 116.3 166 38.6
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 5.3e-23 112.8 129 45.0
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.7e-21 107.8 103 53.4
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.0e-18 98.6 183 31.7
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.5e-17 94.7 92 48.9
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.1e-15 86.7 105 44.8
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.6e-11 73.6 89 46.1
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 5.1e-10 69.7 74 44.6


User provided reference genes

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