Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO08G169 Micromonas commoda HOM05D005160 ORTHO05D006127 1.7e-222 775.8 430 100.0
MCO01G409 Micromonas commoda HOM05D005160 ORTHO05D006127 4.6e-74 282.7 414 39.1
Cre09.g390467 Chlamydomonas reinhardtii HOM05D005160 ORTHO05D006127 7.2e-51 205.7 431 32.0
PRCOL_00003313 Prasinoderma coloniale HOM05D005160 ORTHO05D006127 8.0e-50 202.2 380 34.5
CBR_g32587 Chara braunii HOM05D005160 ORTHO05D006127 1.1e-43 181.8 358 33.2
Mapoly0029s0105 Marchantia polymorpha HOM05D005160 ORTHO05D006127 2.0e-40 171.0 344 31.4
Cre14.g617800 Chlamydomonas reinhardtii HOM05D005160 ORTHO05D006127 9.8e-40 168.7 445 29.4
Cre06.g278550 Chlamydomonas reinhardtii HOM05D005160 ORTHO05D006127 1.7e-36 157.9 409 28.9
Pp3c15_6240 Physcomitrium patens HOM05D005160 ORTHO05D006127 4.7e-34 149.8 353 28.6
Pp3c24_1990 Physcomitrium patens HOM05D005160 ORTHO05D006127 4.4e-32 143.3 351 29.6
Eucgr.I01400 Eucalyptus grandis HOM05D005160 ORTHO05D006127 2.9e-31 140.6 355 29.0
CSS0048155 Camellia sinensis var. sinensis HOM05D005160 ORTHO05D006127 1.1e-30 138.7 355 29.9
EL10Ac9g21400 Beta vulgaris HOM05D005160 ORTHO05D006127 1.6e-29 134.8 351 27.9
Prupe.8G163700 Prunus persica HOM05D005160 ORTHO05D006127 1.6e-29 134.8 351 29.3
SEGI_02117 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 1.6e-29 134.8 349 26.9
SMO012G0038 Selaginella moellendorffii HOM05D005160 ORTHO05D006127 2.0e-29 134.4 355 27.0
THA.LOC104824770 Tarenaya hassleriana HOM05D005160 ORTHO05D006127 2.0e-29 134.4 378 27.5
RcHm_v2.0_Chr6g0244091 Rosa chinensis HOM05D005160 ORTHO05D006127 4.6e-29 133.3 351 27.9
COL.COLO4_17310 Corchorus olitorius HOM05D005160 ORTHO05D006127 1.0e-28 132.1 348 27.9
SalBow1G7891 Salvia bowleyana HOM05D005160 ORTHO05D006127 1.3e-28 131.7 335 29.0
Lsat_1_v5_gn_3_46280 Lactuca sativa HOM05D005160 ORTHO05D006127 1.7e-28 131.3 352 29.0
TWI31G1222 Tripterygium wilfordii HOM05D005160 ORTHO05D006127 1.7e-28 131.3 351 28.2
Aa31LG6G16530 Aethionema arabicum HOM05D005160 ORTHO05D006127 2.3e-28 131.0 353 28.3
Duzib132G0556 Durio zibethinus HOM05D005160 ORTHO05D006127 2.3e-28 131.0 335 29.0
Lj3g0012456 Lotus japonicus HOM05D005160 ORTHO05D006127 2.9e-28 130.6 351 28.8
THA.LOC104804092 Tarenaya hassleriana HOM05D005160 ORTHO05D006127 2.9e-28 130.6 378 27.2
Aqoxy5G01804 Aquilegia oxysepala HOM05D005160 ORTHO05D006127 3.9e-28 130.2 351 27.9
GSVIVG01024045001 Vitis vinifera HOM05D005160 ORTHO05D006127 3.9e-28 130.2 351 27.6
AL7G10530 Arabidopsis lyrata HOM05D005160 ORTHO05D006127 8.6e-28 129.0 351 28.2
Thhalv10024826m.g Eutrema salsugineum HOM05D005160 ORTHO05D006127 8.6e-28 129.0 351 27.9
TWI75G0220 Tripterygium wilfordii HOM05D005160 ORTHO05D006127 8.6e-28 129.0 335 29.3
FAN15G3563 Fragaria x ananassa HOM05D005160 ORTHO05D006127 1.5e-27 128.3 351 27.1
FAN20G0465 Fragaria x ananassa HOM05D005160 ORTHO05D006127 1.5e-27 128.3 351 27.1
QL11p049938 Quercus lobata HOM05D005160 ORTHO05D006127 1.5e-27 128.3 356 28.1
AT4G38640 Arabidopsis thaliana HOM05D005160 ORTHO05D006127 1.9e-27 127.9 352 28.1
FvH4_2g01450 Fragaria vesca HOM05D005160 ORTHO05D006127 1.9e-27 127.9 351 27.1
FAN24G2272 Fragaria x ananassa HOM05D005160 ORTHO05D006127 1.9e-27 127.9 351 27.1
FAN27G2227 Fragaria x ananassa HOM05D005160 ORTHO05D006127 1.9e-27 127.9 351 26.5
Hma1.2p1_0163F.1_g072320 Hydrangea macrophylla HOM05D005160 ORTHO05D006127 1.9e-27 127.9 354 27.7
Migut.B00095 Erythranthe guttata HOM05D005160 ORTHO05D006127 2.5e-27 127.5 353 26.9
Carub.0007s0051 Capsella rubella HOM05D005160 ORTHO05D006127 3.3e-27 127.1 351 27.9
CARHR294360 Cardamine hirsuta HOM05D005160 ORTHO05D006127 3.3e-27 127.1 353 27.5
Ciclev10028126m.g Citrus clementina HOM05D005160 ORTHO05D006127 4.3e-27 126.7 351 28.2
Duzib052G1050 Durio zibethinus HOM05D005160 ORTHO05D006127 4.3e-27 126.7 335 28.7
TAR381G1224 Trochodendron aralioides HOM05D005160 ORTHO05D006127 5.6e-27 126.3 351 26.2
AUR62013051 Chenopodium quinoa HOM05D005160 ORTHO05D006127 7.3e-27 125.9 351 26.8
CsaV3_2G015970 Cucumis sativus L. HOM05D005160 ORTHO05D006127 7.3e-27 125.9 351 27.1
Sp7g37140 Schrenkiella parvula HOM05D005160 ORTHO05D006127 7.3e-27 125.9 351 27.4
Hund06424 Selenicereus undatus HOM05D005160 ORTHO05D006127 7.3e-27 125.9 351 25.9
MELO3C020808.2 Cucumis melo HOM05D005160 ORTHO05D006127 1.2e-26 125.2 351 26.8
Thecc.02G062800 Theobroma cacao HOM05D005160 ORTHO05D006127 1.2e-26 125.2 349 27.2
AagrBONN_evm.TU.Sc2ySwM_228.1713 Anthoceros agrestis HOM05D022446 ORTHO05D006127 1.6e-26 124.8 389 27.0
AUR62010059 Chenopodium quinoa HOM05D005160 ORTHO05D006127 1.6e-26 124.8 351 26.8
ClCG02G011810 Citrullus lanatus HOM05D005160 ORTHO05D006127 2.1e-26 124.4 351 26.2
MBI09_g14140_MAGBIO Magnolia biondii HOM05D005160 ORTHO05D006127 2.1e-26 124.4 339 26.8
MD10G1123200 Malus domestica HOM05D005160 ORTHO05D006127 2.1e-26 124.4 352 28.1
MSTRG.16896 Avicennia marina HOM05D005160 ORTHO05D006127 2.8e-26 124.0 351 26.8
Thecc.02G062500 Theobroma cacao HOM05D005160 ORTHO05D006127 2.8e-26 124.0 349 26.9
vmacro02269 Vaccinium macrocarpon HOM05D005160 ORTHO05D006127 3.6e-26 123.6 402 27.6
Nn5g30735 Nelumbo nucifera HOM05D005160 ORTHO05D006127 4.7e-26 123.2 375 26.4
Rhsim11G0191300 Rhododendron simsii HOM05D005160 ORTHO05D006127 4.7e-26 123.2 353 28.3
Sabra04G0115600 Salix brachista HOM05D005160 ORTHO05D006127 4.7e-26 123.2 350 26.6
Oeu014453.1 Olea europaea HOM05D005160 ORTHO05D006127 6.2e-26 122.9 351 26.2
Sed0006607 Sechium edule HOM05D005160 ORTHO05D006127 6.2e-26 122.9 351 26.8
Solyc01g111370.3 Solanum lycopersicum HOM05D005160 ORTHO05D006127 1.0e-25 122.1 349 28.1
C03p77200 Brassica napus HOM05D005160 ORTHO05D006127 1.4e-25 121.7 351 27.4
BolC3t19975H Brassica oleracea HOM05D005160 ORTHO05D006127 1.4e-25 121.7 353 26.9
Cc02_g16320 Coffea canephora HOM05D005160 ORTHO05D006127 1.4e-25 121.7 351 27.9
Potri.009G132900 Populus trichocarpa HOM05D005160 ORTHO05D006127 1.4e-25 121.7 351 25.9
PGSC0003DMG402006199 Solanum tuberosum HOM05D005160 ORTHO05D006127 1.4e-25 121.7 351 27.4
Atru.chr5.3293 Acer truncatum HOM05D005160 ORTHO05D006127 1.8e-25 121.3 353 26.9
BcaC01g00246 Brassica carinata HOM05D005160 ORTHO05D006127 1.8e-25 121.3 351 27.4
CAN.G588.54 Capsicum annuum HOM05D005160 ORTHO05D006127 1.8e-25 121.3 351 27.4
Potri.004G173600 Populus trichocarpa HOM05D005160 ORTHO05D006127 1.8e-25 121.3 351 25.9
CiPaw.05G080400 Carya illinoinensis HOM05D005160 ORTHO05D006127 2.3e-25 120.9 351 28.5
Medtr4g073620 Medicago truncatula HOM05D005160 ORTHO05D006127 2.3e-25 120.9 351 27.4
AagrBONN_evm.TU.Sc2ySwM_344.1211 Anthoceros agrestis HOM05D005160 ORTHO05D006127 3.1e-25 120.6 366 24.9
CiPaw.06G123200 Carya illinoinensis HOM05D005160 ORTHO05D006127 3.1e-25 120.6 341 28.7
SGA_v2.0_scaffold58G20392 Striga asiatica HOM05D005160 ORTHO05D006127 3.1e-25 120.6 336 26.8
Sopen01g053440 Solanum pennellii HOM05D005160 ORTHO05D006127 4.0e-25 120.2 349 27.5
Ca_19053_v3 Cicer arietinum L. HOM05D005160 ORTHO05D006127 6.8e-25 119.4 352 26.4
HanXRQChr17g0543921 Helianthus annuus HOM05D005160 ORTHO05D006127 6.8e-25 119.4 349 27.5
Nitab4.5_0005837g0020 Nicotiana tabacum HOM05D005160 ORTHO05D006127 8.9e-25 119.0 351 27.4
Haze_02160 Corylus avellana HOM05D005160 ORTHO05D006127 1.2e-24 118.6 352 27.8
ECA246G0167 Erigeron canadensis HOM05D005160 ORTHO05D006127 1.2e-24 118.6 294 29.3
Sc08g0003030 Simmondsia chinensis HOM05D005160 ORTHO05D006127 1.2e-24 118.6 351 26.2
A08p24110 Brassica napus HOM05D005160 ORTHO05D006127 1.5e-24 118.2 352 27.3
Glyma.12G031600 Glycine max HOM05D005160 ORTHO05D006127 1.5e-24 118.2 356 26.7
Lalb_Chr03g0025091 Lupinus albus HOM05D005160 ORTHO05D006127 1.5e-24 118.2 351 27.1
Peaxi162Scf00362g00839 Petunia axillaris HOM05D005160 ORTHO05D006127 1.5e-24 118.2 352 27.0
Phvul.011G034500 Phaseolus vulgaris HOM05D005160 ORTHO05D006127 2.0e-24 117.9 387 25.8
Psat7g175760 Pisum sativum HOM05D005160 ORTHO05D006127 2.0e-24 117.9 355 26.5
Manes.04G073300 Manihot esculenta HOM05D005160 ORTHO05D006127 2.6e-24 117.5 351 27.9
BcaB03g12216 Brassica carinata HOM05D005160 ORTHO05D006127 4.4e-24 116.7 355 26.2
Nitab4.5_0001891g0030 Nicotiana tabacum HOM05D005160 ORTHO05D006127 4.4e-24 116.7 351 26.5
PSO170G2472 Papaver somniferum HOM05D005160 ORTHO05D006127 5.8e-24 116.3 347 25.1
PSO700G0063 Papaver somniferum HOM05D005160 ORTHO05D006127 5.8e-24 116.3 347 25.1
Cfa005223 Carpinus fangiana HOM05D005160 ORTHO05D006127 7.5e-24 115.9 351 27.1
Dinv41951 Davidia involucrata HOM05D005160 ORTHO05D006127 7.5e-24 115.9 340 27.4
Actinidia20505 Actinidia chinensis HOM05D005160 ORTHO05D006127 9.8e-24 115.5 344 27.3
ATR0579G151 Amborella trichopoda HOM05D005160 ORTHO05D006127 1.3e-23 115.2 353 26.3
Sabra09G0103200 Salix brachista HOM05D005160 ORTHO05D006127 1.3e-23 115.2 362 26.2
Gohir.A01G166700 Gossypium hirsutum HOM05D005160 ORTHO05D006127 1.7e-23 114.8 349 26.4
Glyma.11G106500 Glycine max HOM05D005160 ORTHO05D006127 2.2e-23 114.4 352 26.4
Gohir.D01G157700 Gossypium hirsutum HOM05D005160 ORTHO05D006127 2.2e-23 114.4 349 26.1
Gorai.002G195800 Gossypium raimondii HOM05D005160 ORTHO05D006127 2.2e-23 114.4 349 26.1
VMungo1127G1693 Vigna mungo HOM05D005160 ORTHO05D006127 2.9e-23 114.0 351 25.9
DCAR_003159 Daucus carota HOM05D005160 ORTHO05D006127 1.4e-22 111.7 351 25.1
SGA_v2.0_scaffold32G13272 Striga asiatica HOM05D005160 ORTHO05D006127 2.7e-21 107.5 350 24.3
MD05G1119500 Malus domestica HOM05D005160 ORTHO05D006127 7.8e-21 105.9 352 26.4
Ah.01g022840 Amaranthus hybridus HOM05D005160 ORTHO05D006127 8.6e-20 102.4 352 25.3
CDE02G2386 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 1.5e-19 101.7 308 24.7
TPR.G39261 Trifolium pratense HOM05D005160 ORTHO05D006127 1.4e-17 95.1 276 26.8
CDE04G1868 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 2.3e-17 94.4 308 24.4
Lalb_Chr01g0001791 Lupinus albus HOM05D005160 ORTHO05D006127 9.2e-14 82.4 253 25.7
Oeu006646.1 Olea europaea HOM05D005160 ORTHO05D006127 1.2e-13 82.0 215 27.0
Lj5A181T55 Lonicera japonica HOM05D005160 ORTHO05D006127 4.6e-13 80.1 354 25.1
Manes.11G095300 Manihot esculenta HOM05D005160 ORTHO05D006127 3.1e-09 67.4 218 26.6
AL7G44960 Arabidopsis lyrata HOM05D005160 ORTHO05D006127 8.9e-09 65.9 364 23.6
SEGI_18476 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 3.7e-07 60.5 181 26.5
CBR_g34641 Chara braunii HOM05D003356 ORTHO05D004362 1.1e-06 58.9 358 22.9
CBR_g50441 Chara braunii HOM05D003356 ORTHO05D004362 1.4e-06 58.5 272 22.4
CBR_g34644 Chara braunii HOM05D003356 ORTHO05D004362 7.1e-06 56.2 231 24.7


User provided reference genes

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