Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO08G144 Micromonas commoda HOM05D004030 ORTHO05D004952 1.7e-51 205.7 99 100.0
Mapoly0022s0014 Marchantia polymorpha HOM05D004030 ORTHO05D004952 1.7e-16 89.4 97 46.4
AagrBONN_evm.TU.Sc2ySwM_362.2754 Anthoceros agrestis HOM05D004030 ORTHO05D004952 1.9e-15 85.9 99 39.4
arahy.Tifrunner.gnm1.ann1.6TT57W Arachis hypogaea HOM05D004030 ORTHO05D004952 4.3e-15 84.7 99 38.4
SEGI_23147 Sequoiadendron giganteum HOM05D004030 ORTHO05D004952 4.3e-15 84.7 99 39.4
Duzib235G1256 Durio zibethinus HOM05D004030 ORTHO05D004952 5.6e-15 84.3 99 40.4
COL.COLO4_31267 Corchorus olitorius HOM05D004030 ORTHO05D004952 7.3e-15 84.0 99 40.4
Lj6g0006857 Lotus japonicus HOM05D004030 ORTHO05D004952 7.3e-15 84.0 99 39.4
ATR0824G134 Amborella trichopoda HOM05D004030 ORTHO05D004952 9.5e-15 83.6 99 38.4
Glyma.04G063400 Glycine max HOM05D004030 ORTHO05D004952 9.5e-15 83.6 99 39.4
Thecc.06G168200 Theobroma cacao HOM05D004030 ORTHO05D004952 9.5e-15 83.6 99 40.4
Lalb_Chr18g0054631 Lupinus albus HOM05D004030 ORTHO05D004952 1.6e-14 82.8 99 38.4
Rhsim13G0189000 Rhododendron simsii HOM05D004030 ORTHO05D004952 1.6e-14 82.8 100 41.0
CDE10G0195 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 2.1e-14 82.4 99 39.4
MBI07_g09555_MAGBIO Magnolia biondii HOM05D004030 ORTHO05D004952 3.6e-14 81.6 99 40.4
Nn3g19533 Nelumbo nucifera HOM05D004030 ORTHO05D004952 3.6e-14 81.6 99 39.4
Os01g0759700 Oryza sativa ssp. japonica HOM05D004030 ORTHO05D004952 3.6e-14 81.6 99 39.4
arahy.Tifrunner.gnm1.ann1.M207AG Arachis hypogaea HOM05D004030 ORTHO05D004952 4.7e-14 81.3 102 37.3
PGR031G0618 Punica granatum HOM05D004030 ORTHO05D004952 4.7e-14 81.3 99 40.4
Cre01.g021750 Chlamydomonas reinhardtii HOM05D004030 ORTHO05D004952 6.2e-14 80.9 99 44.4
CSS0010331 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 8.1e-14 80.5 99 39.4
AagrBONN_evm.TU.Sc2ySwM_344.2041 Anthoceros agrestis HOM05D004030 ORTHO05D004952 1.1e-13 80.1 103 37.9
CAN.G411.88 Capsicum annuum HOM05D004030 ORTHO05D004952 1.1e-13 80.1 99 39.4
Ca_10308_v3 Cicer arietinum L. HOM05D004030 ORTHO05D004952 1.1e-13 80.1 99 35.4
Psat6g163160 Pisum sativum HOM05D004030 ORTHO05D004952 1.1e-13 80.1 99 36.4
THA.LOC104820602 Tarenaya hassleriana HOM05D004030 ORTHO05D004952 1.1e-13 80.1 99 38.4
Ciclev10015509m.g Citrus clementina HOM05D004030 ORTHO05D004952 1.4e-13 79.7 99 39.4
Prupe.4G063800 Prunus persica HOM05D004030 ORTHO05D004952 1.4e-13 79.7 99 39.4
TWI39G0053 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 1.4e-13 79.7 99 39.4
Medtr1g087790 Medicago truncatula HOM05D004030 ORTHO05D004952 1.8e-13 79.3 99 36.4
TAR627G0229 Trochodendron aralioides HOM05D004030 ORTHO05D004952 1.8e-13 79.3 99 38.4
Glyma.06G064600 Glycine max HOM05D004030 ORTHO05D004952 2.3e-13 79.0 99 37.4
PSO063G1415 Papaver somniferum HOM05D004030 ORTHO05D004952 2.3e-13 79.0 99 40.4
PSO782G4674 Papaver somniferum HOM05D004030 ORTHO05D004952 2.3e-13 79.0 99 40.4
GSVIVG01021235001 Vitis vinifera HOM05D004030 ORTHO05D004952 2.3e-13 79.0 99 37.4
Ah.09g233420 Amaranthus hybridus HOM05D004030 ORTHO05D004952 3.1e-13 78.6 99 37.4
CANSAT80G0365 Cannabis sativa HOM05D004030 ORTHO05D004952 3.1e-13 78.6 99 37.4
Gohir.A10G036100 Gossypium hirsutum HOM05D004030 ORTHO05D004952 3.1e-13 78.6 99 38.4
Gohir.D10G036800 Gossypium hirsutum HOM05D004030 ORTHO05D004952 3.1e-13 78.6 99 38.4
Gorai.011G038700 Gossypium raimondii HOM05D004030 ORTHO05D004952 3.1e-13 78.6 99 38.4
Manes.16G041300 Manihot esculenta HOM05D004030 ORTHO05D004952 3.1e-13 78.6 99 38.4
Phvul.009G089700 Phaseolus vulgaris HOM05D004030 ORTHO05D004952 3.1e-13 78.6 99 37.4
VMungo1309G1983 Vigna mungo HOM05D004030 ORTHO05D004952 3.1e-13 78.6 99 37.4
AUR62027698 Chenopodium quinoa HOM05D004030 ORTHO05D004952 4.0e-13 78.2 97 39.2
AUR62031227 Chenopodium quinoa HOM05D004030 ORTHO05D004952 4.0e-13 78.2 97 39.2
Dinv16793 Davidia involucrata HOM05D004030 ORTHO05D004952 4.0e-13 78.2 99 37.4
Zm00001eb370530 Zea mays HOM05D004030 ORTHO05D004952 4.0e-13 78.2 99 38.4
Aqoxy1G02017 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 5.2e-13 77.8 99 38.4
Cfa013812 Carpinus fangiana HOM05D004030 ORTHO05D004952 5.2e-13 77.8 94 38.3
Haze_22485 Corylus avellana HOM05D004030 ORTHO05D004952 5.2e-13 77.8 94 38.3
RcHm_v2.0_Chr5g0011231 Rosa chinensis HOM05D004030 ORTHO05D004952 5.2e-13 77.8 97 39.2
FvH4_3g37800 Fragaria vesca HOM05D004030 ORTHO05D004952 6.8e-13 77.4 97 39.2
FAN11G0126 Fragaria x ananassa HOM05D004030 ORTHO05D004952 6.8e-13 77.4 97 39.2
Potri.004G058700 Populus trichocarpa HOM05D004030 ORTHO05D004952 6.8e-13 77.4 100 42.0
Sed0004310 Sechium edule HOM05D004030 ORTHO05D004952 6.8e-13 77.4 99 37.4
SMO266G0004 Selaginella moellendorffii HOM05D004030 ORTHO05D004952 6.8e-13 77.4 99 39.4
arahy.Tifrunner.gnm1.ann1.G7P63M Arachis hypogaea HOM05D004030 ORTHO05D004952 8.9e-13 77.0 92 37.0
MELO3C002663.2 Cucumis melo HOM05D004030 ORTHO05D004952 8.9e-13 77.0 99 36.4
CsaV3_1G033240 Cucumis sativus L. HOM05D004030 ORTHO05D004952 8.9e-13 77.0 99 36.4
EL10Ac8g20580 Beta vulgaris HOM05D004030 ORTHO05D004952 1.2e-12 76.6 99 37.4
TWI63G1163 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 1.2e-12 76.6 99 38.4
FvH4_3g07540 Fragaria vesca HOM05D004030 ORTHO05D004952 1.5e-12 76.3 97 38.1
FAN11G3556 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.5e-12 76.3 97 38.1
Atru.chr10.1642 Acer truncatum HOM05D004030 ORTHO05D004952 2.0e-12 75.9 99 37.4
Actinidia16784 Actinidia chinensis HOM05D004030 ORTHO05D004952 2.0e-12 75.9 99 38.4
BraA09t39228Z Brassica rapa HOM05D004030 ORTHO05D004952 2.0e-12 75.9 99 34.3
Cc02_g15190 Coffea canephora HOM05D004030 ORTHO05D004952 2.0e-12 75.9 99 39.4
Eucgr.E02762 Eucalyptus grandis HOM05D004030 ORTHO05D004952 2.0e-12 75.9 99 37.4
FAN25G0294 Fragaria x ananassa HOM05D004030 ORTHO05D004952 2.0e-12 75.9 97 38.1
Haze_06204 Corylus avellana HOM05D004030 ORTHO05D004952 2.6e-12 75.5 94 37.2
Sabra11G0049100 Salix brachista HOM05D004030 ORTHO05D004952 2.6e-12 75.5 100 39.0
Cfa000628 Carpinus fangiana HOM05D004030 ORTHO05D004952 3.4e-12 75.1 94 37.2
MD10G1277900 Malus domestica HOM05D004030 ORTHO05D004952 3.4e-12 75.1 99 37.4
Potri.011G068100 Populus trichocarpa HOM05D004030 ORTHO05D004952 3.4e-12 75.1 99 38.4
Hund21166 Selenicereus undatus HOM05D004030 ORTHO05D004952 3.4e-12 75.1 100 36.0
TPR.G40724 Trifolium pratense HOM05D004030 ORTHO05D004952 3.4e-12 75.1 82 39.0
arahy.Tifrunner.gnm1.ann1.HYDG6Q Arachis hypogaea HOM05D004030 ORTHO05D004952 4.4e-12 74.7 87 36.8
A09p37120 Brassica napus HOM05D004030 ORTHO05D004952 4.4e-12 74.7 99 35.4
ClCG03G007580 Citrullus lanatus HOM05D004030 ORTHO05D004952 4.4e-12 74.7 100 37.0
Dinv40699 Davidia involucrata HOM05D004030 ORTHO05D004952 4.4e-12 74.7 100 38.0
Duzib160G0274 Durio zibethinus HOM05D004030 ORTHO05D004952 4.4e-12 74.7 99 37.4
FAN21G1198 Fragaria x ananassa HOM05D004030 ORTHO05D004952 5.8e-12 74.3 97 37.1
Carub.0001s2743 Capsella rubella HOM05D004030 ORTHO05D004952 7.5e-12 73.9 99 36.4
ECA248G1387 Erigeron canadensis HOM05D004030 ORTHO05D004952 7.5e-12 73.9 100 38.0
Thhalv10008084m.g Eutrema salsugineum HOM05D004030 ORTHO05D004952 7.5e-12 73.9 99 35.4
MD05G1298600 Malus domestica HOM05D004030 ORTHO05D004952 7.5e-12 73.9 99 37.4
Peaxi162Scf00302g00311 Petunia axillaris HOM05D004030 ORTHO05D004952 7.5e-12 73.9 100 38.0
Sp1g25170 Schrenkiella parvula HOM05D004030 ORTHO05D004952 7.5e-12 73.9 99 35.4
AT1G29220 Arabidopsis thaliana HOM05D004030 ORTHO05D004952 9.9e-12 73.6 99 36.4
DCAR_005202 Daucus carota HOM05D004030 ORTHO05D004952 9.9e-12 73.6 100 38.0
DCAR_020881 Daucus carota HOM05D004030 ORTHO05D004952 9.9e-12 73.6 100 38.0
HPP92_021480 Vanilla planifolia HOM05D004030 ORTHO05D004952 9.9e-12 73.6 99 36.4
BcaC05g26946 Brassica carinata HOM05D004030 ORTHO05D004952 1.3e-11 73.2 99 35.4
C05p27930 Brassica napus HOM05D004030 ORTHO05D004952 1.3e-11 73.2 99 35.4
QL05p048142 Quercus lobata HOM05D004030 ORTHO05D004952 1.3e-11 73.2 94 37.2
Sc07g0007700 Simmondsia chinensis HOM05D004030 ORTHO05D004952 1.3e-11 73.2 99 35.4
Solyc02g072510.3 Solanum lycopersicum HOM05D004030 ORTHO05D004952 1.3e-11 73.2 100 37.0
Sopen02g021480 Solanum pennellii HOM05D004030 ORTHO05D004952 1.3e-11 73.2 100 37.0
SGA_v2.0_scaffold1G00064 Striga asiatica HOM05D004030 ORTHO05D004952 1.3e-11 73.2 112 38.4
vmacro03922 Vaccinium macrocarpon HOM05D004030 ORTHO05D004952 1.3e-11 73.2 87 39.1
CiPaw.09G071100 Carya illinoinensis HOM05D004030 ORTHO05D004952 1.7e-11 72.8 99 33.3
HanXRQChr11g0350521 Helianthus annuus HOM05D004030 ORTHO05D004952 1.7e-11 72.8 100 37.0
Nitab4.5_0005171g0040 Nicotiana tabacum HOM05D004030 ORTHO05D004952 1.7e-11 72.8 100 38.0
Manes.17G057500 Manihot esculenta HOM05D004030 ORTHO05D004952 2.2e-11 72.4 83 39.8
arahy.Tifrunner.gnm1.ann1.JIP48Q Arachis hypogaea HOM05D004030 ORTHO05D004952 2.9e-11 72.0 91 34.1
CARHR028550 Cardamine hirsuta HOM05D004030 ORTHO05D004952 2.9e-11 72.0 99 36.4
PGSC0003DMG400028477 Solanum tuberosum HOM05D004030 ORTHO05D004952 2.9e-11 72.0 100 36.0
AL1G42980 Arabidopsis lyrata HOM05D004030 ORTHO05D004952 3.7e-11 71.6 99 35.4
FAN16G1462 Fragaria x ananassa HOM05D004030 ORTHO05D004952 3.7e-11 71.6 97 36.1
BcaB07g32509 Brassica carinata HOM05D004030 ORTHO05D004952 4.9e-11 71.2 99 34.3
Lalb_Chr15g0086161 Lupinus albus HOM05D004030 ORTHO05D004952 6.4e-11 70.9 87 36.8
Aa31LG6G6290 Aethionema arabicum HOM05D004030 ORTHO05D004952 1.1e-10 70.1 99 34.3
HPP92_010042 Vanilla planifolia HOM05D004030 ORTHO05D004952 1.4e-10 69.7 83 38.6
Migut.M01023 Erythranthe guttata HOM05D004030 ORTHO05D004952 1.9e-10 69.3 100 37.0
Ah.16g107150 Amaranthus hybridus HOM05D004030 ORTHO05D004952 2.4e-10 68.9 87 35.6
arahy.Tifrunner.gnm1.ann1.LWKQ47 Arachis hypogaea HOM05D004030 ORTHO05D004952 3.2e-10 68.6 87 33.3
CSS0023477 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 5.4e-10 67.8 75 41.3
COL.COLO4_06310 Corchorus olitorius HOM05D004030 ORTHO05D004952 5.4e-10 67.8 101 35.6
Nitab4.5_0007465g0050 Nicotiana tabacum HOM05D004030 ORTHO05D004952 5.4e-10 67.8 98 36.7
Lsat_1_v5_gn_1_111240 Lactuca sativa HOM05D004030 ORTHO05D004952 7.1e-10 67.4 100 36.0
Zm00001eb152490 Zea mays HOM05D004030 ORTHO05D004952 7.1e-10 67.4 89 36.0
Nn1g02598 Nelumbo nucifera HOM05D004030 ORTHO05D004952 9.2e-10 67.0 90 37.8
CSS0003365 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 2.1e-09 65.9 75 40.0
SalBow8G0896 Salvia bowleyana HOM05D004030 ORTHO05D004952 2.1e-09 65.9 88 36.4
Ah.16g108320 Amaranthus hybridus HOM05D004030 ORTHO05D004952 3.5e-09 65.1 73 37.0
Oeu043115.1 Olea europaea HOM05D004030 ORTHO05D004952 4.6e-09 64.7 84 38.1
SHI28530 Sapria himalayana HOM05D004030 ORTHO05D004952 7.8e-09 63.9 84 33.3
BolC5t31519H Brassica oleracea HOM05D004030 ORTHO05D004952 1.0e-08 63.5 109 29.4
Pp3c22_6900 Physcomitrium patens HOM05D004030 ORTHO05D004952 1.3e-08 63.2 86 33.7
CBR_g31948 Chara braunii HOM05D004030 ORTHO05D004952 1.7e-08 62.8 87 34.5
Sabra04G0038000 Salix brachista HOM05D004030 ORTHO05D004952 2.3e-08 62.4 103 32.0
Lj1A1189T62 Lonicera japonica HOM05D004030 ORTHO05D004952 5.1e-08 61.2 70 40.0
SalBow5G1441 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.1e-07 60.1 88 36.4
Peaxi162Scf00912g00019 Petunia axillaris HOM05D004030 ORTHO05D004952 3.3e-07 58.5 95 33.7
SalBow5G5223 Salvia bowleyana HOM05D004030 ORTHO05D004952 4.3e-07 58.2 70 38.6
CAN.G566.51 Capsicum annuum HOM05D004030 ORTHO05D004952 5.6e-07 57.8 98 33.7
Lsat_1_v5_gn_6_74880 Lactuca sativa HOM05D004030 ORTHO05D004952 2.1e-06 55.8 92 31.5
Pp3c21_660 Physcomitrium patens HOM05D004030 ORTHO05D004952 4.7e-06 54.7 56 39.3


User provided reference genes

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