Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 2.2e-254 881.7 418 100.0
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 3.3e-56 223.4 364 33.8
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 1.6e-47 194.5 363 33.3
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 1.6e-47 194.5 363 33.1
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 2.8e-47 193.7 369 33.3
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 3.6e-47 193.4 363 32.5
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 4.7e-47 193.0 363 33.1
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.0e-46 191.8 369 33.3
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 3.0e-46 190.3 374 32.9
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 4.0e-46 189.9 363 32.2
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 4.0e-46 189.9 363 32.2
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 8.9e-46 188.7 363 32.2
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 1.2e-45 188.3 364 33.0
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 1.2e-45 188.3 367 32.7
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 1.5e-45 188.0 363 32.2
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 3.4e-45 186.8 367 32.4
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 3.4e-45 186.8 364 32.7
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 3.4e-45 186.8 362 32.3
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 3.4e-45 186.8 363 32.2
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 4.4e-45 186.4 363 32.2
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 4.4e-45 186.4 362 31.8
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 4.4e-45 186.4 362 31.8
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 4.4e-45 186.4 365 34.5
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 4.4e-45 186.4 374 31.6
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 4.4e-45 186.4 362 31.5
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 4.4e-45 186.4 362 32.3
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 4.4e-45 186.4 369 32.0
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 4.4e-45 186.4 369 31.7
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 4.4e-45 186.4 365 31.8
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 4.4e-45 186.4 362 32.0
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 5.8e-45 186.0 363 32.2
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 5.8e-45 186.0 370 32.7
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 5.8e-45 186.0 379 31.1
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 5.8e-45 186.0 363 32.2
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 9.8e-45 185.3 369 31.4
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 9.8e-45 185.3 362 32.0
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 9.8e-45 185.3 363 32.2
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 9.8e-45 185.3 373 32.2
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 9.8e-45 185.3 368 33.2
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 1.3e-44 184.9 363 31.7
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.3e-44 184.9 363 32.0
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 1.3e-44 184.9 363 32.0
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 2.2e-44 184.1 370 32.2
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 2.9e-44 183.7 362 31.5
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 2.9e-44 183.7 363 31.4
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 2.9e-44 183.7 370 32.2
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 2.9e-44 183.7 365 32.3
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 2.9e-44 183.7 368 32.1
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 3.7e-44 183.3 368 32.1
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 3.7e-44 183.3 363 32.0
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 4.9e-44 183.0 361 31.6
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 4.9e-44 183.0 362 31.5
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 4.9e-44 183.0 378 31.2
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 4.9e-44 183.0 398 30.7
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 6.4e-44 182.6 360 31.7
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 6.4e-44 182.6 362 31.5
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 6.4e-44 182.6 363 32.0
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 8.3e-44 182.2 360 31.9
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 8.3e-44 182.2 338 32.8
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 8.3e-44 182.2 363 32.8
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 8.3e-44 182.2 372 32.5
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 8.3e-44 182.2 368 31.5
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 1.1e-43 181.8 362 31.5
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 1.1e-43 181.8 362 31.8
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.4e-43 181.4 368 32.3
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 1.4e-43 181.4 337 32.3
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 1.8e-43 181.0 362 32.0
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 1.8e-43 181.0 363 31.7
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 2.4e-43 180.6 363 31.1
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 2.4e-43 180.6 377 31.8
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 3.2e-43 180.3 368 30.7
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 3.2e-43 180.3 360 32.5
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 5.4e-43 179.5 356 31.7
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 5.4e-43 179.5 360 31.4
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 5.4e-43 179.5 378 31.0
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 7.0e-43 179.1 362 31.2
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.2e-42 178.3 363 30.9
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 1.2e-42 178.3 356 30.3
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.6e-42 177.9 362 31.2
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 1.6e-42 177.9 343 31.8
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 1.6e-42 177.9 385 30.9
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 1.6e-42 177.9 385 30.9
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 2.0e-42 177.6 373 31.4
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 2.0e-42 177.6 362 30.9
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 3.5e-42 176.8 359 30.9
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 1.0e-41 175.3 359 32.3
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 3.0e-41 173.7 378 30.2
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 3.0e-41 173.7 335 31.9
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 3.0e-41 173.7 389 30.1
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 1.1e-40 171.8 371 29.9
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 1.9e-40 171.0 379 30.3
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 9.5e-40 168.7 313 32.6
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 1.2e-39 168.3 369 30.1
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 1.6e-39 167.9 342 30.1
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 6.2e-39 166.0 368 30.2
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.4e-38 164.9 331 29.9
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 1.4e-38 164.9 313 32.6
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 2.3e-38 164.1 367 29.4
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 7.5e-37 159.1 363 31.1
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 9.8e-37 158.7 364 30.2
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 2.4e-35 154.1 309 30.7
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 3.2e-35 153.7 363 28.9
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 5.4e-35 152.9 318 31.4
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 2.1e-34 151.0 347 29.1
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 3.5e-34 150.2 340 31.5
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 4.6e-34 149.8 309 30.1
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 5.6e-32 142.9 414 27.3
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 9.5e-32 142.1 265 32.1
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 3.6e-31 140.2 256 32.4
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.6e-31 140.2 362 28.5
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.5e-29 134.8 225 33.3
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.5e-29 134.8 225 33.3
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 2.6e-29 134.0 225 32.9
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 3.4e-29 133.7 225 33.3
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 3.7e-28 130.2 367 26.2
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 1.5e-24 118.2 263 30.0
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 9.2e-19 99.0 306 26.1
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 8.7e-17 92.4 337 28.2
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.1e-15 87.8 146 32.9
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 7.3e-08 62.8 197 25.9
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 6.9e-06 56.2 79 35.4


User provided reference genes

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