Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 5.5e-195 684.1 344 100.0
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 3.8e-87 325.9 320 55.3
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 4.5e-72 275.8 337 43.3
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.1e-65 254.6 327 41.9
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 3.5e-64 249.6 319 43.6
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 3.9e-63 246.1 320 41.2
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.1e-62 244.6 322 42.5
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 8.9e-52 208.4 319 37.6
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.0e-47 194.9 334 37.4
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 2.6e-43 180.3 324 34.3
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 5.8e-43 179.1 324 35.5
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 6.4e-42 175.6 315 34.9
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 8.4e-42 175.3 323 32.8
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 8.4e-42 175.3 328 34.1
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.4e-41 174.5 318 33.0
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.9e-41 174.1 319 32.9
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 3.2e-41 173.3 318 32.4
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 3.2e-41 173.3 318 33.6
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 3.2e-41 173.3 319 34.8
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 9.2e-41 171.8 318 33.0
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 1.2e-40 171.4 318 33.3
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 2.7e-40 170.2 322 34.8
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 2.7e-40 170.2 318 32.7
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 2.7e-40 170.2 318 32.7
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 2.7e-40 170.2 318 33.0
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 3.5e-40 169.9 328 31.7
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 3.5e-40 169.9 319 32.0
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 1.7e-39 167.5 322 33.2
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 3.0e-39 166.8 324 31.8
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 3.0e-39 166.8 323 31.9
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 3.9e-39 166.4 318 33.0
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 3.9e-39 166.4 318 33.0
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 3.9e-39 166.4 322 31.7
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 3.9e-39 166.4 318 33.3
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 6.6e-39 165.6 319 32.6
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 8.6e-39 165.2 324 33.6
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 8.6e-39 165.2 318 31.4
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 8.6e-39 165.2 318 31.8
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 1.1e-38 164.9 321 32.1
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.5e-38 164.5 318 32.7
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 1.5e-38 164.5 324 31.2
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.5e-38 164.5 324 32.4
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 2.5e-38 163.7 320 32.2
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 2.5e-38 163.7 319 31.3
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 3.3e-38 163.3 324 33.0
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 3.3e-38 163.3 324 33.0
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 3.3e-38 163.3 324 32.7
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 7.3e-38 162.2 318 33.0
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 7.3e-38 162.2 320 32.2
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 1.2e-37 161.4 334 30.8
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.6e-37 161.0 318 31.4
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 2.1e-37 160.6 318 30.5
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 2.1e-37 160.6 318 30.5
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 4.7e-37 159.5 323 32.2
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 4.7e-37 159.5 318 31.4
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 6.2e-37 159.1 325 32.0
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 6.2e-37 159.1 318 30.8
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 8.1e-37 158.7 185 43.2
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 8.1e-37 158.7 321 31.5
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 1.8e-36 157.5 319 31.0
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.8e-36 157.5 318 30.8
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 2.4e-36 157.1 318 31.8
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 2.4e-36 157.1 286 36.0
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 5.2e-36 156.0 338 31.4
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 5.2e-36 156.0 322 30.7
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 6.8e-36 155.6 323 31.6
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 2.0e-35 154.1 317 32.8
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 2.0e-35 154.1 329 31.6
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 3.4e-35 153.3 318 30.5
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 5.8e-35 152.5 324 30.6
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 7.6e-35 152.1 328 30.2
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 1.9e-33 147.5 335 31.9
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 4.2e-33 146.4 294 32.7
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 5.4e-33 146.0 272 33.1
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.6e-32 144.4 263 34.6
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 6.0e-32 142.5 286 31.8
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 1.7e-31 141.0 250 33.2
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.9e-30 137.5 175 41.1
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 2.5e-30 137.1 251 33.5
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 6.2e-29 132.5 384 27.1
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 6.2e-29 132.5 274 30.7
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 8.1e-29 132.1 274 30.3
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 1.2e-27 128.3 262 30.5
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 4.5e-27 126.3 262 31.3
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 5.8e-27 125.9 434 25.1
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 2.4e-25 120.6 258 32.2
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 9.3e-25 118.6 293 30.4
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 1.1e-20 105.1 208 33.7
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.8e-20 104.4 174 35.6
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 3.5e-16 90.1 286 28.7
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 1.0e-15 88.6 324 27.2
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 1.8e-15 87.8 123 37.4
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 6.7e-15 85.9 113 44.2
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 1.1e-14 85.1 253 25.7
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 3.3e-14 83.6 318 24.5
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 5.6e-14 82.8 176 30.1
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 7.4e-14 82.4 148 33.1
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 7.4e-14 82.4 94 40.4
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 5.8e-11 72.8 166 29.5
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 1.7e-10 71.2 133 33.8
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 3.8e-10 70.1 169 29.0
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 3.8e-10 70.1 141 30.5
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 2.5e-09 67.4 263 26.2
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 4.2e-09 66.6 173 25.4
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 5.5e-09 66.2 275 24.7
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 7.1e-09 65.9 172 27.3
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 9.3e-09 65.5 207 26.6
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 1.6e-08 64.7 261 25.7
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 1.0e-07 62.0 87 41.4
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 1.3e-07 61.6 278 25.2
Sp5g19260 Schrenkiella parvula HOM05D003793 ORTHO05D004471 1.9e-06 57.8 193 29.0
Aa31LG2G2160 Aethionema arabicum HOM05D003793 ORTHO05D004471 3.3e-06 57.0 193 29.5


User provided reference genes

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