Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 2.5e-248 862.1 571 100.0
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 2.9e-15 87.8 86 52.3
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-14 85.5 115 40.9
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.4e-14 85.5 76 57.9
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 1.9e-14 85.1 68 58.8
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 1.6e-13 82.0 101 47.5
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 1.6e-13 82.0 73 53.4
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 1.6e-13 82.0 70 57.1
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 2.7e-13 81.3 68 57.4
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 2.7e-13 81.3 68 57.4
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 2.7e-13 81.3 73 54.8
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 7.9e-13 79.7 68 55.9
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 7.9e-13 79.7 121 39.7
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.0e-12 79.3 68 58.8
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.4e-12 79.0 101 46.5
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 1.4e-12 79.0 101 46.5
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 3.0e-12 77.8 102 48.0
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 3.0e-12 77.8 73 53.4
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 3.9e-12 77.4 68 57.4
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 3.9e-12 77.4 100 43.0
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 3.9e-12 77.4 107 46.7
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 5.1e-12 77.0 66 54.5
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 5.1e-12 77.0 74 48.6
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 6.7e-12 76.6 64 59.4
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 6.7e-12 76.6 66 56.1
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 1.1e-11 75.9 100 43.0
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 1.5e-11 75.5 68 52.9
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 2.0e-11 75.1 102 43.1
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 2.6e-11 74.7 63 58.7
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 2.6e-11 74.7 68 52.9
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 2.6e-11 74.7 212 61.8
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 2.6e-11 74.7 212 62.3
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 2.6e-11 74.7 247 49.8
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 3.3e-11 74.3 101 44.6
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 3.3e-11 74.3 64 56.2
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 4.4e-11 73.9 64 54.7
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 4.4e-11 73.9 102 42.2
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 4.4e-11 73.9 93 43.0
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 5.7e-11 73.6 68 51.5
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 5.7e-11 73.6 68 51.5
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 5.7e-11 73.6 68 51.5
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 5.7e-11 73.6 67 53.7
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 9.7e-11 72.8 68 51.5
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 9.7e-11 72.8 64 54.7
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 1.3e-10 72.4 68 51.5
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 1.3e-10 72.4 64 53.1
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 1.7e-10 72.0 68 52.9
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 1.7e-10 72.0 68 51.5
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 1.7e-10 72.0 64 53.1
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 2.2e-10 71.6 112 38.4
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 2.2e-10 71.6 65 49.2
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 3.7e-10 70.9 68 50.0
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 3.7e-10 70.9 68 50.0
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 3.7e-10 70.9 68 50.0
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 6.3e-10 70.1 68 50.0
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 6.3e-10 70.1 68 50.0
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 6.3e-10 70.1 68 50.0
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 1.1e-09 69.3 123 39.0
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 1.1e-09 69.3 358 34.9
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 1.4e-09 68.9 71 53.5
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 1.8e-09 68.6 109 41.3
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 1.8e-09 68.6 72 48.6
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 2.4e-09 68.2 111 40.5
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 2.4e-09 68.2 108 39.8
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 4.1e-09 67.4 55 61.8
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 4.1e-09 67.4 123 39.8
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 6.9e-09 66.6 131 35.9
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 2.6e-08 64.7 136 38.2
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 2.6e-08 64.7 81 44.4
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 3.4e-08 64.3 124 37.9
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 5.9e-08 63.5 120 39.2
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 7.7e-08 63.2 101 38.6
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 1.7e-07 62.0 107 41.1
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.7e-07 62.0 52 55.8
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 3.8e-07 60.8 46 60.9
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 6.5e-07 60.1 44 68.2
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 1.4e-06 58.9 49 61.2
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 1.4e-06 58.9 47 61.7
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 1.9e-06 58.5 48 58.3
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 1.9e-06 58.5 102 36.3
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 3.2e-06 57.8 57 50.9
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 3.2e-06 57.8 57 50.9
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 5.5e-06 57.0 48 58.3
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 7.2e-06 56.6 47 59.6
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 7.2e-06 56.6 44 59.1
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 7.2e-06 56.6 48 60.4
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 7.2e-06 56.6 118 39.0


User provided reference genes

Program Settings