Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO08G047 Micromonas commoda HOM05D005394 ORTHO05D006909 0.0e+00 1675.6 897 100.0
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 8.7e-115 419.1 855 34.9
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 6.4e-110 402.9 850 33.4
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 4.2e-109 400.2 856 32.6
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 6.0e-108 396.4 858 33.2
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 3.0e-107 394.0 849 33.2
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 1.5e-106 391.7 853 33.3
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 5.3e-104 383.3 853 33.3
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 2.9e-102 377.5 877 31.8
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 1.1e-101 375.6 855 32.3
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 1.9e-101 374.8 855 31.9
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 3.0e-99 367.5 874 32.4
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 3.0e-99 367.5 855 32.0
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 5.1e-99 366.7 878 31.5
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 8.7e-99 365.9 858 30.7
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 1.1e-98 365.5 858 30.7
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 1.5e-98 365.2 855 31.5
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 1.9e-98 364.8 854 31.5
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 2.5e-98 364.4 858 30.7
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 5.6e-98 363.2 858 31.5
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 5.6e-98 363.2 878 30.6
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 1.3e-97 362.1 856 31.0
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 2.1e-97 361.3 853 31.2
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 6.2e-97 359.8 881 30.3
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 6.2e-97 359.8 854 31.5
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 1.4e-96 358.6 879 30.9
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 2.4e-96 357.8 855 31.6
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 2.4e-96 357.8 857 31.4
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 4.0e-96 357.1 849 30.9
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 5.3e-96 356.7 880 31.2
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 9.0e-96 355.9 855 32.0
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 1.2e-95 355.5 881 31.2
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 2.6e-95 354.4 862 30.5
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 4.5e-95 353.6 849 30.5
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 7.6e-95 352.8 879 30.9
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 7.6e-95 352.8 854 31.3
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 1.3e-94 352.1 853 31.4
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 1.7e-94 351.7 854 31.0
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 2.2e-94 351.3 853 31.3
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 1.9e-93 348.2 857 30.6
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.5e-93 347.8 855 30.3
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 4.2e-93 347.1 854 30.4
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 4.2e-93 347.1 883 31.0
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 7.1e-93 346.3 857 30.5
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 9.3e-93 345.9 854 31.5
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 1.2e-92 345.5 855 31.2
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 1.2e-92 345.5 855 31.5
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 1.6e-92 345.1 853 31.3
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.7e-92 344.4 857 30.5
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 2.7e-92 344.4 859 30.6
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 4.6e-92 343.6 814 31.6
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 6.0e-92 343.2 855 31.7
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 6.0e-92 343.2 872 31.3
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 6.0e-92 343.2 855 31.2
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 6.0e-92 343.2 855 30.3
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 3.0e-91 340.9 854 30.4
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 3.9e-91 340.5 857 30.3
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 6.7e-91 339.7 854 30.9
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 1.5e-90 338.6 855 31.1
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 1.9e-90 338.2 855 31.5
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 3.3e-90 337.4 860 30.7
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 4.3e-90 337.0 855 31.2
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 5.7e-90 336.7 855 31.3
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 7.4e-90 336.3 855 31.5
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 7.4e-90 336.3 853 30.7
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.3e-89 335.5 836 31.2
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 1.3e-89 335.5 855 29.6
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 1.6e-89 335.1 878 30.9
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 2.8e-89 334.3 854 30.2
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 2.8e-89 334.3 836 31.2
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 3.7e-89 334.0 855 30.8
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 4.8e-89 333.6 855 30.3
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 8.2e-89 332.8 854 30.2
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 1.8e-88 331.6 854 30.6
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 1.8e-88 331.6 854 30.3
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 5.3e-88 330.1 857 30.9
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 1.5e-87 328.6 814 31.0
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 2.0e-87 328.2 854 30.2
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 2.0e-87 328.2 853 29.9
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 3.8e-86 323.9 907 28.4
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 3.8e-86 323.9 906 29.4
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 5.0e-86 323.6 855 29.9
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 5.0e-86 323.6 854 30.4
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 6.5e-86 323.2 854 29.9
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 1.1e-85 322.4 894 29.6
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 1.4e-85 322.0 855 29.8
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 2.5e-85 321.2 856 29.9
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 2.5e-85 321.2 855 29.5
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 7.2e-85 319.7 944 29.1
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 7.2e-85 319.7 875 29.7
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 3.5e-84 317.4 881 29.9
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 4.6e-84 317.0 854 28.7
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 1.3e-83 315.5 836 29.8
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 1.8e-83 315.1 814 30.7
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 1.8e-83 315.1 850 29.6
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 1.8e-83 315.1 836 29.7
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 2.3e-83 314.7 880 28.5
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 3.0e-83 314.3 798 31.3
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 5.7e-82 310.1 875 29.3
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 5.3e-80 303.5 829 30.8
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 9.0e-80 302.8 859 29.0
Cre17.g721900 Chlamydomonas reinhardtii HOM05D005394 ORTHO05D006909 3.4e-79 300.8 855 31.9
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 5.0e-78 297.0 859 29.7
PRCOL_00001583 Prasinoderma coloniale HOM05D005394 ORTHO05D006909 6.5e-78 296.6 842 29.6
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 6.5e-78 296.6 856 29.6
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 1.4e-77 295.4 735 31.6
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 9.4e-77 292.7 695 31.9
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 9.4e-77 292.7 700 32.1
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 1.6e-76 292.0 700 32.1
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 2.3e-75 288.1 666 31.5
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 2.8e-73 281.2 736 30.8
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 9.1e-72 276.2 859 28.5
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 2.3e-67 261.5 663 31.1
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 4.4e-66 257.3 777 29.3
CAN.G2018.3 Capsicum annuum HOM05D005394 ORTHO05D006909 7.2e-61 240.0 616 30.2
MBI10_g36386_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 6.1e-52 210.3 353 37.1
Rhsim12G0008000 Rhododendron simsii HOM05D005394 ORTHO05D006909 2.0e-50 205.3 862 24.9
Cpa.g.sc2.203 Carica papaya HOM05D005394 ORTHO05D006909 5.5e-45 187.2 439 31.4
Actinidia12539 Actinidia chinensis HOM05D005394 ORTHO05D006909 3.1e-40 171.4 330 35.5
Actinidia25071 Actinidia chinensis HOM05D005394 ORTHO05D006909 2.1e-36 158.7 870 24.7
Cpa.g.sc2.200 Carica papaya HOM05D005394 ORTHO05D006909 1.2e-34 152.9 394 31.5
Actinidia12538 Actinidia chinensis HOM05D005394 ORTHO05D006909 2.6e-34 151.8 293 35.8
CDE09G0652 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 1.6e-31 142.5 296 34.5
MBI10_g36389_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 4.6e-31 141.0 248 34.3
Atru.chr6.2063 Acer truncatum HOM05D005394 ORTHO05D006909 2.5e-29 135.2 375 30.1
Oeu033979.1 Olea europaea HOM05D005394 ORTHO05D006909 2.3e-22 112.1 495 24.4
CSS0027861 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.2e-18 99.8 348 30.2
DCAR_032393 Daucus carota HOM05D005394 ORTHO05D011132 5.8e-18 97.4 149 37.6
Haze_13526 Corylus avellana HOM05D005394 ORTHO05D006909 7.5e-18 97.1 254 32.7
HanXRQChr14g0428721 Helianthus annuus HOM05D005394 ORTHO05D006909 1.7e-14 85.9 142 38.0
BcaB01g03482 Brassica carinata HOM05D005394 ORTHO05D006909 3.3e-13 81.6 141 37.6


User provided reference genes

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