Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G741 Micromonas commoda HOM05D007118 ORTHO05D008957 0.0e+00 1506.1 816 100.0
Mapoly0051s0046 Marchantia polymorpha HOM05D007118 ORTHO05D008957 4.4e-41 174.1 725 25.9
Rhsim08G0066600 Rhododendron simsii HOM05D007118 ORTHO05D008957 1.9e-39 168.7 589 28.5
PGR083G1725 Punica granatum HOM05D007118 ORTHO05D008957 6.0e-38 163.7 594 28.1
TAR374G0129 Trochodendron aralioides HOM05D007118 ORTHO05D008957 1.5e-36 159.1 585 27.9
Prupe.3G271300 Prunus persica HOM05D007118 ORTHO05D008957 3.3e-36 157.9 581 28.4
SHI04174 Sapria himalayana HOM05D007118 ORTHO05D008957 4.3e-36 157.5 608 27.8
TAR629G0502 Trochodendron aralioides HOM05D007118 ORTHO05D008957 7.3e-36 156.8 568 27.3
FAN14G3290 Fragaria x ananassa HOM05D007118 ORTHO05D008957 2.1e-35 155.2 568 27.1
CiPaw.03G029400 Carya illinoinensis HOM05D007118 ORTHO05D008957 2.8e-35 154.8 594 27.8
Haze_14577 Corylus avellana HOM05D007118 ORTHO05D008957 3.6e-35 154.5 602 27.7
Hund13237 Selenicereus undatus HOM05D007118 ORTHO05D008957 3.6e-35 154.5 589 25.6
Duzib147G0587 Durio zibethinus HOM05D007118 ORTHO05D008957 4.7e-35 154.1 563 28.1
FAN05G1119 Fragaria x ananassa HOM05D007118 ORTHO05D008957 6.2e-35 153.7 568 27.3
Potri.017G078700 Populus trichocarpa HOM05D007118 ORTHO05D008957 1.1e-34 152.9 763 24.4
Sabra17G0069800 Salix brachista HOM05D007118 ORTHO05D008957 1.4e-34 152.5 635 26.9
ATR1120G196 Amborella trichopoda HOM05D007118 ORTHO05D008957 2.3e-34 151.8 564 27.3
Potri.004G123900 Populus trichocarpa HOM05D007118 ORTHO05D008957 2.3e-34 151.8 588 26.9
Sc14g0006000 Simmondsia chinensis HOM05D007118 ORTHO05D008957 2.3e-34 151.8 568 26.6
Aqoxy3G00736 Aquilegia oxysepala HOM05D007118 ORTHO05D008957 3.1e-34 151.4 756 23.9
FvH4_6g49180 Fragaria vesca HOM05D007118 ORTHO05D008957 3.1e-34 151.4 568 27.1
PGSC0003DMG400018098 Solanum tuberosum HOM05D007118 ORTHO05D008957 3.1e-34 151.4 570 27.4
Lsat_1_v5_gn_2_88681 Lactuca sativa HOM05D007118 ORTHO05D008957 4.0e-34 151.0 569 27.6
Sopen02g032450 Solanum pennellii HOM05D007118 ORTHO05D008957 5.2e-34 150.6 570 27.4
FAN02G1928 Fragaria x ananassa HOM05D007118 ORTHO05D008957 6.8e-34 150.2 569 26.9
FAN09G1522 Fragaria x ananassa HOM05D007118 ORTHO05D008957 6.8e-34 150.2 568 26.9
MD09G1047700 Malus domestica HOM05D007118 ORTHO05D008957 6.8e-34 150.2 564 27.8
TWI60G1543 Tripterygium wilfordii HOM05D007118 ORTHO05D008957 6.8e-34 150.2 612 27.1
Carub.0005s0727 Capsella rubella HOM05D007118 ORTHO05D008957 8.9e-34 149.8 747 25.8
AUR62038867 Chenopodium quinoa HOM05D007118 ORTHO05D008957 8.9e-34 149.8 586 25.3
Solyc02g087720.1 Solanum lycopersicum HOM05D007118 ORTHO05D008957 8.9e-34 149.8 570 27.2
AagrBONN_evm.TU.Sc2ySwM_344.3877 Anthoceros agrestis HOM05D007118 ORTHO05D008957 1.2e-33 149.4 620 27.3
SalBow1G1856 Salvia bowleyana HOM05D007118 ORTHO05D008957 1.2e-33 149.4 570 27.0
CAN.G206.124 Capsicum annuum HOM05D007118 ORTHO05D008957 1.5e-33 149.1 571 27.8
Nn4g23068 Nelumbo nucifera HOM05D007118 ORTHO05D008957 2.0e-33 148.7 612 26.6
Peaxi162Scf00129g00042 Petunia axillaris HOM05D007118 ORTHO05D008957 2.0e-33 148.7 570 27.9
unitig_899.g15508 Utricularia gibba HOM05D007118 ORTHO05D008957 2.0e-33 148.7 610 25.7
Cfa007517 Carpinus fangiana HOM05D007118 ORTHO05D008957 2.6e-33 148.3 570 27.9
HanXRQChr14g0449321 Helianthus annuus HOM05D007118 ORTHO05D008957 2.6e-33 148.3 568 27.5
Os06g0584200 Oryza sativa ssp. japonica HOM05D007118 ORTHO05D008957 2.6e-33 148.3 631 27.3
CsaV3_3G041650 Cucumis sativus L. HOM05D007118 ORTHO05D008957 4.4e-33 147.5 537 27.4
Manes.15G176912 Manihot esculenta HOM05D007118 ORTHO05D008957 4.4e-33 147.5 629 27.2
Gohir.D09G021500 Gossypium hirsutum HOM05D007118 ORTHO05D008957 5.8e-33 147.1 583 27.8
MD17G1047800 Malus domestica HOM05D007118 ORTHO05D008957 5.8e-33 147.1 564 27.7
RcHm_v2.0_Chr2g0169061 Rosa chinensis HOM05D007118 ORTHO05D008957 7.5e-33 146.7 564 27.8
EL10Ac2g02939 Beta vulgaris HOM05D007118 ORTHO05D008957 9.9e-33 146.4 596 25.3
CSS0004252 Camellia sinensis var. sinensis HOM05D007118 ORTHO05D008957 9.9e-33 146.4 533 28.9
Gorai.006G025500 Gossypium raimondii HOM05D007118 ORTHO05D008957 9.9e-33 146.4 583 27.4
PRCOL_00001393 Prasinoderma coloniale HOM05D007118 ORTHO05D008957 9.9e-33 146.4 627 29.7
ClCG10G014860 Citrullus lanatus HOM05D007118 ORTHO05D008957 1.7e-32 145.6 528 26.9
A06p40390 Brassica napus HOM05D007118 ORTHO05D008957 2.2e-32 145.2 748 25.9
BraA06t26957Z Brassica rapa HOM05D007118 ORTHO05D008957 2.2e-32 145.2 748 25.9
MELO3C009888.2 Cucumis melo HOM05D007118 ORTHO05D008957 2.2e-32 145.2 537 27.2
Gohir.A09G022300 Gossypium hirsutum HOM05D007118 ORTHO05D008957 2.2e-32 145.2 583 27.3
QL02p080749 Quercus lobata HOM05D007118 ORTHO05D008957 2.2e-32 145.2 569 26.7
CBR_g8886 Chara braunii HOM05D007118 ORTHO05D008957 2.9e-32 144.8 766 25.3
AUR62031637 Chenopodium quinoa HOM05D007118 ORTHO05D008957 2.9e-32 144.8 578 25.1
Migut.H00894 Erythranthe guttata HOM05D007118 ORTHO05D008957 3.7e-32 144.4 528 28.4
Sed0001669 Sechium edule HOM05D007118 ORTHO05D008957 3.7e-32 144.4 537 27.4
TWI32G0076 Tripterygium wilfordii HOM05D007118 ORTHO05D008957 3.7e-32 144.4 638 26.0
CARHR151700 Cardamine hirsuta HOM05D007118 ORTHO05D008957 4.9e-32 144.1 651 26.6
SMO244G0043 Selaginella moellendorffii HOM05D007118 ORTHO05D008957 4.9e-32 144.1 560 28.0
DCAR_011156 Daucus carota HOM05D007118 ORTHO05D008957 8.3e-32 143.3 566 25.8
Lju41C25G1 Lonicera japonica HOM05D007118 ORTHO05D008957 8.3e-32 143.3 489 28.4
C07p37660 Brassica napus HOM05D007118 ORTHO05D008957 1.1e-31 142.9 753 26.0
BolC7t44283H Brassica oleracea HOM05D007118 ORTHO05D008957 1.1e-31 142.9 753 26.0
Oeu060923.1 Olea europaea HOM05D007118 ORTHO05D008957 1.1e-31 142.9 576 27.1
Actinidia10548 Actinidia chinensis HOM05D007118 ORTHO05D008957 1.9e-31 142.1 579 27.1
BcaC06g33635 Brassica carinata HOM05D001960 ORTHO05D008957 1.9e-31 142.1 635 26.5
SMO071G0001 Selaginella moellendorffii HOM05D007118 ORTHO05D008957 2.4e-31 141.7 560 27.9
Cpa.g.sc14.37 Carica papaya HOM05D007118 ORTHO05D008957 3.2e-31 141.4 597 27.1
TWI32G0789 Tripterygium wilfordii HOM05D007118 ORTHO05D008957 3.2e-31 141.4 634 26.7
Sp2g17370 Schrenkiella parvula HOM05D007118 ORTHO05D008957 4.1e-31 141.0 750 25.6
HPP92_003624 Vanilla planifolia HOM05D007118 ORTHO05D008957 4.1e-31 141.0 286 33.2
CANSAT64G2775 Cannabis sativa HOM05D007118 ORTHO05D008957 7.1e-31 140.2 525 27.8
Cc07_g03080 Coffea canephora HOM05D007118 ORTHO05D008957 2.1e-30 138.7 523 26.8
Dinv33727 Davidia involucrata HOM05D007118 ORTHO05D008957 2.1e-30 138.7 572 26.4
Phvul.004G026600 Phaseolus vulgaris HOM05D007118 ORTHO05D008957 2.1e-30 138.7 603 26.4
Lalb_Chr02g0159561 Lupinus albus HOM05D007118 ORTHO05D008957 2.7e-30 138.3 563 25.2
THA.LOC104805448 Tarenaya hassleriana HOM05D007118 ORTHO05D008957 2.7e-30 138.3 638 26.6
ECA238G0821 Erigeron canadensis HOM05D007118 ORTHO05D008957 3.5e-30 137.9 570 26.8
Glyma.19G020300 Glycine max HOM05D007118 ORTHO05D008957 3.5e-30 137.9 543 25.4
Lj2g0024860 Lotus japonicus HOM05D007118 ORTHO05D008957 6.0e-30 137.1 608 26.2
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 7.8e-30 136.7 529 26.8
Pp3c3_25440 Physcomitrium patens HOM05D007118 ORTHO05D008957 1.7e-29 135.6 522 26.6
Medtr6g011480 Medicago truncatula HOM05D007118 ORTHO05D008957 3.0e-29 134.8 577 25.1
CDE04G1934 Ceratophyllum demersum HOM05D007118 ORTHO05D008957 3.9e-29 134.4 591 26.2
Nitab4.5_0000564g0280 Nicotiana tabacum HOM05D007118 ORTHO05D008957 6.6e-29 133.7 263 32.7
PSO591G0390 Papaver somniferum HOM05D007118 ORTHO05D008957 1.5e-28 132.5 528 25.0
VMungo0464G1357 Vigna mungo HOM05D007118 ORTHO05D008957 1.9e-28 132.1 597 26.3
Atru.chr8.1899 Acer truncatum HOM05D007118 ORTHO05D008957 3.3e-28 131.3 624 25.3
PSO832G0362 Papaver somniferum HOM05D007118 ORTHO05D008957 3.3e-28 131.3 528 25.0
Thecc.04G076000 Theobroma cacao HOM05D007118 ORTHO05D008957 3.3e-28 131.3 284 32.4
Nitab4.5_0009739g0010 Nicotiana tabacum HOM05D007118 ORTHO05D008957 4.3e-28 131.0 224 33.5
Ciclev10011233m.g Citrus clementina HOM05D007118 ORTHO05D008957 5.6e-28 130.6 523 26.2
Zm00001eb385570 Zea mays HOM05D007118 ORTHO05D008957 9.5e-28 129.8 286 30.4
MSTRG.3219 Avicennia marina HOM05D007118 ORTHO05D008957 2.1e-27 128.6 509 27.7
AT3G28720 Arabidopsis thaliana HOM05D007118 ORTHO05D008957 4.7e-27 127.5 616 26.0
Ca_04268_v3 Cicer arietinum L. HOM05D007118 ORTHO05D008957 6.2e-27 127.1 564 24.8
Psat1g078560 Pisum sativum HOM05D007118 ORTHO05D008957 6.2e-27 127.1 597 24.5
TPR.G4266 Trifolium pratense HOM05D007118 ORTHO05D008957 1.4e-26 125.9 598 24.6
Cre02.g081650 Chlamydomonas reinhardtii HOM05D007118 ORTHO05D008957 2.0e-25 122.1 820 25.9
Aa31LG2G4490 Aethionema arabicum HOM05D007118 ORTHO05D008957 4.4e-25 120.9 531 24.9
Ah.12g065380 Amaranthus hybridus HOM05D007118 ORTHO05D008957 2.4e-23 115.2 553 24.1
SMO244G0004 Selaginella moellendorffii HOM05D007118 ORTHO05D008957 3.9e-21 107.8 229 29.7
SMO244G0083 Selaginella moellendorffii HOM05D007118 ORTHO05D008957 3.9e-21 107.8 229 29.7
SMO244G0031 Selaginella moellendorffii HOM05D007118 ORTHO05D008957 2.8e-19 101.7 229 28.8
Glyma.13G064602 Glycine max HOM05D007118 ORTHO05D008957 9.0e-18 96.7 226 29.2
COL.COLO4_08830 Corchorus olitorius HOM05D005244 ORTHO05D006539 7.9e-06 57.0 192 28.1


User provided reference genes

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