Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 5.0e-172 607.8 343 100.0
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 3.8e-26 123.2 355 28.2
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 8.4e-26 122.1 334 28.7
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.9e-25 120.9 309 30.7
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 1.9e-25 120.9 325 30.8
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 1.9e-25 120.9 314 30.3
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 2.4e-25 120.6 324 29.9
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 4.2e-25 119.8 308 28.6
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 5.4e-25 119.4 303 29.7
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 5.4e-25 119.4 348 28.2
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 9.3e-25 118.6 344 27.9
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 1.2e-24 118.2 349 28.1
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 1.6e-24 117.9 350 28.3
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.1e-24 117.5 306 29.1
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 2.1e-24 117.5 313 29.7
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 2.1e-24 117.5 343 29.7
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 2.7e-24 117.1 350 28.6
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 2.7e-24 117.1 324 29.6
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 3.5e-24 116.7 349 28.1
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 3.5e-24 116.7 353 27.8
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 3.5e-24 116.7 326 30.1
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 4.6e-24 116.3 323 29.1
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 7.8e-24 115.5 338 29.3
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 1.3e-23 114.8 358 28.5
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 1.3e-23 114.8 313 28.8
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.7e-23 114.4 350 29.1
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 1.7e-23 114.4 326 29.4
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 2.3e-23 114.0 350 29.1
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 3.0e-23 113.6 304 30.3
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 3.0e-23 113.6 312 29.2
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 3.9e-23 113.2 330 28.8
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 3.9e-23 113.2 355 27.0
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 3.9e-23 113.2 359 28.7
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 3.9e-23 113.2 320 28.1
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 5.1e-23 112.8 355 28.7
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 5.1e-23 112.8 365 27.4
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 6.6e-23 112.5 349 27.8
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 8.7e-23 112.1 327 29.7
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 1.1e-22 111.7 312 28.5
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 1.5e-22 111.3 319 28.5
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 1.9e-22 110.9 322 28.3
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 1.9e-22 110.9 310 27.7
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 2.5e-22 110.5 338 29.6
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 2.5e-22 110.5 327 28.7
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 3.3e-22 110.2 311 29.9
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 3.3e-22 110.2 311 29.9
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 3.3e-22 110.2 353 28.0
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 3.3e-22 110.2 355 28.5
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 4.3e-22 109.8 347 28.5
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 7.3e-22 109.0 330 29.4
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 7.3e-22 109.0 334 29.0
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 7.3e-22 109.0 339 27.7
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 9.6e-22 108.6 333 28.5
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 9.6e-22 108.6 352 27.6
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 1.3e-21 108.2 314 29.6
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.3e-21 108.2 315 28.9
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 2.8e-21 107.1 333 29.1
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 2.8e-21 107.1 320 31.2
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 2.8e-21 107.1 338 27.5
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 3.6e-21 106.7 364 28.8
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 4.8e-21 106.3 344 29.4
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 1.1e-20 105.1 338 28.7
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 1.4e-20 104.8 333 27.3
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 1.4e-20 104.8 373 26.8
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 1.4e-20 104.8 323 29.4
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 1.4e-20 104.8 350 27.1
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 1.4e-20 104.8 320 28.1
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 1.8e-20 104.4 331 27.8
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 1.8e-20 104.4 329 29.2
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 2.4e-20 104.0 357 27.5
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 2.4e-20 104.0 347 28.8
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 4.0e-20 103.2 305 30.2
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 5.3e-20 102.8 354 30.2
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 6.9e-20 102.4 355 27.0
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 6.9e-20 102.4 312 27.6
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 9.0e-20 102.1 312 28.8
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 9.0e-20 102.1 340 26.8
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 1.2e-19 101.7 335 28.4
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.5e-19 101.3 309 27.8
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 1.5e-19 101.3 314 31.5
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 2.0e-19 100.9 335 28.1
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.6e-19 100.5 309 27.2
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.6e-19 100.5 309 26.9
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 3.4e-19 100.1 312 27.9
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 4.4e-19 99.8 333 27.6
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 5.8e-19 99.4 330 28.8
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 5.8e-19 99.4 340 27.1
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 7.6e-19 99.0 333 27.3
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 7.6e-19 99.0 335 28.4
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.3e-18 98.2 314 27.7
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 1.3e-18 98.2 354 26.0
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 1.7e-18 97.8 343 25.9
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 1.7e-18 97.8 315 26.7
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 2.2e-18 97.4 330 27.3
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.9e-18 97.1 309 26.9
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 1.1e-17 95.1 346 29.2
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 1.4e-17 94.7 317 26.2
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 5.4e-17 92.8 314 30.6
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 7.1e-17 92.4 339 28.9
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.0e-16 89.4 316 30.1
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 1.0e-15 88.6 314 30.3
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 5.1e-15 86.3 267 28.1
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 1.5e-14 84.7 398 27.4
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 3.3e-14 83.6 135 38.5
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 3.3e-14 83.6 343 24.5
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 5.6e-14 82.8 286 27.3
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.6e-13 81.3 135 34.8
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 1.8e-12 77.8 129 36.4
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 6.9e-12 75.9 144 34.7
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 6.9e-12 75.9 133 37.6
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 6.9e-12 75.9 315 22.5
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 2.0e-11 74.3 295 27.8
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 5.8e-11 72.8 125 36.0
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 1.3e-10 71.6 106 38.7


User provided reference genes

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