Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G606 Micromonas commoda HOM05D006997 ORTHO05D008713 7.1e-270 933.3 463 100.0
MCO07G662 Micromonas commoda HOM05D006997 ORTHO05D008713 9.4e-206 720.3 399 88.2
Cre12.g558400 Chlamydomonas reinhardtii HOM05D006997 ORTHO05D008713 9.8e-54 215.3 366 34.4
Mapoly0028s0040 Marchantia polymorpha HOM05D006997 ORTHO05D008713 3.7e-53 213.4 368 32.3
THA.LOC104806793 Tarenaya hassleriana HOM05D006997 ORTHO05D008713 9.2e-52 208.8 369 32.5
HanXRQChr02g0039281 Helianthus annuus HOM05D006997 ORTHO05D008713 2.0e-51 207.6 375 32.0
ECA247G1028 Erigeron canadensis HOM05D006997 ORTHO05D008713 2.7e-51 207.2 375 32.0
PRCOL_00000168 Prasinoderma coloniale HOM05D006997 ORTHO05D008713 2.7e-51 207.2 367 33.2
Medtr5g099370 Medicago truncatula HOM05D006997 ORTHO05D008713 3.5e-51 206.8 377 31.8
Potri.002G100700 Populus trichocarpa HOM05D006997 ORTHO05D008713 4.6e-51 206.5 377 31.6
Duzib093G0368 Durio zibethinus HOM05D006997 ORTHO05D008713 5.9e-51 206.1 363 32.2
Pp3c2_7910 Physcomitrium patens HOM05D006997 ORTHO05D008713 5.9e-51 206.1 380 31.6
Thecc.08G101800 Theobroma cacao HOM05D006997 ORTHO05D008713 5.9e-51 206.1 375 32.0
Lj1g0014637 Lotus japonicus HOM05D006997 ORTHO05D008713 7.8e-51 205.7 367 32.4
Actinidia10345 Actinidia chinensis HOM05D006997 ORTHO05D008713 1.3e-50 204.9 363 32.5
Ciclev10001423m.g Citrus clementina HOM05D006997 ORTHO05D008713 1.3e-50 204.9 375 31.7
Gorai.002G141200 Gossypium raimondii HOM05D006997 ORTHO05D008713 1.3e-50 204.9 375 31.7
arahy.Tifrunner.gnm1.ann1.2V06JV Arachis hypogaea HOM05D006997 ORTHO05D008713 1.7e-50 204.5 351 33.0
arahy.Tifrunner.gnm1.ann1.50RG73 Arachis hypogaea HOM05D006997 ORTHO05D008713 1.7e-50 204.5 351 33.0
GSVIVG01009084001 Vitis vinifera HOM05D006997 ORTHO05D008713 1.7e-50 204.5 377 31.6
SalBow1G8133 Salvia bowleyana HOM05D006997 ORTHO05D008713 2.3e-50 204.1 378 31.7
HPP92_005985 Vanilla planifolia HOM05D006997 ORTHO05D008713 2.3e-50 204.1 362 32.3
Duzib116G0677 Durio zibethinus HOM05D006997 ORTHO05D008713 3.0e-50 203.8 375 31.7
TPR.G18644 Trifolium pratense HOM05D006997 ORTHO05D008713 3.0e-50 203.8 375 31.5
Atru.chr13.1117 Acer truncatum HOM05D006997 ORTHO05D008713 3.9e-50 203.4 363 32.0
Gohir.A01G132700 Gossypium hirsutum HOM05D006997 ORTHO05D008713 3.9e-50 203.4 375 31.5
Lalb_Chr08g0242211 Lupinus albus HOM05D006997 ORTHO05D008713 3.9e-50 203.4 376 31.9
CiPaw.15G045900 Carya illinoinensis HOM05D006997 ORTHO05D008713 5.0e-50 203.0 377 31.0
Migut.O00787 Erythranthe guttata HOM05D006997 ORTHO05D008713 6.6e-50 202.6 376 31.4
RcHm_v2.0_Chr3g0492071 Rosa chinensis HOM05D006997 ORTHO05D008713 6.6e-50 202.6 363 32.0
Haze_18264 Corylus avellana HOM05D006997 ORTHO05D008713 8.6e-50 202.2 377 31.0
Migut.N02878 Erythranthe guttata HOM05D006997 ORTHO05D008713 8.6e-50 202.2 397 31.5
Glyma.04G099000 Glycine max HOM05D006997 ORTHO05D008713 8.6e-50 202.2 363 32.2
PSO170G4713 Papaver somniferum HOM05D006997 ORTHO05D008713 8.6e-50 202.2 351 32.8
PGR042G3947 Punica granatum HOM05D006997 ORTHO05D008713 8.6e-50 202.2 378 31.2
MD08G1188600 Malus domestica HOM05D006997 ORTHO05D008713 1.1e-49 201.8 375 31.5
Prupe.1G523100 Prunus persica HOM05D006997 ORTHO05D008713 1.5e-49 201.4 375 30.9
Cc10_g06680 Coffea canephora HOM05D006997 ORTHO05D008713 1.9e-49 201.1 351 32.5
Manes.02G149000 Manihot esculenta HOM05D006997 ORTHO05D008713 1.9e-49 201.1 375 31.2
TWI56G0051 Tripterygium wilfordii HOM05D006997 ORTHO05D008713 1.9e-49 201.1 363 32.0
CANSAT54G2489 Cannabis sativa HOM05D006997 ORTHO05D008713 2.5e-49 200.7 375 31.2
TAR381G0945 Trochodendron aralioides HOM05D006997 ORTHO05D008713 2.5e-49 200.7 363 31.7
VMungo1309G1562 Vigna mungo HOM05D006997 ORTHO05D008713 2.5e-49 200.7 351 32.8
Actinidia30795 Actinidia chinensis HOM05D006997 ORTHO05D008713 3.3e-49 200.3 379 31.7
CsaV3_3G047700 Cucumis sativus L. HOM05D006997 ORTHO05D008713 3.3e-49 200.3 378 30.7
FvH4_5g36560 Fragaria vesca HOM05D006997 ORTHO05D008713 3.3e-49 200.3 363 31.7
Glyma.06G100700 Glycine max HOM05D006997 ORTHO05D008713 3.3e-49 200.3 363 32.2
Phvul.009G033100 Phaseolus vulgaris HOM05D006997 ORTHO05D008713 3.3e-49 200.3 363 32.2
AagrBONN_evm.TU.Sc2ySwM_228.3329 Anthoceros agrestis HOM05D006997 ORTHO05D008713 4.3e-49 199.9 363 32.5
FAN13G2131 Fragaria x ananassa HOM05D006997 ORTHO05D008713 4.3e-49 199.9 365 32.3
SMO203G0247 Selaginella moellendorffii HOM05D006997 ORTHO05D008713 4.3e-49 199.9 369 32.2
Lj4C96G9 Lonicera japonica HOM05D006997 ORTHO05D008713 7.3e-49 199.1 351 32.5
PSO447G0258 Papaver somniferum HOM05D006997 ORTHO05D008713 9.5e-49 198.7 351 32.8
Lsat_1_v5_gn_1_3100 Lactuca sativa HOM05D006997 ORTHO05D008713 1.2e-48 198.4 375 30.9
MELO3C003553.2 Cucumis melo HOM05D006997 ORTHO05D008713 1.6e-48 198.0 363 31.1
Hma1.2p1_1613F.1_g293656 Hydrangea macrophylla HOM05D006997 ORTHO05D008713 1.6e-48 198.0 363 31.4
QL02p002364 Quercus lobata HOM05D006997 ORTHO05D008713 1.6e-48 198.0 363 31.1
Eucgr.F00379 Eucalyptus grandis HOM05D006997 ORTHO05D008713 2.1e-48 197.6 363 31.7
MBI02_g10710_MAGBIO Magnolia biondii HOM05D006997 ORTHO05D008713 2.1e-48 197.6 351 32.5
Sed0013982 Sechium edule HOM05D006997 ORTHO05D008713 2.1e-48 197.6 366 31.1
FAN08G2563 Fragaria x ananassa HOM05D006997 ORTHO05D008713 3.6e-48 196.8 363 31.1
FAN18G0565 Fragaria x ananassa HOM05D006997 ORTHO05D008713 3.6e-48 196.8 365 31.8
Rhsim06G0078000 Rhododendron simsii HOM05D006997 ORTHO05D008713 3.6e-48 196.8 392 30.9
Peaxi162Scf00030g02415 Petunia axillaris HOM05D006997 ORTHO05D008713 4.7e-48 196.4 377 30.8
Sopen04g029680 Solanum pennellii HOM05D006997 ORTHO05D008713 1.0e-47 195.3 363 31.4
Nn5g29994 Nelumbo nucifera HOM05D006997 ORTHO05D008713 1.4e-47 194.9 357 32.2
PSO700G0253 Papaver somniferum HOM05D006997 ORTHO05D008713 1.4e-47 194.9 360 32.2
Solyc04g074710.3 Solanum lycopersicum HOM05D006997 ORTHO05D008713 1.4e-47 194.9 363 31.4
Nitab4.5_0005108g0030 Nicotiana tabacum HOM05D006997 ORTHO05D008713 1.8e-47 194.5 379 30.3
Nitab4.5_0000786g0050 Nicotiana tabacum HOM05D006997 ORTHO05D008713 2.3e-47 194.1 363 31.7
arahy.Tifrunner.gnm1.ann1.M6BDRX Arachis hypogaea HOM05D006997 ORTHO05D008713 4.0e-47 193.4 361 32.1
ClCG11G014320 Citrullus lanatus HOM05D006997 ORTHO05D008713 8.9e-47 192.2 378 30.4
ATR0684G208 Amborella trichopoda HOM05D006997 ORTHO05D008713 1.2e-46 191.8 346 32.1
PGSC0003DMG400030838 Solanum tuberosum HOM05D006997 ORTHO05D008713 1.2e-46 191.8 363 30.9
CAN.G857.15 Capsicum annuum HOM05D006997 ORTHO05D008713 2.0e-46 191.0 363 30.6
CSS0033006 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 1.3e-45 188.3 346 31.8
Ca_20316_v3 Cicer arietinum L. HOM05D006997 ORTHO05D008713 8.3e-45 185.7 332 31.6
MCO01G675 Micromonas commoda HOM05D006997 ORTHO05D008713 5.4e-44 183.0 390 30.0
Hund26989 Selenicereus undatus HOM05D006997 ORTHO05D008713 1.7e-42 177.9 336 31.5
Aqoxy5G01920 Aquilegia oxysepala HOM05D006997 ORTHO05D008713 3.0e-42 177.2 332 31.0
arahy.Tifrunner.gnm1.ann1.I3UG1J Arachis hypogaea HOM05D006997 ORTHO05D008713 1.1e-41 175.3 379 29.6
vmacro21291 Vaccinium macrocarpon HOM05D006997 ORTHO05D008713 5.6e-41 172.9 439 27.1
Dinv07073 Davidia involucrata HOM05D006997 ORTHO05D008713 8.3e-37 159.1 271 32.5
arahy.Tifrunner.gnm1.ann1.I4BPU4 Arachis hypogaea HOM05D006997 ORTHO05D008713 1.4e-36 158.3 326 30.4
SGA_v2.0_scaffold28G11904 Striga asiatica HOM05D006997 ORTHO05D008713 2.3e-34 151.0 449 24.9
Psat2g000280 Pisum sativum HOM05D006997 ORTHO05D008713 6.2e-32 142.9 291 30.2
MD15G1376400 Malus domestica HOM05D006997 ORTHO05D008713 1.4e-31 141.7 363 26.4
CBR_g19661 Chara braunii HOM05D006997 ORTHO05D008713 2.3e-31 141.0 317 30.6
CSS0036565 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 6.8e-31 139.4 249 32.1
arahy.Tifrunner.gnm1.ann1.R22A6K Arachis hypogaea HOM05D006997 ORTHO05D008713 2.0e-30 137.9 221 34.8
Cpa.g.sc36.182 Carica papaya HOM05D006997 ORTHO05D008713 3.4e-30 137.1 246 32.1
SHI35102 Sapria himalayana HOM05D006997 ORTHO05D008713 4.9e-29 133.3 286 30.4
arahy.Tifrunner.gnm1.ann1.U0EC22 Arachis hypogaea HOM05D006997 ORTHO05D008713 7.8e-27 125.9 351 26.5
Oeu029744.1 Olea europaea HOM05D006997 ORTHO05D008713 2.3e-26 124.4 212 32.1
Zm00001eb313370 Zea mays HOM05D006997 ORTHO05D008713 2.1e-24 117.9 200 32.5
COL.COLO4_12006 Corchorus olitorius HOM05D006997 ORTHO05D008713 6.4e-21 106.3 210 30.0
Gohir.D01G115600 Gossypium hirsutum HOM05D006997 ORTHO05D008713 1.1e-20 105.5 210 30.0
DCAR_012882 Daucus carota HOM05D006997 ORTHO05D008713 5.4e-20 103.2 224 29.5
Pp3c17_10270 Physcomitrium patens HOM05D007440 ORTHO05D009418 8.7e-18 95.9 405 23.5
PSO170G3813 Papaver somniferum HOM05D007440 ORTHO05D009418 1.5e-14 85.1 281 27.4
Potri.019G076200 Populus trichocarpa HOM05D007440 ORTHO05D009418 2.0e-14 84.7 375 23.5
Os09g0469900 Oryza sativa ssp. japonica HOM05D006997 ORTHO05D008713 1.3e-13 82.0 96 38.5
arahy.Tifrunner.gnm1.ann1.L1DSY1 Arachis hypogaea HOM05D006997 ORTHO05D008713 1.7e-13 81.6 183 27.3
Ciclev10024582m.g Citrus clementina HOM05D007440 ORTHO05D009418 1.1e-12 79.0 189 29.1
Aa31LG4G9050 Aethionema arabicum HOM05D007440 ORTHO05D009418 1.9e-12 78.2 183 28.4
Sabra19G0086600 Salix brachista HOM05D007440 ORTHO05D009418 4.2e-12 77.0 384 24.0
Lsat_1_v5_gn_1_25281 Lactuca sativa HOM05D007440 ORTHO05D009418 2.1e-11 74.7 362 22.7
HanXRQChr02g0037061 Helianthus annuus HOM05D007440 ORTHO05D009418 4.6e-11 73.6 371 21.6
THA.LOC104810378 Tarenaya hassleriana HOM05D007440 ORTHO05D009418 1.8e-10 71.6 268 25.0
SMO347G0497 Selaginella moellendorffii HOM05D007440 ORTHO05D009418 3.9e-10 70.5 163 30.1
ECA247G2087 Erigeron canadensis HOM05D007440 ORTHO05D009418 5.1e-10 70.1 250 24.4
RcHm_v2.0_Chr7g0242241 Rosa chinensis HOM05D006997 ORTHO05D008713 6.7e-10 69.7 109 34.9
Peaxi162Scf00017g00002 Petunia axillaris HOM05D007440 ORTHO05D009418 1.5e-06 58.5 123 29.3


User provided reference genes

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