Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G492 Micromonas commoda HOM05D000001 ORTHO05D009286 2.4e-170 602.1 300 100.0
CBR_g31147 Chara braunii HOM05D000001 ORTHO05D009286 1.6e-33 147.5 300 36.3
Mapoly0074s0078 Marchantia polymorpha HOM05D000001 ORTHO05D009286 2.9e-30 136.7 283 36.4
AagrBONN_evm.TU.Sc2ySwM_344.2674 Anthoceros agrestis HOM05D000001 ORTHO05D009286 2.7e-28 130.2 255 35.3
CsaV3_2G005310 Cucumis sativus L. HOM05D000001 ORTHO05D009286 3.9e-27 126.3 275 34.9
Sed0027835 Sechium edule HOM05D000001 ORTHO05D009286 3.9e-27 126.3 281 35.2
Pp3c27_1510 Physcomitrium patens HOM05D000001 ORTHO05D009286 1.1e-26 124.8 256 34.8
Zm00001eb287490 Zea mays HOM05D000001 ORTHO05D009286 1.1e-26 124.8 296 34.1
ClCG02G015790 Citrullus lanatus HOM05D000001 ORTHO05D009286 1.9e-26 124.0 284 34.2
MELO3C004256.2 Cucumis melo HOM05D000001 ORTHO05D009286 9.6e-26 121.7 275 34.9
Gorai.007G297100 Gossypium raimondii HOM05D000001 ORTHO05D009286 3.6e-25 119.8 280 35.0
MBI17_g31750_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009286 3.6e-25 119.8 273 34.4
Thecc.05G303100 Theobroma cacao HOM05D000001 ORTHO05D009286 3.6e-25 119.8 281 34.5
Nn1g02236 Nelumbo nucifera HOM05D000001 ORTHO05D009286 1.1e-24 118.2 256 33.6
Gohir.D11G275300 Gossypium hirsutum HOM05D000001 ORTHO05D009286 1.4e-24 117.9 280 35.0
TAR362G0463 Trochodendron aralioides HOM05D000001 ORTHO05D009286 1.4e-24 117.9 268 34.7
Ciclev10002196m.g Citrus clementina HOM05D000001 ORTHO05D009286 1.8e-24 117.5 262 33.6
Gohir.A11G265100 Gossypium hirsutum HOM05D000001 ORTHO05D009286 2.4e-24 117.1 280 34.6
THA.LOC104821713 Tarenaya hassleriana HOM05D000001 ORTHO05D009286 3.1e-24 116.7 258 34.1
Actinidia23635 Actinidia chinensis HOM05D000001 ORTHO05D009286 4.0e-24 116.3 265 33.6
QL03p007002 Quercus lobata HOM05D000001 ORTHO05D009286 4.0e-24 116.3 257 33.5
Dinv40288 Davidia involucrata HOM05D000001 ORTHO05D009286 5.2e-24 115.9 254 33.5
RhsimUnG0226000 Rhododendron simsii HOM05D000001 ORTHO05D009286 6.9e-24 115.5 252 35.3
Lalb_Chr18g0045641 Lupinus albus HOM05D000001 ORTHO05D009286 3.4e-23 113.2 255 34.1
MD12G1219200 Malus domestica HOM05D000001 ORTHO05D009286 5.8e-23 112.5 260 33.8
TWI12G0446 Tripterygium wilfordii HOM05D000001 ORTHO05D009286 5.8e-23 112.5 265 32.5
Atru.chr2.405 Acer truncatum HOM05D000001 ORTHO05D009286 7.6e-23 112.1 272 32.4
vmacro05020 Vaccinium macrocarpon HOM05D000001 ORTHO05D009286 1.3e-22 111.3 256 35.9
CSS0009057 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D009286 1.7e-22 110.9 263 33.8
Hund07071 Selenicereus undatus HOM05D000001 ORTHO05D009286 1.7e-22 110.9 284 32.7
CiPaw.07G017900 Carya illinoinensis HOM05D000001 ORTHO05D009286 2.2e-22 110.5 263 31.9
Haze_04195 Corylus avellana HOM05D000001 ORTHO05D009582 2.9e-22 110.2 277 31.4
RcHm_v2.0_Chr3g0454761 Rosa chinensis HOM05D000001 ORTHO05D009286 2.9e-22 110.2 278 33.1
SMO367G0812 Selaginella moellendorffii HOM05D000001 ORTHO05D009286 3.8e-22 109.8 258 34.1
FAN06G3148 Fragaria x ananassa HOM05D000001 ORTHO05D009286 4.9e-22 109.4 277 35.0
Prupe.6G325800 Prunus persica HOM05D000001 ORTHO05D009286 6.4e-22 109.0 242 34.3
Potri.013G021000 Populus trichocarpa HOM05D000001 ORTHO05D009286 1.1e-21 108.2 268 32.5
GSVIVG01000053001 Vitis vinifera HOM05D000001 ORTHO05D009286 1.1e-21 108.2 254 33.1
FvH4_7g03590 Fragaria vesca HOM05D000001 ORTHO05D009286 1.4e-21 107.8 277 34.7
Glyma.03G237900 Glycine max HOM05D000001 ORTHO05D009286 1.4e-21 107.8 274 32.1
Peaxi162Scf00037g00631 Petunia axillaris HOM05D000001 ORTHO05D009286 1.4e-21 107.8 255 34.1
SalBow8G4411 Salvia bowleyana HOM05D000001 ORTHO05D009286 1.9e-21 107.5 303 30.4
DCAR_024833 Daucus carota HOM05D000001 ORTHO05D009286 2.4e-21 107.1 265 31.7
Manes.09G167201 Manihot esculenta HOM05D000001 ORTHO05D009286 2.4e-21 107.1 262 32.1
Duzib177G1137 Durio zibethinus HOM05D000001 ORTHO05D009582 3.2e-21 106.7 240 33.8
HPP92_013683 Vanilla planifolia HOM05D000001 ORTHO05D009286 3.2e-21 106.7 267 32.2
COL.COLO4_13469 Corchorus olitorius HOM05D000001 ORTHO05D009286 5.4e-21 105.9 254 33.1
Medtr7g113530 Medicago truncatula HOM05D000001 ORTHO05D009286 5.4e-21 105.9 255 31.4
Cc02_g33430 Coffea canephora HOM05D000001 ORTHO05D009286 9.3e-21 105.1 255 34.5
Ca_09356_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009286 1.2e-20 104.8 278 30.9
Nitab4.5_0000137g0060 Nicotiana tabacum HOM05D000001 ORTHO05D009286 1.2e-20 104.8 281 32.0
VMungo0540G1561 Vigna mungo HOM05D000001 ORTHO05D009286 1.2e-20 104.8 261 32.2
MSTRG.16965 Avicennia marina HOM05D000001 ORTHO05D009286 2.1e-20 104.0 272 30.5
Eucgr.B01968 Eucalyptus grandis HOM05D000001 ORTHO05D009286 2.7e-20 103.6 253 32.4
Lj1g0025628 Lotus japonicus HOM05D000001 ORTHO05D009286 3.5e-20 103.2 270 31.5
Solyc01g099260.3 Solanum lycopersicum HOM05D000001 ORTHO05D009286 3.5e-20 103.2 276 32.6
Sopen01g042810 Solanum pennellii HOM05D000001 ORTHO05D009286 3.5e-20 103.2 276 32.6
arahy.Tifrunner.gnm1.ann1.N2G7N8 Arachis hypogaea HOM05D000001 ORTHO05D009286 4.6e-20 102.8 264 30.3
Phvul.006G091900 Phaseolus vulgaris HOM05D000001 ORTHO05D009286 6.0e-20 102.4 301 30.9
Oeu017485.1 Olea europaea HOM05D000001 ORTHO05D009286 1.3e-19 101.3 258 31.8
Sc06g0003290 Simmondsia chinensis HOM05D000001 ORTHO05D009286 1.3e-19 101.3 266 30.1
EL10Ac6g14022 Beta vulgaris HOM05D000001 ORTHO05D009286 1.7e-19 100.9 252 31.0
CDE05G2030 Ceratophyllum demersum HOM05D000001 ORTHO05D009286 1.7e-19 100.9 258 30.6
PGSC0003DMG400024697 Solanum tuberosum HOM05D000001 ORTHO05D009286 1.7e-19 100.9 276 31.2
Aqoxy2G03342 Aquilegia oxysepala HOM05D000001 ORTHO05D009286 2.3e-19 100.5 246 31.7
ATR0030G028 Amborella trichopoda HOM05D000001 ORTHO05D009286 3.0e-19 100.1 257 33.5
HanXRQChr03g0071681 Helianthus annuus HOM05D000001 ORTHO05D009286 3.0e-19 100.1 242 31.8
CAN.G1034.26 Capsicum annuum HOM05D000001 ORTHO05D009286 3.9e-19 99.8 254 32.3
Nitab4.5_0003156g0050 Nicotiana tabacum HOM05D000001 ORTHO05D009286 3.9e-19 99.8 254 31.9
PSO302G0274 Papaver somniferum HOM05D000001 ORTHO05D009286 5.1e-19 99.4 236 29.7
ECA240G0839 Erigeron canadensis HOM05D000001 ORTHO05D009286 6.6e-19 99.0 243 30.5
unitig_747.g21349 Utricularia gibba HOM05D000001 ORTHO05D009286 6.6e-19 99.0 281 32.0
Psat3g010960 Pisum sativum HOM05D000001 ORTHO05D009286 1.1e-18 98.2 258 29.8
CANSAT78G1766 Cannabis sativa HOM05D000001 ORTHO05D009286 5.6e-18 95.9 270 31.1
Migut.B01034 Erythranthe guttata HOM05D000001 ORTHO05D009286 5.6e-18 95.9 247 30.4
CANSAT78G0322 Cannabis sativa HOM05D000001 ORTHO05D009286 9.6e-18 95.1 270 31.1
AT3G05345 Arabidopsis thaliana HOM05D000001 ORTHO05D009286 1.3e-17 94.7 258 30.6
AUR62014152 Chenopodium quinoa HOM05D000001 ORTHO05D009286 1.3e-17 94.7 266 30.1
PSO170G4485 Papaver somniferum HOM05D000001 ORTHO05D009286 6.2e-17 92.4 236 28.8
Eucgr.B01873 Eucalyptus grandis HOM05D000001 ORTHO05D009286 8.1e-17 92.0 167 37.7
Sp3g04210 Schrenkiella parvula HOM05D000001 ORTHO05D009286 8.1e-17 92.0 259 29.7
Carub.0003s0462 Capsella rubella HOM05D000001 ORTHO05D009286 2.4e-16 90.5 258 29.1
PGR083G0578 Punica granatum HOM05D000001 ORTHO05D009286 2.4e-16 90.5 264 28.4
SGA_v2.0_scaffold172G38993 Striga asiatica HOM05D000001 ORTHO05D009286 2.4e-16 90.5 260 29.6
arahy.Tifrunner.gnm1.ann1.LJ09F6 Arachis hypogaea HOM05D000001 ORTHO05D009286 3.1e-16 90.1 229 31.4
CARHR079690 Cardamine hirsuta HOM05D000001 ORTHO05D009286 4.0e-16 89.7 259 29.7
Sabra13G0023400 Salix brachista HOM05D000001 ORTHO05D009286 4.0e-16 89.7 246 30.9
BraSC132t45509Z Brassica rapa HOM05D000001 ORTHO05D009286 5.3e-16 89.4 254 28.3
BNapus_Darmor_BZH_scaffold_114p00160 Brassica napus HOM05D000001 ORTHO05D009286 6.9e-16 89.0 254 28.3
Aa31LG5G15720 Aethionema arabicum HOM05D000141 ORTHO05D001311 9.0e-16 88.6 239 30.5
Cfa006590 Carpinus fangiana HOM05D000001 ORTHO05D009582 2.0e-15 87.4 209 33.0
FAN03G0753 Fragaria x ananassa HOM05D000001 ORTHO05D009286 2.6e-15 87.0 290 30.0
AUR62038496 Chenopodium quinoa HOM05D000001 ORTHO05D009286 7.1e-13 79.0 215 29.3
AL3G15790 Arabidopsis lyrata HOM05D000001 ORTHO05D009286 3.5e-12 76.6 233 29.2
BcaC05g30155 Brassica carinata HOM05D000001 ORTHO05D009286 7.4e-10 68.9 168 32.1
TPR.G18990 Trifolium pratense HOM05D000001 ORTHO05D009286 1.1e-08 65.1 98 37.8
Lj9C80T2 Lonicera japonica HOM05D000001 ORTHO05D009286 3.4e-07 60.1 133 33.1
TPR.G33241 Trifolium pratense HOM05D000001 ORTHO05D009286 5.8e-07 59.3 140 32.9


User provided reference genes

Program Settings