Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 7.4e-220 766.9 393 100.0
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 7.1e-45 185.7 307 41.4
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 3.5e-44 183.3 303 41.6
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 7.8e-44 182.2 366 37.2
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 1.5e-42 177.9 295 41.4
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 4.3e-42 176.4 354 39.3
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 5.6e-42 176.0 296 41.6
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 1.2e-41 174.9 368 38.0
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 2.1e-41 174.1 357 38.4
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 2.8e-41 173.7 357 37.8
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 3.6e-41 173.3 390 36.2
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 4.7e-41 172.9 353 38.8
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 1.4e-40 171.4 368 37.2
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 4.0e-40 169.9 364 36.8
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 6.8e-40 169.1 362 36.7
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 8.9e-40 168.7 365 37.3
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 1.5e-39 167.9 371 36.4
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 1.5e-39 167.9 362 36.5
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.0e-39 167.5 363 37.7
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.6e-39 167.2 365 38.1
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 3.4e-39 166.8 368 37.0
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 5.8e-39 166.0 365 38.1
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 5.8e-39 166.0 391 35.0
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 9.9e-39 165.2 371 35.3
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 1.7e-38 164.5 384 36.2
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 1.7e-38 164.5 312 40.4
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 2.2e-38 164.1 366 36.3
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 2.9e-38 163.7 361 35.5
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 6.4e-38 162.5 349 36.4
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 8.4e-38 162.2 395 34.4
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 1.1e-37 161.8 369 36.0
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 1.1e-37 161.8 365 36.7
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 1.1e-37 161.8 325 39.4
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.4e-37 161.4 396 35.1
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 1.4e-37 161.4 378 35.2
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 5.4e-37 159.5 391 35.8
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 1.2e-36 158.3 360 35.3
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 1.2e-36 158.3 386 35.8
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 3.5e-36 156.8 393 34.4
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 3.5e-36 156.8 369 35.2
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 4.6e-36 156.4 370 34.6
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 7.8e-36 155.6 314 37.3
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 7.8e-36 155.6 369 35.2
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 2.3e-35 154.1 367 34.6
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 2.3e-35 154.1 359 35.1
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 2.3e-35 154.1 363 35.5
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 3.9e-35 153.3 359 35.1
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 5.1e-35 152.9 314 36.6
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 5.1e-35 152.9 396 34.1
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 8.7e-35 152.1 348 35.3
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 1.9e-34 151.0 365 34.8
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 2.1e-33 147.5 365 34.8
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 2.1e-33 147.5 365 34.8
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 2.1e-33 147.5 362 34.5
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 2.1e-33 147.5 366 34.7
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 2.8e-33 147.1 360 35.8
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 3.6e-33 146.7 364 34.6
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 6.2e-33 146.0 366 34.4
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 6.2e-33 146.0 365 34.8
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 1.1e-32 145.2 370 34.6
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 2.4e-32 144.1 180 47.2
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 6.9e-32 142.5 390 31.3
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 6.9e-32 142.5 390 31.3
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 6.9e-32 142.5 279 38.4
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 9.0e-32 142.1 362 34.0
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 2.0e-31 141.0 363 34.2
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 2.6e-31 140.6 358 33.0
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 3.4e-31 140.2 390 31.0
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 5.8e-31 139.4 391 31.7
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 1.7e-30 137.9 368 33.4
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 1.7e-30 137.9 363 33.9
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 8.4e-30 135.6 277 36.8
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 2.4e-29 134.0 359 32.9
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 3.2e-29 133.7 306 37.6
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 3.2e-29 133.7 366 33.6
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 9.3e-29 132.1 167 46.1
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 2.1e-28 131.0 385 31.2
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 6.0e-28 129.4 322 33.9
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 2.3e-27 127.5 300 35.7
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 3.0e-27 127.1 366 33.3
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 3.9e-27 126.7 361 33.2
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 1.9e-26 124.4 181 41.4
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 1.9e-26 124.4 307 35.2
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 2.5e-26 124.0 365 30.7
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 1.3e-25 121.7 312 35.3
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 4.0e-24 116.7 371 30.7
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 9.0e-24 115.5 367 30.8
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 9.0e-24 115.5 166 41.6
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 9.0e-24 115.5 181 39.2
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 5.8e-23 112.8 313 34.8
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 2.9e-22 110.5 239 36.0
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 9.3e-21 105.5 122 46.7
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 3.9e-19 100.1 106 55.7
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 1.1e-18 98.6 346 29.8
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 7.4e-18 95.9 346 29.8
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 4.0e-16 90.1 298 31.5
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 3.8e-14 83.6 325 30.8
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 2.4e-13 80.9 143 37.8
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 2.3e-11 74.3 84 52.4
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 1.5e-10 71.6 162 37.0
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 4.3e-10 70.1 256 27.7
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 1.5e-07 61.6 157 33.8


User provided reference genes

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