Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G459 Micromonas commoda HOM05D005227 ORTHO05D006379 7.0e-44 180.3 93 100.0
Mapoly0090s0044 Marchantia polymorpha HOM05D005227 ORTHO05D006379 1.6e-19 99.4 87 62.1
AagrBONN_evm.TU.Sc2ySwM_228.4328 Anthoceros agrestis HOM05D005227 ORTHO05D006379 2.1e-19 99.0 89 59.6
Pp3c15_4210 Physcomitrium patens HOM05D005227 ORTHO05D006379 3.6e-16 88.2 85 55.3
RcHm_v2.0_Chr3g0492041 Rosa chinensis HOM05D005227 ORTHO05D006379 9.3e-12 73.6 85 51.8
RcHm_v2.0_Chr5g0021361 Rosa chinensis HOM05D005227 ORTHO05D006379 9.3e-12 73.6 85 51.8
FvH4_3g13100 Fragaria vesca HOM05D005227 ORTHO05D006379 1.6e-11 72.8 85 51.8
FAN11G3694 Fragaria x ananassa HOM05D005227 ORTHO05D006379 1.6e-11 72.8 85 51.8
FAN16G1292 Fragaria x ananassa HOM05D005227 ORTHO05D006379 1.6e-11 72.8 85 51.8
FAN21G2110 Fragaria x ananassa HOM05D005227 ORTHO05D006379 1.6e-11 72.8 85 51.8
Nitab4.5_0000743g0160 Nicotiana tabacum HOM05D005227 ORTHO05D006379 1.7e-10 69.3 85 50.6
Nitab4.5_0001904g0080 Nicotiana tabacum HOM05D005227 ORTHO05D006379 1.7e-10 69.3 83 51.8
Sopen07g029430 Solanum pennellii HOM05D005227 ORTHO05D006379 1.7e-10 69.3 85 50.6
unitig_8.g3748 Utricularia gibba HOM05D005227 ORTHO05D006379 1.7e-10 69.3 84 52.4
Sabra03G0112200 Salix brachista HOM05D005861 ORTHO05D007151 3.0e-10 68.6 85 50.6
Atru.chr8.505 Acer truncatum HOM05D005227 ORTHO05D006379 3.9e-10 68.2 85 50.6
Atru.chr9.939 Acer truncatum HOM05D005227 ORTHO05D006379 3.9e-10 68.2 85 50.6
Peaxi162Scf00254g00421 Petunia axillaris HOM05D005227 ORTHO05D006379 3.9e-10 68.2 85 49.4
Peaxi162Scf00890g00011 Petunia axillaris HOM05D005227 ORTHO05D006379 3.9e-10 68.2 85 49.4
Solyc07g056070.2 Solanum lycopersicum HOM05D005227 ORTHO05D006379 3.9e-10 68.2 85 49.4
Migut.D00502 Erythranthe guttata HOM05D005227 ORTHO05D006379 5.1e-10 67.8 84 51.2
Sed0010668 Sechium edule HOM05D005227 ORTHO05D006379 5.1e-10 67.8 85 50.6
PGSC0003DMG400031097 Solanum tuberosum HOM05D005227 ORTHO05D006379 5.1e-10 67.8 85 49.4
MSTRG.21442 Avicennia marina HOM05D005227 ORTHO05D006379 6.6e-10 67.4 84 50.0
CAN.G585.8 Capsicum annuum HOM05D005227 ORTHO05D006379 8.7e-10 67.0 85 49.4
Sopen07g027180 Solanum pennellii HOM05D005227 ORTHO05D006379 8.7e-10 67.0 85 48.2
CANSAT21G1070 Cannabis sativa HOM05D005227 ORTHO05D006379 1.1e-09 66.6 85 48.2
Sed0019581 Sechium edule HOM05D005227 ORTHO05D006379 1.1e-09 66.6 85 50.6
TWI81G0571 Tripterygium wilfordii HOM05D005227 ORTHO05D006379 1.1e-09 66.6 85 49.4
GSVIVG01012160001 Vitis vinifera HOM05D005227 ORTHO05D006379 1.1e-09 66.6 95 49.5
CSS0013199 Camellia sinensis var. sinensis HOM05D005227 ORTHO05D006379 1.5e-09 66.2 85 49.4
CDE05G2352 Ceratophyllum demersum HOM05D005227 ORTHO05D006379 1.5e-09 66.2 85 49.4
Dinv32750 Davidia involucrata HOM05D005227 ORTHO05D006379 1.5e-09 66.2 85 49.4
HanXRQChr01g0006251 Helianthus annuus HOM05D005227 ORTHO05D006379 1.5e-09 66.2 84 48.8
Potri.003G155000 Populus trichocarpa HOM05D005227 ORTHO05D006379 1.5e-09 66.2 85 50.6
SGA_v2.0_scaffold1G00678 Striga asiatica HOM05D005227 ORTHO05D006379 1.5e-09 66.2 84 50.0
Lalb_Chr17g0339811 Lupinus albus HOM05D005227 ORTHO05D006379 1.9e-09 65.9 93 44.1
PSO541G0222 Papaver somniferum HOM05D005227 ORTHO05D006379 1.9e-09 65.9 85 49.4
PSO675G1867 Papaver somniferum HOM05D005227 ORTHO05D006379 1.9e-09 65.9 85 49.4
TWI15G1171 Tripterygium wilfordii HOM05D005227 ORTHO05D006379 1.9e-09 65.9 85 49.4
Actinidia33652 Actinidia chinensis HOM05D005227 ORTHO05D006379 2.5e-09 65.5 84 47.6
Phvul.010G097600 Phaseolus vulgaris HOM05D005227 ORTHO05D006379 2.5e-09 65.5 93 44.1
PGR004G2312 Punica granatum HOM05D005227 ORTHO05D006379 2.5e-09 65.5 84 47.6
Solyc07g055030.1 Solanum lycopersicum HOM05D005227 ORTHO05D006379 2.5e-09 65.5 85 47.1
PGSC0003DMG401020444 Solanum tuberosum HOM05D005227 ORTHO05D006379 2.5e-09 65.5 85 47.1
Lalb_Chr10g0097141 Lupinus albus HOM05D005227 ORTHO05D006379 3.3e-09 65.1 84 46.4
ClCG03G004140 Citrullus lanatus HOM05D005227 ORTHO05D006379 4.3e-09 64.7 85 49.4
Glyma.03G013100 Glycine max HOM05D005227 ORTHO05D006379 4.3e-09 64.7 93 41.9
arahy.Tifrunner.gnm1.ann1.59GI1K Arachis hypogaea HOM05D005227 ORTHO05D006379 5.6e-09 64.3 86 45.3
arahy.Tifrunner.gnm1.ann1.GL2DWM Arachis hypogaea HOM05D005227 ORTHO05D006379 5.6e-09 64.3 86 45.3
Cpa.g.c40334 Carica papaya HOM05D005227 ORTHO05D006379 5.6e-09 64.3 84 46.4
ECA248G3549 Erigeron canadensis HOM05D005227 ORTHO05D006379 5.6e-09 64.3 85 48.2
HanXRQChr01g0006241 Helianthus annuus HOM05D005227 ORTHO05D006379 5.6e-09 64.3 85 45.9
MD05G1245000 Malus domestica HOM05D005227 ORTHO05D006379 5.6e-09 64.3 85 48.2
Nn7g38372 Nelumbo nucifera HOM05D005227 ORTHO05D006379 5.6e-09 64.3 85 48.2
Oeu041343.1 Olea europaea HOM05D005227 ORTHO05D006379 5.6e-09 64.3 81 51.9
PSO198G0154 Papaver somniferum HOM05D005227 ORTHO05D006379 5.6e-09 64.3 85 48.2
QL07p000144 Quercus lobata HOM05D005227 ORTHO05D006379 5.6e-09 64.3 85 49.4
QL08p045548 Quercus lobata HOM05D005227 ORTHO05D006379 5.6e-09 64.3 85 49.4
Manes.03G071400 Manihot esculenta HOM05D005227 ORTHO05D006379 7.3e-09 63.9 87 48.3
PSO832G3358 Papaver somniferum HOM05D005227 ORTHO05D006379 7.3e-09 63.9 85 48.2
Prupe.1G101300 Prunus persica HOM05D005227 ORTHO05D006379 7.3e-09 63.9 85 49.4
Aqoxy1G01370 Aquilegia oxysepala HOM05D005227 ORTHO05D006379 9.6e-09 63.5 85 49.4
CiPaw.09G138800 Carya illinoinensis HOM05D005227 ORTHO05D006379 9.6e-09 63.5 85 49.4
Cc09_g04960 Coffea canephora HOM05D005227 ORTHO05D006379 9.6e-09 63.5 85 48.2
Duzib084G1247 Durio zibethinus HOM05D005227 ORTHO05D006379 9.6e-09 63.5 85 49.4
Lsat_1_v5_gn_5_150700 Lactuca sativa HOM05D005227 ORTHO05D006379 9.6e-09 63.5 85 47.1
PSO541G1361 Papaver somniferum HOM05D005227 ORTHO05D006379 9.6e-09 63.5 85 48.2
arahy.Tifrunner.gnm1.ann1.BUN8CC Arachis hypogaea HOM05D005227 ORTHO05D006379 1.3e-08 63.2 86 45.3
Cfa001143 Carpinus fangiana HOM05D005227 ORTHO05D006379 1.3e-08 63.2 85 48.2
Ciclev10017275m.g Citrus clementina HOM05D005227 ORTHO05D006379 1.3e-08 63.2 85 47.1
Haze_05241 Corylus avellana HOM05D005227 ORTHO05D006379 1.3e-08 63.2 85 48.2
Thecc.03G046200 Theobroma cacao HOM05D005227 ORTHO05D006379 1.3e-08 63.2 85 48.2
MELO3C002397.2 Cucumis melo HOM05D005227 ORTHO05D006379 1.6e-08 62.8 85 49.4
CsaV3_1G010070 Cucumis sativus L. HOM05D005227 ORTHO05D006379 1.6e-08 62.8 85 49.4
Duzib205G0364 Durio zibethinus HOM05D005227 ORTHO05D006379 1.6e-08 62.8 85 48.2
Eucgr.D00008 Eucalyptus grandis HOM05D005227 ORTHO05D006379 1.6e-08 62.8 85 49.4
PGR142G0063 Punica granatum HOM05D005227 ORTHO05D006379 1.6e-08 62.8 85 48.2
Sc15g0005680 Simmondsia chinensis HOM05D005227 ORTHO05D006379 1.6e-08 62.8 85 47.1
Dinv26307 Davidia involucrata HOM05D005227 ORTHO05D006379 2.1e-08 62.4 85 48.2
TPR.G1285 Trifolium pratense HOM05D005227 ORTHO05D006379 2.1e-08 62.4 94 43.6
COL.COLO4_36891 Corchorus olitorius HOM05D005227 ORTHO05D006379 2.8e-08 62.0 85 48.2
TPR.G4382 Trifolium pratense HOM05D005227 ORTHO05D006379 2.8e-08 62.0 92 43.5
TAR627G1207 Trochodendron aralioides HOM05D005227 ORTHO05D006379 2.8e-08 62.0 94 42.6
Glyma.07G072800 Glycine max HOM05D005227 ORTHO05D006379 3.6e-08 61.6 84 44.0
HPP92_006340 Vanilla planifolia HOM05D005227 ORTHO05D006379 3.6e-08 61.6 86 46.5
Gohir.A11G165700 Gossypium hirsutum HOM05D005227 ORTHO05D006379 4.8e-08 61.2 84 46.4
Gohir.D11G171900 Gossypium hirsutum HOM05D005227 ORTHO05D006379 4.8e-08 61.2 84 46.4
Gorai.007G184300 Gossypium raimondii HOM05D005227 ORTHO05D006379 4.8e-08 61.2 84 46.4
MD10G1226300 Malus domestica HOM05D005227 ORTHO05D006379 4.8e-08 61.2 85 48.2
ATR0752G166 Amborella trichopoda HOM05D005227 ORTHO05D006379 6.2e-08 60.8 85 45.9
EL10Ac4g09705 Beta vulgaris HOM05D005227 ORTHO05D006379 6.2e-08 60.8 85 45.9
AUR62042297 Chenopodium quinoa HOM05D005227 ORTHO05D006379 6.2e-08 60.8 85 44.7
Lj3g0019179 Lotus japonicus HOM05D005227 ORTHO05D006379 6.2e-08 60.8 93 43.0
SalBow2G2250 Salvia bowleyana HOM05D005227 ORTHO05D006379 6.2e-08 60.8 84 47.6
THA.LOC104806226 Tarenaya hassleriana HOM05D005227 ORTHO05D006379 1.1e-07 60.1 93 41.9
Os05g0148300 Oryza sativa ssp. japonica HOM05D005227 ORTHO05D006379 3.1e-07 58.5 84 42.9
Rhsim13G0134700 Rhododendron simsii HOM05D005227 ORTHO05D006379 3.1e-07 58.5 84 47.6
RhsimUnG0177600 Rhododendron simsii HOM05D005227 ORTHO05D006379 3.1e-07 58.5 84 47.6
Glyma.03G084100 Glycine max HOM05D005227 ORTHO05D006379 4.0e-07 58.2 86 43.0
Medtr8g031320 Medicago truncatula HOM05D005227 ORTHO05D006379 4.0e-07 58.2 83 42.2
Aa31LG9G8450 Aethionema arabicum HOM05D003109 ORTHO05D003578 9.0e-07 57.0 85 43.5
AL8G14830 Arabidopsis lyrata HOM05D005227 ORTHO05D006379 9.0e-07 57.0 84 45.2
BcaC06g31592 Brassica carinata HOM05D005227 ORTHO05D006379 9.0e-07 57.0 84 45.2
BcaC06g31593 Brassica carinata HOM05D005227 ORTHO05D006379 9.0e-07 57.0 84 45.2
AT5G44710 Arabidopsis thaliana HOM05D005227 ORTHO05D006379 1.5e-06 56.2 84 45.2
Ciclev10010372m.g Citrus clementina HOM05D005227 ORTHO05D006379 1.5e-06 56.2 85 43.5
Thhalv10001080m.g Eutrema salsugineum HOM05D005227 ORTHO05D006379 1.5e-06 56.2 85 45.9
Zm00001eb354280 Zea mays HOM05D005227 ORTHO05D006379 1.5e-06 56.2 83 41.0
CARHR178190 Cardamine hirsuta HOM05D005227 ORTHO05D006379 2.0e-06 55.8 84 44.0
Cfa001148 Carpinus fangiana HOM05D005227 ORTHO05D006379 2.0e-06 55.8 85 43.5
Carub.0001s3436 Capsella rubella HOM05D005227 ORTHO05D006379 2.6e-06 55.5 84 44.0
Carub.0008s0355 Capsella rubella HOM05D005227 ORTHO05D006379 2.6e-06 55.5 84 44.0
BcaB07g30501 Brassica carinata HOM05D005227 ORTHO05D006379 3.4e-06 55.1 84 44.0
A02p28550 Brassica napus HOM05D005227 ORTHO05D006379 3.4e-06 55.1 84 44.0
BolC2t10561H Brassica oleracea HOM05D005227 ORTHO05D006379 3.4e-06 55.1 84 44.0
BraA02t07892Z Brassica rapa HOM05D005227 ORTHO05D006379 3.4e-06 55.1 84 44.0
BcaC03g16691 Brassica carinata HOM05D005227 ORTHO05D006379 4.4e-06 54.7 84 44.0
Sp2g09520 Schrenkiella parvula HOM05D005227 ORTHO05D006379 9.9e-06 53.5 84 44.0


User provided reference genes

Program Settings