Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 1.2e-251 872.8 489 100.0
MCO15G091 Micromonas commoda HOM05D036318 ORTHO05D005510 2.4e-18 97.8 268 32.5
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 1.9e-15 88.2 276 27.9
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 6.8e-13 79.7 274 28.5
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.4e-10 72.0 261 27.6
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.4e-10 72.0 262 27.1
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 3.2e-10 70.9 275 26.2
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 1.2e-09 68.9 260 25.8
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.6e-09 68.6 280 26.1
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.6e-09 68.6 280 26.1
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 2.0e-09 68.2 248 23.8
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 2.7e-09 67.8 279 28.0
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 3.5e-09 67.4 281 24.9
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 4.6e-09 67.0 260 26.2
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 7.8e-09 66.2 277 24.9
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 1.3e-08 65.5 264 26.1
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 1.7e-08 65.1 285 26.0
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 2.3e-08 64.7 260 26.2
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 2.3e-08 64.7 259 23.9
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.3e-08 64.7 259 23.9
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 2.3e-08 64.7 260 27.7
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 2.3e-08 64.7 282 24.5
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 5.0e-08 63.5 260 25.4
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 5.0e-08 63.5 260 25.8
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 5.0e-08 63.5 260 27.3
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 6.6e-08 63.2 259 26.6
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 6.6e-08 63.2 265 24.5
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 6.6e-08 63.2 265 26.4
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 6.6e-08 63.2 260 26.9
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.1e-07 62.4 272 24.3
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 1.1e-07 62.4 260 25.0
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 1.1e-07 62.4 282 25.2
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 1.1e-07 62.4 260 25.0
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 1.1e-07 62.4 273 24.9
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 1.1e-07 62.4 273 24.9
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 1.5e-07 62.0 260 26.5
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.5e-07 62.0 259 25.9
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 1.5e-07 62.0 260 25.0
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 1.5e-07 62.0 251 22.7
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 1.9e-07 61.6 274 24.5
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 2.5e-07 61.2 246 26.4
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 2.5e-07 61.2 281 24.2
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 2.5e-07 61.2 260 25.0
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.5e-07 61.2 260 24.6
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 2.5e-07 61.2 265 26.0
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 4.3e-07 60.5 269 25.7
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 4.3e-07 60.5 243 25.9
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.6e-07 60.1 255 24.7
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 5.6e-07 60.1 262 24.8
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 5.6e-07 60.1 258 24.4
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 7.3e-07 59.7 263 24.0
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 7.3e-07 59.7 259 22.4
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 7.3e-07 59.7 289 26.0
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 7.3e-07 59.7 259 24.3
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 7.3e-07 59.7 278 22.7
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 9.5e-07 59.3 258 25.6
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 9.5e-07 59.3 286 25.2
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 9.5e-07 59.3 254 25.6
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 9.5e-07 59.3 259 23.6
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.2e-06 58.9 260 24.6
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.6e-06 58.5 259 24.3
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 1.6e-06 58.5 264 22.7
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 2.8e-06 57.8 274 24.5
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 3.6e-06 57.4 260 24.6
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 3.6e-06 57.4 263 25.1
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 4.7e-06 57.0 260 23.1
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 4.7e-06 57.0 263 24.7
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 6.2e-06 56.6 260 23.5
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 6.2e-06 56.6 279 23.7
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 8.0e-06 56.2 263 23.6


User provided reference genes

Program Settings