Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 1.5e-74 282.7 135 100.0
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 5.8e-39 164.5 126 62.7
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 9.9e-39 163.7 119 62.2
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 1.3e-38 163.3 116 65.5
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 2.2e-38 162.5 123 61.0
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 8.4e-38 160.6 127 60.6
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 1.4e-37 159.8 131 58.8
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 1.4e-37 159.8 123 58.5
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 2.4e-37 159.1 116 62.9
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 2.4e-37 159.1 123 61.8
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 9.2e-37 157.1 124 61.3
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 1.6e-36 156.4 127 56.7
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 2.1e-36 156.0 125 56.8
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 2.1e-36 156.0 130 56.9
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 2.7e-36 155.6 134 55.2
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 4.6e-36 154.8 127 61.4
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 4.6e-36 154.8 128 56.2
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 1.0e-35 153.7 123 60.2
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 1.0e-35 153.7 117 61.5
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 1.3e-35 153.3 123 60.2
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 1.3e-35 153.3 128 55.5
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 1.7e-35 152.9 125 56.8
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 1.7e-35 152.9 116 60.3
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.7e-35 152.9 133 54.9
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 2.3e-35 152.5 121 57.9
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 2.3e-35 152.5 128 55.5
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 2.3e-35 152.5 116 62.1
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 3.0e-35 152.1 116 59.5
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 3.0e-35 152.1 133 54.9
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 3.0e-35 152.1 125 56.8
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 3.0e-35 152.1 116 61.2
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 3.9e-35 151.8 125 56.0
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 3.9e-35 151.8 125 56.0
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 3.9e-35 151.8 116 60.3
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 5.1e-35 151.4 127 59.1
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 5.1e-35 151.4 125 55.2
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 5.1e-35 151.4 133 54.1
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 5.1e-35 151.4 133 54.1
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 5.1e-35 151.4 116 61.2
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 5.1e-35 151.4 116 61.2
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 6.6e-35 151.0 114 61.4
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 6.6e-35 151.0 123 57.7
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 6.6e-35 151.0 129 54.3
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 6.6e-35 151.0 121 57.0
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 6.6e-35 151.0 121 57.0
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 8.6e-35 150.6 128 55.5
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 1.1e-34 150.2 121 56.2
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 1.1e-34 150.2 120 57.5
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 1.5e-34 149.8 127 58.3
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 1.5e-34 149.8 116 58.6
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 1.5e-34 149.8 128 56.2
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.9e-34 149.4 116 58.6
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.9e-34 149.4 114 58.8
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 1.9e-34 149.4 129 55.8
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 1.9e-34 149.4 129 55.0
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 2.5e-34 149.1 123 57.7
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 2.5e-34 149.1 120 58.3
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 2.5e-34 149.1 120 58.3
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 2.5e-34 149.1 116 59.5
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 3.3e-34 148.7 116 59.5
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 3.3e-34 148.7 120 58.3
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 3.3e-34 148.7 129 56.6
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 4.3e-34 148.3 126 54.8
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 4.3e-34 148.3 119 57.1
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 4.3e-34 148.3 128 56.2
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 4.3e-34 148.3 120 57.5
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 4.3e-34 148.3 116 58.6
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 4.3e-34 148.3 120 56.7
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 4.3e-34 148.3 116 61.2
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 5.6e-34 147.9 128 54.7
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 7.3e-34 147.5 125 53.6
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 7.3e-34 147.5 125 53.6
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 7.3e-34 147.5 127 56.7
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 7.3e-34 147.5 116 56.9
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 1.2e-33 146.7 129 55.0
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.2e-33 146.7 116 58.6
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.2e-33 146.7 116 58.6
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 1.6e-33 146.4 116 58.6
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 2.1e-33 146.0 115 58.3
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 2.1e-33 146.0 128 56.2
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 2.1e-33 146.0 133 54.1
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 2.8e-33 145.6 129 55.0
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 3.6e-33 145.2 119 56.3
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 3.6e-33 145.2 127 53.5
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 3.6e-33 145.2 116 59.5
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 3.6e-33 145.2 118 57.6
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 4.7e-33 144.8 116 56.0
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 4.7e-33 144.8 131 55.7
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 6.2e-33 144.4 120 55.8
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 6.2e-33 144.4 116 59.5
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 8.1e-33 144.1 116 59.5
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 1.1e-32 143.7 127 52.8
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 1.1e-32 143.7 116 59.5
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.1e-32 143.7 128 56.2
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 1.4e-32 143.3 116 56.9
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.4e-32 143.3 128 56.2
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 2.4e-32 142.5 116 57.8
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 3.1e-32 142.1 117 58.1
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 1.5e-31 139.8 116 57.8
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 1.5e-31 139.8 124 54.0
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 9.9e-31 137.1 136 50.7
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 8.4e-30 134.0 116 55.2
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 1.1e-29 133.7 99 60.6
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 3.0e-27 125.6 148 43.9
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 3.1e-24 115.5 138 43.5
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 9.0e-24 114.0 147 40.8
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 3.4e-23 112.1 127 48.8
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 7.9e-20 100.9 133 45.9
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 3.1e-16 89.0 120 37.5
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 2.0e-15 86.3 60 65.0
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.0e-11 73.9 74 47.3
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 3.0e-11 72.4 74 45.9
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 7.4e-10 67.8 56 53.6
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 1.3e-09 67.0 56 50.0


User provided reference genes

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