Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 9.1e-178 626.7 297 100.0
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 3.8e-51 206.1 305 38.4
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 3.8e-51 206.1 312 39.4
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 5.0e-51 205.7 307 39.4
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 4.2e-50 202.6 315 39.7
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 9.4e-50 201.4 313 39.3
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 1.2e-49 201.1 316 39.2
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 3.6e-49 199.5 312 39.1
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 6.1e-49 198.7 314 39.2
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 1.0e-48 198.0 313 39.0
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 1.0e-48 198.0 313 37.7
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 1.0e-48 198.0 309 39.2
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 1.0e-48 198.0 307 39.7
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.0e-48 198.0 313 40.9
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.8e-48 197.2 312 38.5
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 1.8e-48 197.2 312 38.5
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 2.3e-48 196.8 313 38.3
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 2.3e-48 196.8 314 38.5
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 3.0e-48 196.4 308 38.3
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 3.9e-48 196.1 314 38.9
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 3.9e-48 196.1 311 39.2
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 5.2e-48 195.7 313 37.4
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 5.2e-48 195.7 312 38.5
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 6.7e-48 195.3 313 37.4
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 6.7e-48 195.3 314 38.2
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 6.7e-48 195.3 309 37.5
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 8.8e-48 194.9 315 38.7
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 8.8e-48 194.9 312 37.8
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.1e-47 194.5 315 39.0
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.1e-47 194.5 306 39.2
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 1.5e-47 194.1 314 37.9
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 1.5e-47 194.1 313 38.7
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 1.5e-47 194.1 315 37.8
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 2.0e-47 193.7 314 37.6
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 2.6e-47 193.4 315 38.7
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 2.6e-47 193.4 308 38.3
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 2.6e-47 193.4 312 36.9
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 5.7e-47 192.2 315 36.5
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 5.7e-47 192.2 312 36.9
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 5.7e-47 192.2 314 37.6
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 7.4e-47 191.8 303 39.3
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 7.4e-47 191.8 309 37.2
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 7.4e-47 191.8 311 37.9
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 9.7e-47 191.4 311 37.3
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.3e-46 191.0 314 38.9
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.7e-46 190.7 312 36.9
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 2.2e-46 190.3 314 37.6
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 2.2e-46 190.3 312 36.5
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 2.8e-46 189.9 313 38.7
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 2.8e-46 189.9 309 37.2
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 2.8e-46 189.9 312 38.1
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 3.7e-46 189.5 307 37.1
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 3.7e-46 189.5 309 36.6
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 4.8e-46 189.1 312 36.5
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 4.8e-46 189.1 313 38.0
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 6.3e-46 188.7 308 37.7
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 6.3e-46 188.7 307 37.1
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 8.2e-46 188.3 314 36.6
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.1e-45 188.0 304 38.5
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 1.1e-45 188.0 312 36.5
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 1.1e-45 188.0 309 36.2
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.4e-45 187.6 304 38.5
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 1.8e-45 187.2 313 37.7
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 2.4e-45 186.8 315 35.6
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 3.1e-45 186.4 307 37.8
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 4.1e-45 186.0 312 36.9
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 7.0e-45 185.3 306 36.6
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 7.0e-45 185.3 300 38.0
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.2e-44 184.5 307 36.5
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.2e-44 184.5 307 37.1
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 1.6e-44 184.1 306 35.9
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 2.0e-44 183.7 330 36.1
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 2.0e-44 183.7 330 36.1
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 2.6e-44 183.3 313 35.5
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.6e-44 183.3 309 36.6
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 3.5e-44 183.0 327 36.1
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 4.5e-44 182.6 312 36.5
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 7.7e-44 181.8 309 36.2
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 1.0e-43 181.4 307 37.5
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 1.7e-43 180.6 321 36.4
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 2.2e-43 180.3 308 36.7
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 5.0e-43 179.1 307 36.8
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 6.5e-43 178.7 309 35.9
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.1e-42 177.9 309 36.2
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.9e-42 177.2 310 35.5
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 2.5e-42 176.8 306 35.0
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 5.5e-42 175.6 310 35.2
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 1.2e-41 174.5 295 37.3
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 1.2e-41 174.5 314 34.1
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 1.6e-41 174.1 262 40.5
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 1.6e-41 174.1 290 36.2
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.4e-40 171.0 291 35.4
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 1.4e-40 171.0 277 36.1
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.8e-40 170.6 313 36.1
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 4.0e-40 169.5 294 36.1
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 6.8e-40 168.7 260 37.7
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 1.5e-39 167.5 260 38.8
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 3.4e-39 166.4 260 38.8
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.1e-37 161.4 296 36.5
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 9.1e-37 158.3 314 32.2
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 5.9e-36 155.6 303 33.3
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 6.5e-35 152.1 199 42.7
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 1.5e-34 151.0 250 35.6
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 2.3e-32 143.7 311 32.8
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 5.7e-31 139.0 303 30.7
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 3.7e-30 136.3 260 33.8
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 5.4e-29 132.5 250 33.2
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 4.5e-28 129.4 220 38.2
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 1.7e-27 127.5 204 40.2
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 2.2e-22 110.5 149 38.9
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 3.4e-15 86.7 120 36.7
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 1.5e-10 71.2 148 33.8
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 5.2e-08 62.8 96 41.7
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 6.8e-08 62.4 84 34.5
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 2.0e-07 60.8 135 32.6
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 2.6e-07 60.5 98 33.7
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 3.7e-06 56.6 71 36.6


User provided reference genes

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