Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 1.4e-198 696.0 350 100.0
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.5e-09 68.2 289 26.3
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 1.5e-09 68.2 247 27.9
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 4.3e-09 66.6 290 26.6
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 7.3e-09 65.9 286 27.3
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 7.3e-09 65.9 290 26.6
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 7.3e-09 65.9 290 26.6
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 9.5e-09 65.5 266 28.2
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 1.6e-08 64.7 266 27.8
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 1.6e-08 64.7 286 26.9
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.6e-08 64.7 247 28.3
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 1.6e-08 64.7 247 27.9
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 1.6e-08 64.7 286 27.3
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 2.1e-08 64.3 266 27.1
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 2.1e-08 64.3 313 25.2
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 2.8e-08 63.9 254 27.2
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.8e-08 63.9 247 27.9
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 3.6e-08 63.5 266 27.8
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 3.6e-08 63.5 266 25.6
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 3.6e-08 63.5 305 25.6
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 4.7e-08 63.2 247 28.3
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 6.1e-08 62.8 264 26.9
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 8.0e-08 62.4 286 26.9
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 8.0e-08 62.4 293 26.3
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 8.0e-08 62.4 233 27.9
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 1.0e-07 62.0 309 25.6
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 1.0e-07 62.0 247 27.5
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.4e-07 61.6 269 25.7
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 1.4e-07 61.6 194 30.4
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 1.8e-07 61.2 247 27.5
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 1.8e-07 61.2 279 26.5
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.8e-07 61.2 247 27.9
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.8e-07 61.2 247 27.1
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 1.8e-07 61.2 246 28.0
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.8e-07 61.2 305 26.6
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 1.8e-07 61.2 247 27.5
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 2.3e-07 60.8 247 27.9
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 2.3e-07 60.8 249 27.7
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 2.3e-07 60.8 311 26.4
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 3.1e-07 60.5 266 27.4
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 4.0e-07 60.1 202 29.7
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 4.0e-07 60.1 193 28.5
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 4.0e-07 60.1 320 26.2
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 5.2e-07 59.7 202 29.7
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 5.2e-07 59.7 266 27.1
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 6.8e-07 59.3 202 29.7
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 6.8e-07 59.3 292 26.0
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 6.8e-07 59.3 233 28.3
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 8.9e-07 58.9 287 26.8
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 8.9e-07 58.9 266 25.9
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 8.9e-07 58.9 275 25.8
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.2e-06 58.5 309 25.2
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 1.2e-06 58.5 309 25.2
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 1.5e-06 58.2 248 27.8
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.5e-06 58.2 266 26.7
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 1.5e-06 58.2 312 25.6
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 2.0e-06 57.8 288 24.3
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 2.6e-06 57.4 202 29.2
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 2.6e-06 57.4 202 29.2
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 2.6e-06 57.4 202 29.2
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 2.6e-06 57.4 202 29.2
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 2.6e-06 57.4 304 24.7
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 2.6e-06 57.4 304 24.7
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 2.6e-06 57.4 247 27.1
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 3.4e-06 57.0 289 23.9
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 3.4e-06 57.0 202 29.2
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 3.4e-06 57.0 194 29.4
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 4.4e-06 56.6 249 26.1
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 5.8e-06 56.2 215 29.3
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 5.8e-06 56.2 275 25.5
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 7.5e-06 55.8 233 27.5
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 9.8e-06 55.5 202 29.2
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 9.8e-06 55.5 202 29.2
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 9.8e-06 55.5 202 29.2
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 9.8e-06 55.5 202 29.2
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 9.8e-06 55.5 202 29.2


User provided reference genes

Program Settings