Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 2.0e-68 262.3 135 100.0
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 7.4e-10 67.8 118 36.4
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 1.3e-09 67.0 118 37.3
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 2.8e-09 65.9 110 32.7
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 8.2e-09 64.3 115 33.9
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 1.4e-08 63.5 106 35.8
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 1.4e-08 63.5 97 36.1
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 3.1e-08 62.4 103 35.0
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 4.0e-08 62.0 113 32.7
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 4.0e-08 62.0 109 34.9
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 5.3e-08 61.6 113 32.7
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 5.3e-08 61.6 113 32.7
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 6.9e-08 61.2 113 36.3
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 6.9e-08 61.2 106 34.9
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 6.9e-08 61.2 106 34.0
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 6.9e-08 61.2 88 35.2
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 9.0e-08 60.8 118 34.7
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 9.0e-08 60.8 115 31.3
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 1.2e-07 60.5 103 34.0
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 1.5e-07 60.1 109 35.8
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 1.5e-07 60.1 103 33.0
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 1.5e-07 60.1 109 34.9
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 1.5e-07 60.1 109 34.9
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 1.5e-07 60.1 103 32.0
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.6e-07 59.3 106 35.8
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 2.6e-07 59.3 103 32.0
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 2.6e-07 59.3 103 32.0
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 2.6e-07 59.3 109 35.8
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 2.6e-07 59.3 103 33.0
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.6e-07 59.3 103 33.0
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.6e-07 59.3 103 33.0
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.6e-07 59.3 103 33.0
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 4.5e-07 58.5 103 34.0
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 5.8e-07 58.2 103 32.0
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 5.8e-07 58.2 106 34.9
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 5.8e-07 58.2 117 33.3
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 5.8e-07 58.2 109 33.0
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 7.6e-07 57.8 93 35.5
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 7.6e-07 57.8 98 34.7
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 7.6e-07 57.8 107 31.8
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 7.6e-07 57.8 118 30.5
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 7.6e-07 57.8 106 33.0
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 1.0e-06 57.4 103 30.1
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 1.0e-06 57.4 108 34.3
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 1.3e-06 57.0 93 35.5
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 1.3e-06 57.0 106 34.0
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 1.3e-06 57.0 90 35.6
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 1.3e-06 57.0 106 35.8
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 1.7e-06 56.6 93 34.4
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 1.7e-06 56.6 90 35.6
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 1.7e-06 56.6 110 33.6
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 2.2e-06 56.2 90 32.2
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 2.9e-06 55.8 111 33.3
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 3.8e-06 55.5 116 33.6
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 3.8e-06 55.5 97 36.1
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 3.8e-06 55.5 111 34.2
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 3.8e-06 55.5 106 34.9
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 3.8e-06 55.5 106 34.9
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 3.8e-06 55.5 106 34.0
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 4.9e-06 55.1 106 34.0
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 4.9e-06 55.1 106 34.0
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 4.9e-06 55.1 110 32.7
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 4.9e-06 55.1 109 33.9
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 4.9e-06 55.1 106 32.1
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 6.5e-06 54.7 106 32.1
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 6.5e-06 54.7 103 32.0
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 6.5e-06 54.7 104 34.6
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 8.4e-06 54.3 90 35.6
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 8.4e-06 54.3 103 31.1
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 8.4e-06 54.3 104 30.8
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 8.4e-06 54.3 102 31.4


User provided reference genes

Program Settings