Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G250 Micromonas commoda HOM05D005053 ORTHO05D006206 1.5e-115 419.5 207 100.0
Mapoly0011s0084 Marchantia polymorpha HOM05D005053 ORTHO05D006206 6.3e-45 184.9 216 42.6
SMO271G0126 Selaginella moellendorffii HOM05D005053 ORTHO05D006206 1.8e-44 183.3 220 42.3
ATR0225G009 Amborella trichopoda HOM05D005053 ORTHO05D006206 1.3e-42 177.2 221 41.6
Pp3c11_5110 Physcomitrium patens HOM05D005053 ORTHO05D006206 5.6e-41 171.8 223 41.7
PSO541G4895 Papaver somniferum HOM05D005053 ORTHO05D006206 1.2e-40 170.6 220 39.5
PSO675G4006 Papaver somniferum HOM05D005053 ORTHO05D006206 1.2e-40 170.6 220 39.5
SEGI_13826 Sequoiadendron giganteum HOM05D005053 ORTHO05D006206 4.7e-40 168.7 220 39.1
AagrBONN_evm.TU.Sc2ySwM_344.1822 Anthoceros agrestis HOM05D005053 ORTHO05D006206 8.0e-40 167.9 216 39.8
Ca_22210_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 1.0e-39 167.5 224 39.7
Glyma.17G180900 Glycine max HOM05D005053 ORTHO05D006206 1.0e-39 167.5 221 38.9
Phvul.003G248000 Phaseolus vulgaris HOM05D005053 ORTHO05D006206 1.0e-39 167.5 224 39.7
VMungo0251G0766 Vigna mungo HOM05D005053 ORTHO05D006206 1.8e-39 166.8 223 39.5
Hund13583 Selenicereus undatus HOM05D005053 ORTHO05D006206 2.3e-39 166.4 223 39.0
Aqoxy6G00906 Aquilegia oxysepala HOM05D005053 ORTHO05D006206 3.0e-39 166.0 221 39.4
arahy.Tifrunner.gnm1.ann1.IMYE37 Arachis hypogaea HOM05D005053 ORTHO05D006206 3.0e-39 166.0 221 38.5
arahy.Tifrunner.gnm1.ann1.VE46QQ Arachis hypogaea HOM05D005053 ORTHO05D006206 3.0e-39 166.0 221 38.5
Lj4g0026236 Lotus japonicus HOM05D005053 ORTHO05D006206 3.0e-39 166.0 221 38.0
Medtr8g079240 Medicago truncatula HOM05D005053 ORTHO05D006206 3.0e-39 166.0 221 38.9
EL10Ac6g15144 Beta vulgaris HOM05D005053 ORTHO05D006206 8.9e-39 164.5 219 37.4
AUR62001971 Chenopodium quinoa HOM05D005053 ORTHO05D006206 1.5e-38 163.7 219 36.5
Lalb_Chr09g0333681 Lupinus albus HOM05D005053 ORTHO05D006206 1.5e-38 163.7 221 38.9
RcHm_v2.0_Chr2g0104011 Rosa chinensis HOM05D005053 ORTHO05D006206 1.5e-38 163.7 222 38.3
Eucgr.H01988 Eucalyptus grandis HOM05D005053 ORTHO05D006206 2.6e-38 162.9 221 37.1
vmacro17912 Vaccinium macrocarpon HOM05D005053 ORTHO05D006206 3.4e-38 162.5 221 38.5
Atru.chr3.440 Acer truncatum HOM05D005053 ORTHO05D006206 4.4e-38 162.2 221 38.5
Gorai.008G072800 Gossypium raimondii HOM05D005053 ORTHO05D006206 4.4e-38 162.2 221 36.7
CBR_g23008 Chara braunii HOM05D005053 ORTHO05D006206 5.8e-38 161.8 219 39.7
TAR376G0500 Trochodendron aralioides HOM05D005053 ORTHO05D006206 7.5e-38 161.4 221 38.9
GSVIVG01005060001 Vitis vinifera HOM05D005053 ORTHO05D006206 7.5e-38 161.4 221 38.5
ClCG01G016600 Citrullus lanatus HOM05D005053 ORTHO05D006206 1.3e-37 160.6 223 37.7
Thecc.01G049700 Theobroma cacao HOM05D005053 ORTHO05D006206 1.3e-37 160.6 222 36.9
CsaV3_6G042980 Cucumis sativus L. HOM05D005053 ORTHO05D006206 1.7e-37 160.2 223 37.7
MD15G1276200 Malus domestica HOM05D005053 ORTHO05D006206 1.7e-37 160.2 221 38.0
MELO3C007534.2 Cucumis melo HOM05D005053 ORTHO05D006206 2.2e-37 159.8 223 37.7
Migut.H00475 Erythranthe guttata HOM05D005053 ORTHO05D006206 2.2e-37 159.8 218 38.1
Hma1.2p1_0687F.1_g203520 Hydrangea macrophylla HOM05D005053 ORTHO05D006206 2.9e-37 159.5 220 39.1
Ca_22228_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 3.7e-37 159.1 200 41.5
FvH4_1g14960 Fragaria vesca HOM05D005053 ORTHO05D006206 3.7e-37 159.1 222 36.9
FAN23G1215 Fragaria x ananassa HOM05D005053 ORTHO05D006206 4.9e-37 158.7 222 36.9
FAN26G1713 Fragaria x ananassa HOM05D005053 ORTHO05D006206 4.9e-37 158.7 222 36.9
Manes.13G129200 Manihot esculenta HOM05D005053 ORTHO05D006206 4.9e-37 158.7 221 38.9
AUR62003832 Chenopodium quinoa HOM05D005053 ORTHO05D006206 8.3e-37 157.9 195 39.0
MD02G1163200 Malus domestica HOM05D005053 ORTHO05D006206 8.3e-37 157.9 222 36.5
AagrBONN_evm.TU.Sc2ySwM_344.1821 Anthoceros agrestis HOM05D005053 ORTHO05D006206 1.1e-36 157.5 188 39.9
COL.COLO4_11341 Corchorus olitorius HOM05D005053 ORTHO05D006206 1.1e-36 157.5 221 38.0
Carub.0008s2757 Capsella rubella HOM05D005053 ORTHO05D006206 1.9e-36 156.8 220 35.5
Nitab4.5_0000806g0140 Nicotiana tabacum HOM05D005053 ORTHO05D006206 1.9e-36 156.8 220 38.2
Sp2g29730 Schrenkiella parvula HOM05D005053 ORTHO05D006206 1.9e-36 156.8 220 35.5
TAR628G0491 Trochodendron aralioides HOM05D005053 ORTHO05D006206 1.9e-36 156.8 199 40.7
Cfa003962 Carpinus fangiana HOM05D005053 ORTHO05D006206 2.4e-36 156.4 222 35.6
FAN19G0163 Fragaria x ananassa HOM05D005053 ORTHO05D006206 2.4e-36 156.4 222 36.5
AL8G44450 Arabidopsis lyrata HOM05D005053 ORTHO05D006206 3.2e-36 156.0 220 35.0
Cpa.g.sc6.408 Carica papaya HOM05D005053 ORTHO05D006206 3.2e-36 156.0 221 36.2
CARHR280750 Cardamine hirsuta HOM05D005053 ORTHO05D006206 4.1e-36 155.6 220 33.2
FAN28G1734 Fragaria x ananassa HOM05D005053 ORTHO05D006206 4.1e-36 155.6 223 37.2
Sc03g0001310 Simmondsia chinensis HOM05D005053 ORTHO05D006206 5.4e-36 155.2 223 36.3
CAN.G470.7 Capsicum annuum HOM05D005053 ORTHO05D006206 7.0e-36 154.8 220 38.2
Sed0021889 Sechium edule HOM05D005053 ORTHO05D006206 7.0e-36 154.8 225 36.9
HPP92_024294 Vanilla planifolia HOM05D005053 ORTHO05D006206 7.0e-36 154.8 221 37.1
HPP92_024303 Vanilla planifolia HOM05D005053 ORTHO05D006206 7.0e-36 154.8 221 37.1
Cc07_g05640 Coffea canephora HOM05D005053 ORTHO05D006206 9.2e-36 154.5 221 38.9
Potri.007G037800 Populus trichocarpa HOM05D005053 ORTHO05D006206 9.2e-36 154.5 221 37.1
PGR102G2816 Punica granatum HOM05D005053 ORTHO05D006206 1.2e-35 154.1 221 34.4
THA.LOC104819229 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 1.2e-35 154.1 220 33.6
THA.LOC104821262 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 1.2e-35 154.1 221 36.2
unitig_736.g22369 Utricularia gibba HOM05D005053 ORTHO05D006206 1.6e-35 153.7 220 37.7
AT5G66930 Arabidopsis thaliana HOM05D005053 ORTHO05D006206 2.0e-35 153.3 220 35.0
BolC9t54027H Brassica oleracea HOM05D005053 ORTHO05D006206 2.0e-35 153.3 223 35.0
Nn6g32115 Nelumbo nucifera HOM05D005053 ORTHO05D006206 2.0e-35 153.3 224 36.2
A09p09640 Brassica napus HOM05D005053 ORTHO05D006206 2.7e-35 152.9 221 35.3
BraA09t36613Z Brassica rapa HOM05D005053 ORTHO05D006206 2.7e-35 152.9 221 35.3
CSS0024932 Camellia sinensis var. sinensis HOM05D005053 ORTHO05D006206 2.7e-35 152.9 221 36.7
Actinidia36514 Actinidia chinensis HOM05D005053 ORTHO05D006206 3.5e-35 152.5 221 37.1
Aa31LG1G15480 Aethionema arabicum HOM05D005053 ORTHO05D006206 3.5e-35 152.5 221 34.8
Actinidia12070 Actinidia chinensis HOM05D005053 ORTHO05D006206 4.6e-35 152.1 221 36.7
BcaC04g23174 Brassica carinata HOM05D005053 ORTHO05D006206 6.0e-35 151.8 222 35.1
C09p11390 Brassica napus HOM05D005053 ORTHO05D006206 6.0e-35 151.8 222 35.1
Gohir.A12G069100 Gossypium hirsutum HOM05D005053 ORTHO05D006206 6.0e-35 151.8 197 38.6
Gohir.D12G090200 Gossypium hirsutum HOM05D005053 ORTHO05D006206 6.0e-35 151.8 197 39.1
QL06p043337 Quercus lobata HOM05D005053 ORTHO05D006206 6.0e-35 151.8 195 39.5
Solyc02g065180.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 6.0e-35 151.8 220 38.2
Sopen02g015310 Solanum pennellii HOM05D005053 ORTHO05D006206 6.0e-35 151.8 220 38.2
Lsat_1_v5_gn_2_86920 Lactuca sativa HOM05D005053 ORTHO05D006206 7.8e-35 151.4 221 35.7
BcaB04g20086 Brassica carinata HOM05D005053 ORTHO05D006206 1.0e-34 151.0 221 34.4
HanXRQChr14g0448331 Helianthus annuus HOM05D005053 ORTHO05D006206 1.7e-34 150.2 221 35.7
Haze_15460 Corylus avellana HOM05D005053 ORTHO05D006206 3.0e-34 149.4 198 36.4
BcaC06g34767 Brassica carinata HOM05D005053 ORTHO05D006206 3.9e-34 149.1 218 34.4
C07p24820 Brassica napus HOM05D005053 ORTHO05D006206 3.9e-34 149.1 218 34.4
TWI09G0689 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 6.6e-34 148.3 205 38.0
Oeu004887.1 Olea europaea HOM05D005053 ORTHO05D006206 8.6e-34 147.9 218 37.6
Duzib147G0596 Durio zibethinus HOM05D005053 ORTHO05D006206 1.1e-33 147.5 197 39.1
Nn5g29376 Nelumbo nucifera HOM05D005053 ORTHO05D006206 1.5e-33 147.1 221 34.8
Nitab4.5_0009901g0010 Nicotiana tabacum HOM05D005053 ORTHO05D006206 1.9e-33 146.7 211 37.4
SGA_v2.0_scaffold204G41608 Striga asiatica HOM05D005053 ORTHO05D006206 1.9e-33 146.7 224 37.1
SGA_v2.0_scaffold27G11440 Striga asiatica HOM05D005053 ORTHO05D006206 1.9e-33 146.7 224 37.1
TWI53G1273 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 1.9e-33 146.7 197 38.6
MSTRG.15402 Avicennia marina HOM05D005053 ORTHO05D006206 2.5e-33 146.4 232 35.3
Cre07.g334700 Chlamydomonas reinhardtii HOM05D005053 ORTHO05D006206 3.3e-33 146.0 261 34.9
BcaC03g18393 Brassica carinata HOM05D005053 ORTHO05D006206 4.3e-33 145.6 224 32.1
C02p64670 Brassica napus HOM05D005053 ORTHO05D006206 4.3e-33 145.6 224 32.1
Ciclev10026393m.g Citrus clementina HOM05D005053 ORTHO05D006206 4.3e-33 145.6 239 34.3
HanXRQChr07g0199901 Helianthus annuus HOM05D005053 ORTHO05D006206 4.3e-33 145.6 221 36.7
Solyc02g090330.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 5.6e-33 145.2 218 34.4
BcaB02g09970 Brassica carinata HOM05D005053 ORTHO05D006206 9.5e-33 144.4 218 34.4
A07p16970 Brassica napus HOM05D005053 ORTHO05D006206 9.5e-33 144.4 218 33.5
MBI16_g19902_MAGBIO Magnolia biondii HOM05D005053 ORTHO05D006206 9.5e-33 144.4 189 38.1
Sabra07G0034100 Salix brachista HOM05D005053 ORTHO05D006206 1.2e-32 144.1 199 38.2
BraA07t29424Z Brassica rapa HOM05D005053 ORTHO05D006206 1.6e-32 143.7 218 33.5
Dinv29944 Davidia involucrata HOM05D005053 ORTHO05D006206 1.6e-32 143.7 199 37.2
ECA238G1636 Erigeron canadensis HOM05D005053 ORTHO05D006206 1.6e-32 143.7 221 35.7
Os12g0428200 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 1.6e-32 143.7 221 35.7
BolC2t12528H Brassica oleracea HOM05D005053 ORTHO05D006206 2.1e-32 143.3 221 32.6
Rhsim08G0104900 Rhododendron simsii HOM05D005053 ORTHO05D006206 2.1e-32 143.3 243 35.4
Duzib264G0685 Durio zibethinus HOM05D005053 ORTHO05D006206 2.8e-32 142.9 197 37.6
Peaxi162Scf00993g00120 Petunia axillaris HOM05D005053 ORTHO05D006206 3.6e-32 142.5 200 37.0
Duzib264G0045 Durio zibethinus HOM05D005053 ORTHO05D006206 8.0e-32 141.4 197 37.6
Ah.02g124120 Amaranthus hybridus HOM05D005053 ORTHO05D006206 1.8e-31 140.2 206 34.5
Thhalv10005270m.g Eutrema salsugineum HOM05D005053 ORTHO05D006206 6.8e-31 138.3 207 30.9
Peaxi162Scf00049g01010 Petunia axillaris HOM05D005053 ORTHO05D006206 6.8e-31 138.3 193 36.3
BolC7t43007H Brassica oleracea HOM05D005053 ORTHO05D006206 2.0e-30 136.7 205 33.2
CiPaw.01G025900 Carya illinoinensis HOM05D005053 ORTHO05D006206 3.4e-30 136.0 199 36.2
PGSC0003DMG400010070 Solanum tuberosum HOM05D005053 ORTHO05D006206 1.3e-29 134.0 218 33.5
PRCOL_00006110 Prasinoderma coloniale HOM05D005053 ORTHO05D006206 4.9e-29 132.1 207 36.2
Os12g0446700 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 6.4e-29 131.7 195 37.9
AagrBONN_evm.TU.Sc2ySwM_369.468 Anthoceros agrestis HOM05D000050 ORTHO05D000771 1.1e-28 131.0 210 33.8
RhsimUnG0070600 Rhododendron simsii HOM05D005053 ORTHO05D006206 1.1e-28 131.0 230 34.3
Zm00001eb184240 Zea mays HOM05D005053 ORTHO05D006206 1.1e-28 131.0 220 34.1
CiPaw.02G011700 Carya illinoinensis HOM05D005053 ORTHO05D006206 2.1e-27 126.7 222 32.9
Dinv39902 Davidia involucrata HOM05D005053 ORTHO05D006206 4.6e-27 125.6 198 35.9
Lj7A44T18 Lonicera japonica HOM05D005053 ORTHO05D006206 1.7e-26 123.6 185 36.2
DCAR_025697 Daucus carota HOM05D005053 ORTHO05D006206 8.6e-26 121.3 172 34.3
CDE02G0556 Ceratophyllum demersum HOM05D005053 ORTHO05D006206 5.8e-22 108.6 128 39.8
Psat4g089040 Pisum sativum HOM05D005053 ORTHO05D006206 7.5e-22 108.2 180 35.0
Ah.03g144090 Amaranthus hybridus HOM05D005053 ORTHO05D006206 2.9e-21 106.3 215 30.7
TPR.G40637 Trifolium pratense HOM05D005053 ORTHO05D006206 1.9e-20 103.6 96 49.0
Nitab4.5_0002157g0070 Nicotiana tabacum HOM05D005053 ORTHO05D006206 1.2e-19 100.9 171 33.9
Psat4g088960 Pisum sativum HOM05D005053 ORTHO05D006206 8.6e-18 94.7 158 32.3
Sopen02g035010 Solanum pennellii HOM05D005053 ORTHO05D006206 8.1e-16 88.2 164 29.9
Prupe.7G140800 Prunus persica HOM05D005053 ORTHO05D006206 6.8e-15 85.1 163 29.4
Zm00001eb184160 Zea mays HOM05D005053 ORTHO05D006206 9.9e-14 81.3 90 42.2
FAN19G1388 Fragaria x ananassa HOM05D005053 ORTHO05D006206 1.1e-12 77.8 77 44.2
SGA_v2.0_scaffold15G07238 Striga asiatica HOM05D005053 ORTHO05D006206 1.2e-11 74.3 127 34.6
Nitab4.5_0003750g0060 Nicotiana tabacum HOM05D005053 ORTHO05D006206 2.1e-08 63.5 127 28.3
TPR.G672 Trifolium pratense HOM05D005053 ORTHO05D006206 3.6e-08 62.8 98 34.7


User provided reference genes

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