Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 0.0e+00 1233.0 610 100.0
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 3.9e-82 310.1 397 43.6
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 3.9e-82 310.1 396 43.2
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 8.6e-82 308.9 394 43.4
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 1.5e-81 308.1 402 41.8
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 1.5e-81 308.1 394 43.1
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 1.6e-80 304.7 395 42.8
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 2.1e-80 304.3 396 43.2
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 2.8e-80 303.9 392 42.9
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 3.6e-80 303.5 397 42.1
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 4.7e-80 303.1 392 43.6
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 8.0e-80 302.4 399 41.6
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 8.0e-80 302.4 397 42.1
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 8.0e-80 302.4 392 42.6
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 8.0e-80 302.4 397 41.8
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 1.4e-79 301.6 397 42.1
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 1.8e-79 301.2 396 42.4
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 3.1e-79 300.4 402 41.0
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 5.2e-79 299.7 393 42.5
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 1.5e-78 298.1 392 42.1
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 2.0e-78 297.7 390 42.6
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 2.0e-78 297.7 389 42.2
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 2.0e-78 297.7 392 42.6
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 2.0e-78 297.7 364 45.1
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 4.4e-78 296.6 395 41.8
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 4.4e-78 296.6 395 41.8
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 5.8e-78 296.2 397 42.3
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 7.5e-78 295.8 396 41.7
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 1.3e-77 295.0 391 42.2
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 2.2e-77 294.3 392 41.8
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 2.2e-77 294.3 392 41.3
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 2.2e-77 294.3 392 41.3
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 3.7e-77 293.5 390 41.8
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 4.9e-77 293.1 393 40.5
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 4.9e-77 293.1 391 41.2
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 6.4e-77 292.7 394 41.9
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 6.4e-77 292.7 394 41.6
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 8.3e-77 292.4 397 40.8
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 8.3e-77 292.4 401 42.1
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 1.4e-76 291.6 397 40.8
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 1.9e-76 291.2 391 40.7
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 2.4e-76 290.8 415 40.2
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 2.4e-76 290.8 401 42.9
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 5.4e-76 289.7 391 40.9
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 7.0e-76 289.3 415 40.0
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 1.6e-75 288.1 416 39.7
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 1.6e-75 288.1 397 41.1
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 3.5e-75 287.0 400 40.8
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 3.5e-75 287.0 392 41.1
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 3.5e-75 287.0 390 41.5
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 4.6e-75 286.6 395 41.0
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 6.0e-75 286.2 399 41.4
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 7.8e-75 285.8 392 41.6
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 7.8e-75 285.8 391 40.9
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 1.0e-74 285.4 389 40.9
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 1.7e-74 284.6 392 41.1
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 2.3e-74 284.3 396 40.7
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 2.3e-74 284.3 391 40.9
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 3.0e-74 283.9 395 40.8
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 3.0e-74 283.9 390 41.3
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 3.9e-74 283.5 408 41.4
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 3.9e-74 283.5 393 41.7
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 5.0e-74 283.1 390 41.3
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 5.0e-74 283.1 390 41.0
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 5.0e-74 283.1 390 41.0
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 6.6e-74 282.7 394 39.8
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 8.6e-74 282.3 390 40.8
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 1.5e-73 281.6 389 39.1
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 1.9e-73 281.2 389 39.6
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 2.5e-73 280.8 383 42.0
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 7.3e-73 279.3 390 39.7
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 9.5e-73 278.9 372 43.3
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 9.5e-73 278.9 389 40.1
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 3.6e-72 276.9 381 42.3
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 6.2e-72 276.2 328 43.6
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 1.1e-71 275.4 361 42.9
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 1.1e-71 275.4 362 42.8
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 1.4e-71 275.0 400 40.0
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 1.8e-71 274.6 406 39.7
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 2.3e-71 274.2 376 41.5
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 2.3e-71 274.2 393 39.2
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 2.3e-71 274.2 352 43.5
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 3.1e-71 273.9 395 39.5
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 2.6e-70 270.8 328 43.9
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 4.4e-70 270.0 389 38.0
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 5.8e-70 269.6 388 42.3
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 5.8e-70 269.6 395 39.5
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 5.8e-70 269.6 389 38.8
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 8.3e-69 265.8 409 39.1
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 1.9e-68 264.6 377 40.3
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 2.4e-68 264.2 409 38.9
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 4.1e-68 263.5 333 44.1
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 5.4e-68 263.1 407 40.5
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 6.0e-67 259.6 421 36.3
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 6.0e-67 259.6 405 39.3
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 8.6e-66 255.8 398 38.7
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 2.8e-64 250.8 395 38.0
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 1.2e-56 225.3 332 40.4
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 5.8e-54 216.5 367 36.2
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 7.1e-52 209.5 331 39.3
Psat7g108560 Pisum sativum HOM05D006195 ORTHO05D007710 1.2e-51 208.8 267 41.9
Dinv40483 Davidia involucrata HOM05D006195 ORTHO05D007710 3.5e-51 207.2 249 44.6
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 4.6e-51 206.8 424 31.6
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 1.0e-50 205.7 396 34.8
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 1.5e-49 201.8 312 40.4
PRCOL_00004057 Prasinoderma coloniale HOM05D006195 ORTHO05D007710 2.0e-46 191.4 348 41.1
Eucgr.L01396 Eucalyptus grandis HOM05D006195 ORTHO05D007710 2.9e-37 161.0 212 40.6
TPR.G37128 Trifolium pratense HOM05D006195 ORTHO05D007710 4.2e-36 157.1 195 43.6
HPP92_018057 Vanilla planifolia HOM05D006195 ORTHO05D007710 7.9e-35 152.9 216 40.3
Potri.004G034600 Populus trichocarpa HOM05D006195 ORTHO05D007710 1.8e-34 151.8 272 37.1
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.1e-31 142.5 184 41.8
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.1e-31 142.5 184 41.8
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 3.0e-26 124.4 190 38.9
Nn1g03899 Nelumbo nucifera HOM05D006195 ORTHO05D007710 2.4e-23 114.8 161 39.8
GSVIVG01003189001 Vitis vinifera HOM05D006195 ORTHO05D007710 3.8e-21 107.5 161 37.9
SalBow4G2205 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.0e-18 99.4 101 48.5
Nitab4.5_0003834g0010 Nicotiana tabacum HOM05D006195 ORTHO05D007710 8.7e-18 96.3 80 55.0
Dinv18994 Davidia involucrata HOM05D006195 ORTHO05D007710 2.4e-15 88.2 86 48.8
SEGI_17138 Sequoiadendron giganteum HOM05D006195 ORTHO05D007710 2.4e-15 88.2 78 53.8
Manes.10G084901 Manihot esculenta HOM05D006195 ORTHO05D007710 2.6e-14 84.7 142 37.3
SalBow1G7985 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.9e-12 78.6 114 40.4
SHI02125 Sapria himalayana HOM05D006195 ORTHO05D007710 3.2e-12 77.8 121 38.0
Thecc.06G199100 Theobroma cacao HOM05D006195 ORTHO05D007710 3.2e-12 77.8 121 36.4
CSS0050458 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D007710 7.2e-12 76.6 90 40.0
SHI48938 Sapria himalayana HOM05D006195 ORTHO05D007710 6.7e-10 70.1 124 37.9
Cfa025521 Carpinus fangiana HOM05D006195 ORTHO05D122002 3.3e-09 67.8 299 28.1


User provided reference genes

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