Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 1.0e-188 663.3 339 100.0
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 7.2e-54 215.3 299 42.8
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 2.2e-47 193.7 314 39.8
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 8.5e-47 191.8 290 40.7
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 1.9e-46 190.7 358 37.4
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 2.5e-46 190.3 291 40.2
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 3.2e-46 189.9 290 40.3
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 4.2e-46 189.5 284 39.8
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 5.5e-46 189.1 278 41.0
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 9.4e-46 188.3 290 39.0
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 9.4e-46 188.3 282 41.1
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 1.2e-45 188.0 335 38.5
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 1.2e-45 188.0 335 38.5
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 2.1e-45 187.2 290 40.0
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 6.1e-45 185.7 277 41.2
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 8.0e-45 185.3 281 40.9
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 1.0e-44 184.9 287 41.1
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 1.8e-44 184.1 292 38.0
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 1.8e-44 184.1 280 40.0
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 1.8e-44 184.1 290 37.9
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 1.8e-44 184.1 285 41.4
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 1.8e-44 184.1 288 39.2
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 2.3e-44 183.7 281 38.8
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 2.3e-44 183.7 288 39.2
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 3.9e-44 183.0 278 41.7
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 3.9e-44 183.0 320 37.2
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 5.2e-44 182.6 279 41.6
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 6.7e-44 182.2 290 39.3
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 6.7e-44 182.2 284 40.1
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 8.8e-44 181.8 306 36.9
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 1.1e-43 181.4 291 38.1
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 1.1e-43 181.4 280 40.4
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 1.1e-43 181.4 311 37.6
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 1.5e-43 181.0 347 36.3
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 1.5e-43 181.0 286 39.5
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 1.5e-43 181.0 293 38.2
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 2.0e-43 180.6 279 41.2
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 3.3e-43 179.9 311 38.9
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 3.3e-43 179.9 279 41.2
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 4.4e-43 179.5 281 41.3
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 4.4e-43 179.5 327 36.1
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 9.7e-43 178.3 280 41.8
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 1.3e-42 177.9 281 38.8
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 1.7e-42 177.6 279 38.4
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 1.7e-42 177.6 279 39.4
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 2.2e-42 177.2 278 40.6
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 2.2e-42 177.2 278 40.6
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 2.8e-42 176.8 281 38.4
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 3.7e-42 176.4 279 40.1
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 3.7e-42 176.4 280 40.4
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 3.7e-42 176.4 279 39.8
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 4.8e-42 176.0 279 39.4
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 6.3e-42 175.6 280 41.1
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 6.3e-42 175.6 276 39.9
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 1.4e-41 174.5 279 40.5
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 1.8e-41 174.1 279 40.1
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 5.3e-41 172.6 279 38.0
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 5.3e-41 172.6 277 39.7
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 5.3e-41 172.6 317 37.2
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 7.0e-41 172.2 279 39.1
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 7.0e-41 172.2 279 39.8
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 9.1e-41 171.8 279 38.0
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 1.6e-40 171.0 285 39.3
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 1.6e-40 171.0 278 37.1
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 2.0e-40 170.6 277 37.9
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 2.0e-40 170.6 300 39.0
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 3.5e-40 169.9 279 39.8
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 3.5e-40 169.9 298 36.9
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 3.5e-40 169.9 278 38.8
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 4.5e-40 169.5 278 37.8
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 5.9e-40 169.1 278 37.1
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.0e-39 168.3 281 37.0
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 1.0e-39 168.3 284 39.4
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 1.7e-39 167.5 281 39.5
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 1.7e-39 167.5 281 38.4
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 1.7e-39 167.5 299 37.8
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 2.9e-39 166.8 278 37.1
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 2.9e-39 166.8 279 38.0
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 3.8e-39 166.4 275 39.3
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 5.0e-39 166.0 281 37.0
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 5.0e-39 166.0 265 39.6
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 1.1e-38 164.9 300 37.0
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 2.5e-38 163.7 315 34.9
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 3.2e-38 163.3 296 35.8
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 2.1e-37 160.6 224 42.9
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 2.1e-37 160.6 209 45.0
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 6.1e-37 159.1 272 38.6
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 2.3e-36 157.1 197 45.2
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 5.2e-36 156.0 270 39.6
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 2.6e-35 153.7 351 32.2
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 9.7e-35 151.8 272 37.1
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 2.2e-34 150.6 281 37.0
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 3.7e-34 149.8 290 39.3
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 4.8e-34 149.4 223 39.9
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 1.8e-33 147.5 272 35.7
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 1.6e-32 144.4 352 32.4
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 3.8e-31 139.8 290 33.8
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 5.0e-31 139.4 278 34.9
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 1.1e-30 138.3 313 35.1
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 4.2e-30 136.3 280 35.4
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.6e-29 133.3 210 38.1
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.5e-27 127.9 154 42.9
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 2.3e-23 114.0 136 44.1
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 1.5e-19 101.3 164 36.0
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 5.2e-12 76.3 158 34.8
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 2.0e-11 74.3 144 36.1
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 1.3e-10 71.6 156 34.0
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 9.2e-09 65.5 60 48.3
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 5.0e-07 59.7 155 32.9
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 6.6e-07 59.3 146 32.2
PRCOL_00002708 Prasinoderma coloniale HOM05D006539 ORTHO05D008694 4.3e-06 56.6 222 26.6
PRCOL_00003145 Prasinoderma coloniale HOM05D005801 ORTHO05D008555 9.5e-06 55.5 196 30.6


User provided reference genes

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