Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO06G251 Micromonas commoda HOM05D004999 ORTHO05D007513 1.3e-258 896.0 500 100.0
Pp3c13_19410 Physcomitrium patens HOM05D004999 ORTHO05D007513 8.9e-61 238.8 456 36.6
Os04g0112300 Oryza sativa ssp. japonica HOM05D004999 ORTHO05D007513 2.6e-60 237.3 463 40.4
arahy.Tifrunner.gnm1.ann1.A5JBZH Arachis hypogaea HOM05D004999 ORTHO05D007513 3.4e-60 236.9 452 35.4
arahy.Tifrunner.gnm1.ann1.BI3E2S Arachis hypogaea HOM05D004999 ORTHO05D007513 3.8e-59 233.4 452 35.4
Nn1g05879 Nelumbo nucifera HOM05D004999 ORTHO05D007513 4.9e-59 233.0 462 35.9
Sc02g0008530 Simmondsia chinensis HOM05D004999 ORTHO05D007513 4.9e-59 233.0 464 36.9
PGR083G2044 Punica granatum HOM05D004999 ORTHO05D007513 7.8e-57 225.7 479 35.5
Atru.chr13.305 Acer truncatum HOM05D004999 ORTHO05D007513 1.0e-56 225.3 451 36.8
CAN.G311.21 Capsicum annuum HOM05D004999 ORTHO05D007513 1.7e-56 224.6 455 36.7
BraA03t11740Z Brassica rapa HOM05D004999 ORTHO05D007513 2.3e-56 224.2 448 36.8
Gohir.D05G189800 Gossypium hirsutum HOM05D004999 ORTHO05D007513 2.3e-56 224.2 462 35.5
VMungo0647G0227 Vigna mungo HOM05D004999 ORTHO05D007513 2.3e-56 224.2 488 34.8
Zm00001eb142530 Zea mays HOM05D004999 ORTHO05D007513 2.3e-56 224.2 471 35.0
Glyma.17G257600 Glycine max HOM05D004999 ORTHO05D007513 3.9e-56 223.4 466 33.9
Lj5g0025890 Lotus japonicus HOM05D004999 ORTHO05D007513 3.9e-56 223.4 454 35.7
RcHm_v2.0_Chr6g0302731 Rosa chinensis HOM05D004999 ORTHO05D007513 3.9e-56 223.4 454 35.5
Gorai.009G195100 Gossypium raimondii HOM05D004999 ORTHO05D007513 1.1e-55 221.9 462 35.3
TWI56G0255 Tripterygium wilfordii HOM05D004999 ORTHO05D007513 1.1e-55 221.9 451 36.1
HPP92_027505 Vanilla planifolia HOM05D004999 ORTHO05D007513 1.1e-55 221.9 471 35.5
A03p25340 Brassica napus HOM05D004999 ORTHO05D007513 1.9e-55 221.1 448 36.8
Aqoxy5G01776 Aquilegia oxysepala HOM05D004999 ORTHO05D007513 2.5e-55 220.7 482 35.7
Ca_13413_v3 Cicer arietinum L. HOM05D004999 ORTHO05D007513 2.5e-55 220.7 461 34.9
Ciclev10001119m.g Citrus clementina HOM05D004999 ORTHO05D007513 2.5e-55 220.7 466 34.8
BraA04t18860Z Brassica rapa HOM05D004999 ORTHO05D007513 3.3e-55 220.3 451 36.4
Carub.0004s2839 Capsella rubella HOM05D004999 ORTHO05D007513 3.3e-55 220.3 447 36.2
Lj5g0016888 Lotus japonicus HOM05D004999 ORTHO05D007513 3.3e-55 220.3 460 35.4
Solyc04g081360.3 Solanum lycopersicum HOM05D004999 ORTHO05D007513 3.3e-55 220.3 456 36.2
Prupe.1G366700 Prunus persica HOM05D004999 ORTHO05D007513 4.3e-55 219.9 453 34.9
MD08G1013700 Malus domestica HOM05D004999 ORTHO05D007513 5.6e-55 219.5 460 34.8
Sopen04g034980 Solanum pennellii HOM05D004999 ORTHO05D007513 7.3e-55 219.2 457 35.4
CANSAT01G2959 Cannabis sativa HOM05D004999 ORTHO05D007513 9.6e-55 218.8 456 35.1
Medtr1g024920 Medicago truncatula HOM05D004999 ORTHO05D007513 9.6e-55 218.8 477 35.2
THA.LOC104806888 Tarenaya hassleriana HOM05D004999 ORTHO05D007513 9.6e-55 218.8 461 35.1
CsaV3_2G029460 Cucumis sativus L. HOM05D004999 ORTHO05D007513 1.3e-54 218.4 455 35.2
PGSC0003DMG400003779 Solanum tuberosum HOM05D004999 ORTHO05D007513 1.3e-54 218.4 454 36.6
AagrBONN_evm.TU.Sc2ySwM_344.355 Anthoceros agrestis HOM05D004999 ORTHO05D007513 1.6e-54 218.0 491 32.8
BcaB01g03255 Brassica carinata HOM05D004999 ORTHO05D007513 1.6e-54 218.0 447 35.3
A04p33990 Brassica napus HOM05D004999 ORTHO05D007513 1.6e-54 218.0 451 36.1
ClCG08G014370 Citrullus lanatus HOM05D004999 ORTHO05D007513 2.8e-54 217.2 451 34.6
Potri.002G023300 Populus trichocarpa HOM05D004999 ORTHO05D007513 2.8e-54 217.2 454 35.0
FAN27G0904 Fragaria x ananassa HOM05D004999 ORTHO05D007513 3.6e-54 216.9 456 35.3
BcaB02g09016 Brassica carinata HOM05D004999 ORTHO05D007513 4.8e-54 216.5 447 36.5
MD15G1013300 Malus domestica HOM05D004999 ORTHO05D007513 4.8e-54 216.5 460 35.4
Cre12.g543100 Chlamydomonas reinhardtii HOM05D004999 ORTHO05D007513 6.2e-54 216.1 481 41.8
FvH4_2g38570 Fragaria vesca HOM05D004999 ORTHO05D007513 6.2e-54 216.1 456 34.9
BcaC01g05108 Brassica carinata HOM05D004999 ORTHO05D007513 8.1e-54 215.7 448 36.4
BcaC02g07075 Brassica carinata HOM05D004999 ORTHO05D007513 8.1e-54 215.7 444 35.8
BolC4t28677H Brassica oleracea HOM05D004999 ORTHO05D007513 8.1e-54 215.7 444 35.8
Dinv39509 Davidia involucrata HOM05D004999 ORTHO05D007513 8.1e-54 215.7 466 35.2
Lalb_Chr24g0398721 Lupinus albus HOM05D004999 ORTHO05D007513 8.1e-54 215.7 465 34.0
Phvul.001G007200 Phaseolus vulgaris HOM05D004999 ORTHO05D007513 1.1e-53 215.3 488 33.2
C04p71790 Brassica napus HOM05D004999 ORTHO05D007513 1.4e-53 214.9 447 35.6
AT2G45730 Arabidopsis thaliana HOM05D004999 ORTHO05D007513 2.4e-53 214.2 447 35.3
Cc10_g01760 Coffea canephora HOM05D004999 ORTHO05D007513 2.4e-53 214.2 456 33.8
AL4G44920 Arabidopsis lyrata HOM05D004999 ORTHO05D007513 3.1e-53 213.8 450 34.9
MELO3C011005.2 Cucumis melo HOM05D004999 ORTHO05D007513 3.1e-53 213.8 454 34.8
Oeu020873.1 Olea europaea HOM05D004999 ORTHO05D007513 3.1e-53 213.8 452 34.7
Sed0007289 Sechium edule HOM05D004999 ORTHO05D007513 3.1e-53 213.8 453 35.1
Thecc.08G043100 Theobroma cacao HOM05D004999 ORTHO05D007513 3.1e-53 213.8 462 34.8
Thhalv10001448m.g Eutrema salsugineum HOM05D004999 ORTHO05D007513 4.0e-53 213.4 447 35.8
Gohir.A05G186900 Gossypium hirsutum HOM05D004999 ORTHO05D007513 4.0e-53 213.4 462 34.6
C03p30250 Brassica napus HOM05D004999 ORTHO05D007513 5.3e-53 213.0 448 35.7
Duzib093G1482 Durio zibethinus HOM05D004999 ORTHO05D007513 1.5e-52 211.5 448 35.0
Mapoly0050s0121 Marchantia polymorpha HOM05D004999 ORTHO05D007513 2.0e-52 211.1 520 35.4
TPR.G30999 Trifolium pratense HOM05D004999 ORTHO05D007513 2.0e-52 211.1 474 33.5
TAR381G0667 Trochodendron aralioides HOM05D004999 ORTHO05D007513 2.0e-52 211.1 482 34.6
CARHR140980 Cardamine hirsuta HOM05D004999 ORTHO05D007513 2.6e-52 210.7 448 35.5
Sp4g27780 Schrenkiella parvula HOM05D004999 ORTHO05D007513 2.6e-52 210.7 448 35.0
ECA238G1075 Erigeron canadensis HOM05D004999 ORTHO05D007513 3.4e-52 210.3 467 33.6
SalBow7G4700 Salvia bowleyana HOM05D004999 ORTHO05D007513 5.8e-52 209.5 454 35.2
GSVIVG01009891001 Vitis vinifera HOM05D004999 ORTHO05D007513 7.6e-52 209.1 470 33.6
Rhsim06G0021900 Rhododendron simsii HOM05D004999 ORTHO05D007513 9.9e-52 208.8 455 34.5
Aa31LG9G12650 Aethionema arabicum HOM05D004999 ORTHO05D007513 1.3e-51 208.4 450 33.6
Duzib041G0279 Durio zibethinus HOM05D004999 ORTHO05D007513 1.7e-51 208.0 463 34.1
Lj4A25T52 Lonicera japonica HOM05D004999 ORTHO05D007513 1.7e-51 208.0 454 34.1
QL02p011429 Quercus lobata HOM05D004999 ORTHO05D007513 1.7e-51 208.0 476 35.3
ATR0767G249 Amborella trichopoda HOM05D004999 ORTHO05D007513 2.9e-51 207.2 470 33.8
SMO367G0765 Selaginella moellendorffii HOM05D004999 ORTHO05D007513 2.9e-51 207.2 475 40.0
Cfa013940 Carpinus fangiana HOM05D004999 ORTHO05D007513 1.1e-50 205.3 450 34.2
Manes.05G148301 Manihot esculenta HOM05D004999 ORTHO05D007513 1.1e-50 205.3 429 36.1
Migut.C00822 Erythranthe guttata HOM05D004999 ORTHO05D007513 1.4e-50 204.9 475 33.9
CSS0048815 Camellia sinensis var. sinensis HOM05D004999 ORTHO05D007513 1.9e-50 204.5 457 33.9
PSO700G0267 Papaver somniferum HOM05D004999 ORTHO05D007513 4.2e-50 203.4 477 33.5
Actinidia15416 Actinidia chinensis HOM05D004999 ORTHO05D007513 5.4e-50 203.0 450 34.0
PSO170G1336 Papaver somniferum HOM05D004999 ORTHO05D007513 7.1e-50 202.6 460 34.3
SGA_v2.0_scaffold11G05913 Striga asiatica HOM05D004999 ORTHO05D007513 9.3e-50 202.2 452 33.8
Glyma.14G218500 Glycine max HOM05D004999 ORTHO05D007513 1.2e-49 201.8 370 35.1
Peaxi162Scf00438g00629 Petunia axillaris HOM05D004999 ORTHO05D007513 3.5e-49 200.3 415 36.1
Eucgr.F01642 Eucalyptus grandis HOM05D004999 ORTHO05D007513 7.9e-49 199.1 430 35.3
TPR.G34334 Trifolium pratense HOM05D004999 ORTHO05D007513 1.3e-48 198.4 432 33.3
CiPaw.08G065700 Carya illinoinensis HOM05D004999 ORTHO05D007513 2.3e-48 197.6 469 32.6
TWI36G1418 Tripterygium wilfordii HOM05D004999 ORTHO05D007513 2.3e-48 197.6 451 34.4
Nitab4.5_0001540g0030 Nicotiana tabacum HOM05D004999 ORTHO05D007513 3.0e-48 197.2 451 34.4
EL10Ac6g14553 Beta vulgaris HOM05D004999 ORTHO05D007513 3.9e-48 196.8 462 34.0
HanXRQChr14g0430231 Helianthus annuus HOM05D004999 ORTHO05D007513 8.7e-48 195.7 460 34.6
FAN15G0085 Fragaria x ananassa HOM05D004999 ORTHO05D007513 1.9e-47 194.5 469 33.9
DCAR_017472 Daucus carota HOM05D004999 ORTHO05D007513 7.3e-47 192.6 447 32.7
BolC3t15374H Brassica oleracea HOM05D004999 ORTHO05D007513 9.6e-47 192.2 413 35.4
unitig_749.g13859 Utricularia gibba HOM05D004999 ORTHO05D007513 9.6e-47 192.2 469 32.6
Ah.04g153930 Amaranthus hybridus HOM05D004999 ORTHO05D007513 3.6e-46 190.3 458 33.4
Haze_22624 Corylus avellana HOM05D004999 ORTHO05D007513 8.1e-46 189.1 472 32.8
CDE09G1336 Ceratophyllum demersum HOM05D004999 ORTHO05D007513 1.8e-45 188.0 469 32.2
CBR_g45432 Chara braunii HOM05D004999 ORTHO05D007513 3.1e-45 187.2 629 29.1
Hund05204 Selenicereus undatus HOM05D004999 ORTHO05D007513 9.0e-45 185.7 531 29.9
Dinv31836 Davidia involucrata HOM05D004999 ORTHO05D007513 7.6e-44 182.6 460 33.3
Lsat_1_v5_gn_2_8681 Lactuca sativa HOM05D004999 ORTHO05D007513 2.2e-43 181.0 429 31.7
vmacro21722 Vaccinium macrocarpon HOM05D004999 ORTHO05D007513 2.2e-43 181.0 520 29.8
PRCOL_00001952 Prasinoderma coloniale HOM05D004999 ORTHO05D007513 2.9e-43 180.6 455 35.6
Sabra02G0019000 Salix brachista HOM05D004999 ORTHO05D007513 1.5e-39 168.3 436 35.1
COL.COLO4_26158 Corchorus olitorius HOM05D004999 ORTHO05D007513 3.3e-39 167.2 404 31.9
AUR62002963 Chenopodium quinoa HOM05D004999 ORTHO05D007513 9.6e-39 165.6 465 31.4
Psat5g146560 Pisum sativum HOM05D004999 ORTHO05D007513 3.7e-38 163.7 269 39.0
HPP92_022409 Vanilla planifolia HOM05D004999 ORTHO05D007513 8.1e-38 162.5 259 39.8
AUR62007769 Chenopodium quinoa HOM05D004999 ORTHO05D007513 1.8e-37 161.4 457 31.1
FAN20G3168 Fragaria x ananassa HOM05D004999 ORTHO05D007513 9.0e-37 159.1 448 31.0
Potri.005G238200 Populus trichocarpa HOM05D004999 ORTHO05D007513 2.6e-36 157.5 319 34.5
MBI09_g25164_MAGBIO Magnolia biondii HOM05D004999 ORTHO05D007513 1.8e-24 118.2 293 32.4
Actinidia16981 Actinidia chinensis HOM05D004999 ORTHO05D007513 6.3e-22 109.8 242 33.5
Cpa.g.sc8.166 Carica papaya HOM05D004999 ORTHO05D007513 1.2e-20 105.5 394 30.5
Zm00001eb363800 Zea mays HOM05D004999 ORTHO05D007513 2.0e-20 104.8 148 39.9
Thecc.08G043300 Theobroma cacao HOM05D004999 ORTHO05D007513 1.3e-14 85.5 90 52.2
Oeu054699.1 Olea europaea HOM05D004999 ORTHO05D007513 3.3e-07 60.8 416 24.0
Psat6g004000 Pisum sativum HOM05D000009 ORTHO05D000008 1.7e-06 58.5 65 47.7


User provided reference genes

Program Settings