Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO06G168 Micromonas commoda HOM05D005551 ORTHO05D034416 3.1e-281 971.1 473 100.0
Mapoly0090s0035 Marchantia polymorpha HOM05D005551 ORTHO05D034416 8.4e-77 292.0 550 35.5
Cre12.g499600 Chlamydomonas reinhardtii HOM05D005551 ORTHO05D034416 1.5e-73 281.2 540 35.4
Haze_26851 Corylus avellana HOM05D005551 ORTHO05D007207 3.6e-27 127.1 304 28.3
HanXRQChr14g0433441 Helianthus annuus HOM05D005551 ORTHO05D007207 8.3e-24 115.9 445 27.4
CBR_g4414 Chara braunii HOM05D005551 ORTHO05D007207 1.1e-23 115.5 437 27.9
CBR_g45931 Chara braunii HOM05D005551 ORTHO05D007207 1.1e-23 115.5 437 27.9
HPP92_018084 Vanilla planifolia HOM05D005551 ORTHO05D007207 2.0e-22 111.3 443 25.5
COL.COLO4_33261 Corchorus olitorius HOM05D005551 ORTHO05D007207 3.5e-22 110.5 442 26.0
Cre12.g525650 Chlamydomonas reinhardtii HOM05D005551 ORTHO05D007207 1.0e-21 109.0 484 26.4
DCAR_021423 Daucus carota HOM05D005551 ORTHO05D007207 2.3e-21 107.8 441 25.4
Nn2g10251 Nelumbo nucifera HOM05D005551 ORTHO05D007207 2.9e-21 107.5 446 26.2
Cc02_g08840 Coffea canephora HOM05D005551 ORTHO05D007207 6.6e-21 106.3 478 25.7
Thecc.09G251700 Theobroma cacao HOM05D005551 ORTHO05D007207 6.6e-21 106.3 442 26.0
SMO347G0159 Selaginella moellendorffii HOM05D005551 ORTHO05D007207 8.6e-21 105.9 471 26.5
Hund27398 Selenicereus undatus HOM05D005551 ORTHO05D007207 1.1e-20 105.5 441 25.6
unitig_749.g13431 Utricularia gibba HOM05D005551 ORTHO05D007207 1.5e-20 105.1 441 24.9
SEGI_36821 Sequoiadendron giganteum HOM05D005551 ORTHO05D007207 1.9e-20 104.8 447 25.7
PSO339G0296 Papaver somniferum HOM05D005551 ORTHO05D007207 2.5e-20 104.4 445 25.6
AagrBONN_evm.TU.Sc2ySwM_117.1158 Anthoceros agrestis HOM05D005551 ORTHO05D007207 4.2e-20 103.6 298 28.2
PSO384G1940 Papaver somniferum HOM05D005551 ORTHO05D007207 4.2e-20 103.6 445 25.4
PGR119G1886 Punica granatum HOM05D005551 ORTHO05D007207 4.2e-20 103.6 441 25.9
Lsat_1_v5_gn_1_112501 Lactuca sativa HOM05D005551 ORTHO05D007207 5.5e-20 103.2 428 26.9
Atru.chr4.868 Acer truncatum HOM05D005551 ORTHO05D007207 7.2e-20 102.8 446 25.8
ECA234G2543 Erigeron canadensis HOM05D005551 ORTHO05D007207 1.2e-19 102.1 448 26.8
ATR1127G182 Amborella trichopoda HOM05D005551 ORTHO05D007207 3.6e-19 100.5 439 24.6
MCO11G678 Micromonas commoda HOM05D005551 ORTHO05D007207 3.6e-19 100.5 251 28.7
Cfa010168 Carpinus fangiana HOM05D005551 ORTHO05D007207 6.1e-19 99.8 442 24.7
Eucgr.B03759 Eucalyptus grandis HOM05D005551 ORTHO05D007207 6.1e-19 99.8 446 27.4
Aqoxy2G00719 Aquilegia oxysepala HOM05D005551 ORTHO05D007207 8.0e-19 99.4 441 25.9
MSTRG.22962 Avicennia marina HOM05D005551 ORTHO05D007207 8.0e-19 99.4 444 25.5
MD15G1421300 Malus domestica HOM05D005551 ORTHO05D007207 8.0e-19 99.4 487 25.1
Zm00001eb195480 Zea mays HOM05D005551 ORTHO05D007207 8.0e-19 99.4 437 26.8
Lj2C43G5 Lonicera japonica HOM05D005551 ORTHO05D007207 1.0e-18 99.0 440 25.2
CSS0006172 Camellia sinensis var. sinensis HOM05D005551 ORTHO05D007207 1.4e-18 98.6 443 24.6
CSS0046738 Camellia sinensis var. sinensis HOM05D005551 ORTHO05D007207 1.4e-18 98.6 443 24.6
RcHm_v2.0_Chr1g0329781 Rosa chinensis HOM05D005551 ORTHO05D007207 1.4e-18 98.6 443 24.6
Gohir.A13G219500 Gossypium hirsutum HOM05D005551 ORTHO05D007207 2.3e-18 97.8 443 25.1
HanXRQChr05g0144321 Helianthus annuus HOM05D005551 ORTHO05D007207 2.3e-18 97.8 249 30.5
TAR369G0326 Trochodendron aralioides HOM05D005551 ORTHO05D007207 2.3e-18 97.8 471 25.7
Cpa.g.sc34.204 Carica papaya HOM05D005551 ORTHO05D007207 3.0e-18 97.4 477 24.9
Lalb_Chr20g0119901 Lupinus albus HOM05D005551 ORTHO05D007207 4.0e-18 97.1 447 25.3
Prupe.1G566600 Prunus persica HOM05D005551 ORTHO05D007207 4.0e-18 97.1 473 25.4
QL01p016086 Quercus lobata HOM05D005551 ORTHO05D007207 5.2e-18 96.7 442 25.6
Gorai.013G254300 Gossypium raimondii HOM05D005551 ORTHO05D007207 6.8e-18 96.3 444 25.0
Manes.02G135300 Manihot esculenta HOM05D005551 ORTHO05D007207 6.8e-18 96.3 474 24.7
Atru.chr2.2010 Acer truncatum HOM05D005551 ORTHO05D007207 8.9e-18 95.9 444 26.6
SGA_v2.0_scaffold25G10959 Striga asiatica HOM05D005551 ORTHO05D007207 8.9e-18 95.9 428 25.2
Os12g0287300 Oryza sativa ssp. japonica HOM05D005551 ORTHO05D007207 1.2e-17 95.5 330 28.2
Actinidia24636 Actinidia chinensis HOM05D005551 ORTHO05D007207 1.5e-17 95.1 443 24.8
Sabra09G0049100 Salix brachista HOM05D005551 ORTHO05D007207 1.5e-17 95.1 456 25.4
TWI75G1278 Tripterygium wilfordii HOM05D005551 ORTHO05D007207 2.0e-17 94.7 487 24.6
CDE04G0986 Ceratophyllum demersum HOM05D005551 ORTHO05D007207 2.6e-17 94.4 442 25.6
CANSAT54G1233 Cannabis sativa HOM05D005551 ORTHO05D007207 3.4e-17 94.0 444 25.7
Mapoly0010s0063 Marchantia polymorpha HOM05D005551 ORTHO05D007207 3.4e-17 94.0 439 25.7
Migut.I00341 Erythranthe guttata HOM05D005551 ORTHO05D007207 4.4e-17 93.6 351 23.6
Gohir.D13G223200 Gossypium hirsutum HOM05D005551 ORTHO05D007207 4.4e-17 93.6 443 24.8
Phvul.006G131100 Phaseolus vulgaris HOM05D005551 ORTHO05D007207 4.4e-17 93.6 444 24.8
FAN03G2212 Fragaria x ananassa HOM05D005551 ORTHO05D007207 5.7e-17 93.2 444 24.3
CiPaw.13G146700 Carya illinoinensis HOM05D005551 ORTHO05D007207 7.5e-17 92.8 476 24.4
Glyma.15G127400 Glycine max HOM05D005551 ORTHO05D007207 7.5e-17 92.8 447 25.1
Medtr3g083980 Medicago truncatula HOM05D005551 ORTHO05D007207 9.8e-17 92.4 445 25.6
Thhalv10007548m.g Eutrema salsugineum HOM05D005551 ORTHO05D007207 1.3e-16 92.0 439 25.3
Potri.009G066000 Populus trichocarpa HOM05D005551 ORTHO05D007207 1.3e-16 92.0 489 24.7
Haze_23554 Corylus avellana HOM05D005551 ORTHO05D007207 1.7e-16 91.7 275 26.9
vmacro01506 Vaccinium macrocarpon HOM05D005551 ORTHO05D007207 1.7e-16 91.7 451 24.4
Carub.0001s0785 Capsella rubella HOM05D005551 ORTHO05D007207 2.2e-16 91.3 446 24.0
FvH4_7g04510 Fragaria vesca HOM05D005551 ORTHO05D007207 2.2e-16 91.3 440 23.0
FAN06G0985 Fragaria x ananassa HOM05D005551 ORTHO05D007207 2.8e-16 90.9 440 23.0
FAN06G4389 Fragaria x ananassa HOM05D005551 ORTHO05D007207 2.8e-16 90.9 440 23.0
Glyma.09G021000 Glycine max HOM05D005551 ORTHO05D007207 2.8e-16 90.9 447 24.6
Peaxi162Scf00015g00309 Petunia axillaris HOM05D005551 ORTHO05D007207 2.8e-16 90.9 443 24.2
BraA06t23757Z Brassica rapa HOM05D005551 ORTHO05D007207 3.7e-16 90.5 437 24.7
Rhsim11G0088800 Rhododendron simsii HOM05D005551 ORTHO05D007207 3.7e-16 90.5 274 27.4
THA.LOC104816954 Tarenaya hassleriana HOM05D005551 ORTHO05D007207 3.7e-16 90.5 476 24.6
C05p06600 Brassica napus HOM05D005551 ORTHO05D007207 4.9e-16 90.1 433 24.9
BolC5t29420H Brassica oleracea HOM05D005551 ORTHO05D007207 4.9e-16 90.1 433 24.9
Lj6g0008086 Lotus japonicus HOM05D005551 ORTHO05D007207 4.9e-16 90.1 369 24.9
Aa31sc55G30 Aethionema arabicum HOM05D005551 ORTHO05D007207 6.3e-16 89.7 425 25.2
Pp3c24_10350 Physcomitrium patens HOM05D005551 ORTHO05D007207 6.3e-16 89.7 444 24.8
VMungo0540G2337 Vigna mungo HOM05D005551 ORTHO05D007207 6.3e-16 89.7 444 24.3
Ca_16399_v3 Cicer arietinum L. HOM05D005551 ORTHO05D007207 8.3e-16 89.4 447 25.1
Ciclev10015188m.g Citrus clementina HOM05D005551 ORTHO05D007207 8.3e-16 89.4 445 24.0
FvH4_7g04540 Fragaria vesca HOM05D005551 ORTHO05D007207 8.3e-16 89.4 441 23.6
Sp1g07150 Schrenkiella parvula HOM05D005551 ORTHO05D007207 1.1e-15 89.0 439 24.6
AT1G08490 Arabidopsis thaliana HOM05D005551 ORTHO05D007207 1.4e-15 88.6 441 23.6
Duzib150G0889 Durio zibethinus HOM05D005551 ORTHO05D007207 1.4e-15 88.6 299 26.4
TPR.G8526 Trifolium pratense HOM05D005551 ORTHO05D007207 4.1e-15 87.0 443 24.8
Psat5g100640 Pisum sativum HOM05D005551 ORTHO05D007207 2.0e-14 84.7 304 26.3
FAN10G0679 Fragaria x ananassa HOM05D005551 ORTHO05D007207 7.8e-14 82.8 329 25.5
Dinv24609 Davidia involucrata HOM05D005551 ORTHO05D007207 1.3e-13 82.0 299 25.8
SGA_v2.0_scaffold28G11755 Striga asiatica HOM05D005551 ORTHO05D007207 2.3e-13 81.3 423 23.2
AL1G18920 Arabidopsis lyrata HOM05D005551 ORTHO05D007207 6.6e-13 79.7 247 26.3
arahy.Tifrunner.gnm1.ann1.ADF2XW Arachis hypogaea HOM05D005551 ORTHO05D007207 6.6e-13 79.7 358 26.3
Gohir.D13G223050 Gossypium hirsutum HOM05D005551 ORTHO05D007207 1.5e-12 78.6 247 25.9
arahy.Tifrunner.gnm1.ann1.HLYA7R Arachis hypogaea HOM05D005551 ORTHO05D007207 1.9e-12 78.2 358 26.0
CARHR008380 Cardamine hirsuta HOM05D005551 ORTHO05D007207 1.9e-12 78.2 265 26.4
arahy.Tifrunner.gnm1.ann1.JZUI2V Arachis hypogaea HOM05D005551 ORTHO05D007207 3.3e-12 77.4 358 26.0
SalBow5G3184 Salvia bowleyana HOM05D005551 ORTHO05D007207 9.8e-09 65.9 178 27.5
Actinidia29559 Actinidia chinensis HOM05D005551 ORTHO05D007207 2.2e-08 64.7 185 27.6
EL10Ac1g00799 Beta vulgaris HOM05D005551 ORTHO05D007207 3.7e-08 63.9 133 28.6
Sed0004770 Sechium edule HOM05D005551 ORTHO05D007207 8.3e-08 62.8 160 26.9
arahy.Tifrunner.gnm1.ann1.X0E2H2 Arachis hypogaea HOM05D005551 ORTHO05D007207 1.1e-07 62.4 135 31.9


User provided reference genes

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