Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO06G148 Micromonas commoda HOM05D002468 ORTHO05D009172 1.8e-162 575.9 293 100.0
PRCOL_00003949 Prasinoderma coloniale HOM05D002468 ORTHO05D009172 2.6e-44 183.3 192 52.6
PRCOL_00000716 Prasinoderma coloniale HOM05D002468 ORTHO05D009172 4.5e-36 156.0 183 47.5
VMungo1383G2635 Vigna mungo HOM05D002468 ORTHO05D009172 1.6e-33 147.5 156 51.3
MD16G1141800 Malus domestica HOM05D002468 ORTHO05D009172 2.7e-33 146.7 156 50.0
Thecc.02G191300 Theobroma cacao HOM05D002468 ORTHO05D009172 3.5e-33 146.4 156 49.4
Carub.0006s1157 Capsella rubella HOM05D002468 ORTHO05D009172 4.6e-33 146.0 156 50.0
Cfa009456 Carpinus fangiana HOM05D002468 ORTHO05D009172 4.6e-33 146.0 159 49.1
Manes.08G100500 Manihot esculenta HOM05D002468 ORTHO05D009172 4.6e-33 146.0 156 50.0
vmacro01016 Vaccinium macrocarpon HOM05D002468 ORTHO05D009172 4.6e-33 146.0 156 49.4
Phvul.008G009400 Phaseolus vulgaris HOM05D002468 ORTHO05D009172 6.0e-33 145.6 156 50.6
MSTRG.8059 Avicennia marina HOM05D002468 ORTHO05D009172 1.8e-32 144.1 156 48.7
Glyma.18G292600 Glycine max HOM05D002468 ORTHO05D009172 1.8e-32 144.1 156 50.0
Haze_12509 Corylus avellana HOM05D002468 ORTHO05D005371 2.3e-32 143.7 159 48.4
Rhsim12G0017000 Rhododendron simsii HOM05D002468 ORTHO05D009172 2.3e-32 143.7 156 47.4
AT5G13410 Arabidopsis thaliana HOM05D002468 ORTHO05D009172 3.0e-32 143.3 156 49.4
FvH4_4g22550 Fragaria vesca HOM05D002468 ORTHO05D009172 3.0e-32 143.3 156 48.7
Zm00001eb040970 Zea mays HOM05D002468 ORTHO05D009172 3.0e-32 143.3 156 48.1
AL6G24030 Arabidopsis lyrata HOM05D002468 ORTHO05D009172 5.1e-32 142.5 156 48.7
CARHR200020 Cardamine hirsuta HOM05D002468 ORTHO05D009172 5.1e-32 142.5 156 50.0
FAN07G2873 Fragaria x ananassa HOM05D002468 ORTHO05D009172 5.1e-32 142.5 156 48.7
FAN17G0051 Fragaria x ananassa HOM05D002468 ORTHO05D005371 5.1e-32 142.5 156 48.7
RcHm_v2.0_Chr4g0428781 Rosa chinensis HOM05D002468 ORTHO05D009172 5.1e-32 142.5 156 48.1
Cpa.g.sc38.65 Carica papaya HOM05D002468 ORTHO05D009172 6.7e-32 142.1 156 48.7
Ciclev10005642m.g Citrus clementina HOM05D002468 ORTHO05D009172 6.7e-32 142.1 156 48.7
Eucgr.G01979 Eucalyptus grandis HOM05D002468 ORTHO05D009172 6.7e-32 142.1 156 48.1
THA.LOC104825606 Tarenaya hassleriana HOM05D002468 ORTHO05D009172 6.7e-32 142.1 156 50.6
Sed0016874 Sechium edule HOM05D002468 ORTHO05D009172 8.7e-32 141.7 156 48.7
CDE06G1087 Ceratophyllum demersum HOM05D002468 ORTHO05D009172 1.1e-31 141.4 156 48.1
Potri.001G068300 Populus trichocarpa HOM05D002468 ORTHO05D009172 1.1e-31 141.4 156 50.0
BcaNung01882 Brassica carinata HOM05D002468 ORTHO05D009172 1.5e-31 141.0 156 48.1
Gohir.D04G141000 Gossypium hirsutum HOM05D002468 ORTHO05D009172 1.5e-31 141.0 156 47.4
Gorai.012G126000 Gossypium raimondii HOM05D002468 ORTHO05D009172 1.5e-31 141.0 156 47.4
Actinidia22113 Actinidia chinensis HOM05D002468 ORTHO05D005371 1.9e-31 140.6 156 47.4
Migut.K01048 Erythranthe guttata HOM05D002468 ORTHO05D009172 1.9e-31 140.6 156 50.0
Peaxi162Scf00842g00418 Petunia axillaris HOM05D002468 ORTHO05D009172 1.9e-31 140.6 156 48.1
PGR119G1456 Punica granatum HOM05D002468 ORTHO05D009172 1.9e-31 140.6 156 49.4
CBR_g38077 Chara braunii HOM05D002468 ORTHO05D009172 2.5e-31 140.2 160 48.1
ClCG07G011930 Citrullus lanatus HOM05D002468 ORTHO05D009172 2.5e-31 140.2 157 47.8
DCAR_026442 Daucus carota HOM05D002468 ORTHO05D009172 2.5e-31 140.2 156 50.6
Lj6A840G36 Lonicera japonica HOM05D002468 ORTHO05D009172 2.5e-31 140.2 156 48.1
Os07g0133700 Oryza sativa ssp. japonica HOM05D002468 ORTHO05D009172 2.5e-31 140.2 156 47.4
Actinidia30582 Actinidia chinensis HOM05D002468 ORTHO05D009172 3.3e-31 139.8 156 47.4
ATR0582G095 Amborella trichopoda HOM05D002468 ORTHO05D009172 3.3e-31 139.8 156 48.1
Lj1g0015804 Lotus japonicus HOM05D002468 ORTHO05D009172 3.3e-31 139.8 243 40.3
Sc11g0000070 Simmondsia chinensis HOM05D002468 ORTHO05D009172 3.3e-31 139.8 156 48.7
Aqoxy5G03073 Aquilegia oxysepala HOM05D002468 ORTHO05D009172 4.3e-31 139.4 156 48.7
EL10Ac7g17009 Beta vulgaris HOM05D002468 ORTHO05D009172 4.3e-31 139.4 156 48.1
Sabra01G0047500 Salix brachista HOM05D002468 ORTHO05D009172 5.7e-31 139.0 156 48.7
TAR622G1298 Trochodendron aralioides HOM05D002468 ORTHO05D009172 5.7e-31 139.0 156 48.7
Sp6g30610 Schrenkiella parvula HOM05D002468 ORTHO05D009172 7.4e-31 138.7 156 47.4
GSVIVG01001099001 Vitis vinifera HOM05D002468 ORTHO05D009172 7.4e-31 138.7 156 47.4
Aa31LG3G14280 Aethionema arabicum HOM05D002468 ORTHO05D009172 9.6e-31 138.3 163 47.2
Nitab4.5_0002569g0030 Nicotiana tabacum HOM05D002468 ORTHO05D009172 9.6e-31 138.3 228 41.2
Solyc11g033284.1 Solanum lycopersicum HOM05D002468 ORTHO05D009172 9.6e-31 138.3 231 39.8
AagrBONN_evm.TU.Sc2ySwM_344.1577 Anthoceros agrestis HOM05D002468 ORTHO05D009172 1.3e-30 137.9 275 39.3
Atru.chr12.1429 Acer truncatum HOM05D002468 ORTHO05D009172 1.6e-30 137.5 156 48.1
Hma1.2p1_1436F.1_g283230 Hydrangea macrophylla HOM05D002468 ORTHO05D009172 1.6e-30 137.5 156 50.0
Medtr7g006570 Medicago truncatula HOM05D002468 ORTHO05D009172 1.6e-30 137.5 243 41.6
Nitab4.5_0004349g0030 Nicotiana tabacum HOM05D002468 ORTHO05D009172 1.6e-30 137.5 230 40.4
TWI36G1656 Tripterygium wilfordii HOM05D002468 ORTHO05D009172 1.6e-30 137.5 231 39.4
HPP92_024421 Vanilla planifolia HOM05D002468 ORTHO05D009172 1.6e-30 137.5 156 48.1
A02p01900 Brassica napus HOM05D002468 ORTHO05D009172 2.1e-30 137.1 156 46.8
BraA02t05163Z Brassica rapa HOM05D002468 ORTHO05D009172 2.1e-30 137.1 156 46.8
Thhalv10014743m.g Eutrema salsugineum HOM05D002468 ORTHO05D009172 2.1e-30 137.1 156 46.8
AUR62041001 Chenopodium quinoa HOM05D002468 ORTHO05D009172 2.8e-30 136.7 227 39.2
CANSAT80G1997 Cannabis sativa HOM05D002468 ORTHO05D009172 3.7e-30 136.3 231 39.0
MELO3C017816.2 Cucumis melo HOM05D002468 ORTHO05D009172 3.7e-30 136.3 157 48.4
Mapoly0061s0100 Marchantia polymorpha HOM05D002468 ORTHO05D009172 3.7e-30 136.3 156 48.1
Pp3c16_12110 Physcomitrium patens HOM05D002468 ORTHO05D009172 3.7e-30 136.3 227 40.5
Sopen11g017130 Solanum pennellii HOM05D002468 ORTHO05D009172 3.7e-30 136.3 229 39.7
Cc11_g14950 Coffea canephora HOM05D002468 ORTHO05D009172 6.2e-30 135.6 226 39.8
CsaV3_4G002230 Cucumis sativus L. HOM05D002468 ORTHO05D009172 8.2e-30 135.2 156 48.1
SEGI_23050 Sequoiadendron giganteum HOM05D002468 ORTHO05D009172 8.2e-30 135.2 156 47.4
Oeu010258.1 Olea europaea HOM05D002468 ORTHO05D009172 1.1e-29 134.8 166 45.2
PSO017G2800 Papaver somniferum HOM05D002468 ORTHO05D009172 1.4e-29 134.4 156 46.2
TPR.G9727 Trifolium pratense HOM05D002468 ORTHO05D009172 1.8e-29 134.0 248 40.7
ECA246G0169 Erigeron canadensis HOM05D002468 ORTHO05D005371 2.4e-29 133.7 156 47.4
Lalb_Chr04g0257311 Lupinus albus HOM05D002468 ORTHO05D009172 3.1e-29 133.3 228 40.4
Lsat_1_v5_gn_3_32621 Lactuca sativa HOM05D002468 ORTHO05D009172 4.0e-29 132.9 149 50.3
PGSC0003DMG401028027 Solanum tuberosum HOM05D002468 ORTHO05D009172 4.0e-29 132.9 229 39.3
Aqoxy5G03072 Aquilegia oxysepala HOM05D002468 ORTHO05D009172 5.3e-29 132.5 156 46.2
Cre12.g534700 Chlamydomonas reinhardtii HOM05D002468 ORTHO05D009172 5.3e-29 132.5 212 43.4
Pp3c5_13790 Physcomitrium patens HOM05D002468 ORTHO05D009172 9.0e-29 131.7 235 40.9
TWI75G1838 Tripterygium wilfordii HOM05D002468 ORTHO05D009172 9.0e-29 131.7 232 40.5
CAN.G624.2 Capsicum annuum HOM05D002468 ORTHO05D009172 2.0e-28 130.6 258 37.6
BcaNung01157 Brassica carinata HOM05D002468 ORTHO05D009172 1.3e-27 127.9 246 37.8
C02p06120 Brassica napus HOM05D002468 ORTHO05D009172 2.9e-27 126.7 158 44.3
BolC2t06553H Brassica oleracea HOM05D002468 ORTHO05D009172 2.9e-27 126.7 158 44.3
SMO137G0309 Selaginella moellendorffii HOM05D002468 ORTHO05D009172 1.1e-26 124.8 156 44.2
THA.LOC104816706 Tarenaya hassleriana HOM05D002468 ORTHO05D009172 4.3e-23 112.8 127 50.4
SGA_v2.0_scaffold258G45770 Striga asiatica HOM05D002468 ORTHO05D009172 3.7e-22 109.8 161 41.0
Prupe.1G214100 Prunus persica HOM05D002468 ORTHO05D009172 3.8e-19 99.8 94 53.2
Nn4g22124 Nelumbo nucifera HOM05D002468 ORTHO05D009172 5.0e-19 99.4 94 53.2
QL03p049029 Quercus lobata HOM05D002468 ORTHO05D009172 8.5e-19 98.6 102 51.0
MCO11G048 Micromonas commoda HOM05D002468 ORTHO05D009172 1.4e-18 97.8 256 33.2
Ca_07032_v3 Cicer arietinum L. HOM05D002468 ORTHO05D009172 1.9e-18 97.4 94 52.1
CiPaw.05G100600 Carya illinoinensis HOM05D002468 ORTHO05D009172 7.2e-18 95.5 96 50.0
Gohir.A04G101800 Gossypium hirsutum HOM05D002468 ORTHO05D009172 7.9e-17 92.0 155 37.4
Dinv17538 Davidia involucrata HOM05D002468 ORTHO05D009172 1.0e-16 91.7 178 38.8
CSS0032033 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 1.5e-15 87.8 176 38.6
MBI11_g34559_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D009172 5.3e-13 79.3 86 45.3
Ah.06g186900 Amaranthus hybridus HOM05D002468 ORTHO05D009172 1.5e-12 77.8 81 51.9
Ah.06g186920 Amaranthus hybridus HOM05D002468 ORTHO05D009172 5.9e-12 75.9 79 46.8
arahy.Tifrunner.gnm1.ann1.PEQR69 Arachis hypogaea HOM05D002468 ORTHO05D009172 8.5e-11 72.0 196 29.6
arahy.Tifrunner.gnm1.ann1.QPD63Z Arachis hypogaea HOM05D002468 ORTHO05D009172 8.5e-11 72.0 196 29.6
Glyma.02G090600 Glycine max HOM05D002468 ORTHO05D009172 5.5e-10 69.3 152 33.6
Psat3g206960 Pisum sativum HOM05D002468 ORTHO05D009172 7.2e-10 68.9 158 36.1
Cre02.g095122 Chlamydomonas reinhardtii HOM05D002468 ORTHO05D009172 9.4e-10 68.6 201 34.3
MD13G1131500 Malus domestica HOM05D002468 ORTHO05D009172 2.7e-09 67.0 157 34.4


User provided reference genes

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