Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 9.2e-204 713.4 371 100.0
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 1.4e-21 108.2 201 35.8
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 6.3e-19 99.4 202 36.1
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 1.8e-18 97.8 210 33.3
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 1.8e-18 97.8 167 41.3
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 2.4e-18 97.4 212 33.0
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 1.2e-17 95.1 212 32.5
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 1.2e-17 95.1 204 33.3
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.6e-17 94.0 142 38.0
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 3.4e-17 93.6 202 33.7
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 3.4e-17 93.6 202 33.2
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 3.4e-17 93.6 202 32.7
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 4.5e-17 93.2 125 38.4
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 5.9e-17 92.8 201 32.8
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 5.9e-17 92.8 201 33.8
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 5.9e-17 92.8 203 33.5
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 1.0e-16 92.0 201 32.3
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 1.0e-16 92.0 140 38.6
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 1.0e-16 92.0 170 35.3
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 1.0e-16 92.0 200 33.0
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 1.0e-16 92.0 204 33.3
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 1.3e-16 91.7 214 31.3
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 1.7e-16 91.3 202 33.2
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 2.2e-16 90.9 202 33.2
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 2.2e-16 90.9 131 41.2
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 2.9e-16 90.5 201 32.3
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 3.8e-16 90.1 128 37.5
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 5.0e-16 89.7 130 38.5
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 5.0e-16 89.7 142 36.6
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 6.5e-16 89.4 201 32.8
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 8.5e-16 89.0 204 32.4
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 8.5e-16 89.0 126 41.3
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 8.5e-16 89.0 198 32.8
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 8.5e-16 89.0 201 31.8
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 1.1e-15 88.6 130 38.5
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 1.1e-15 88.6 148 36.5
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 1.1e-15 88.6 125 38.4
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.4e-15 88.2 150 38.0
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.4e-15 88.2 235 31.1
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 1.4e-15 88.2 129 38.8
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 1.9e-15 87.8 210 31.0
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 1.9e-15 87.8 212 31.1
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.5e-15 87.4 127 37.8
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 2.5e-15 87.4 128 37.5
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 3.2e-15 87.0 230 31.3
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 3.2e-15 87.0 198 32.3
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 3.2e-15 87.0 130 37.7
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 3.2e-15 87.0 212 31.6
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 3.2e-15 87.0 129 38.8
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 3.2e-15 87.0 132 37.1
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 4.2e-15 86.7 153 38.6
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 4.2e-15 86.7 125 38.4
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 4.2e-15 86.7 198 32.8
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 4.2e-15 86.7 128 39.1
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 4.2e-15 86.7 203 30.5
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 4.2e-15 86.7 197 32.5
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 5.5e-15 86.3 128 39.8
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 5.5e-15 86.3 130 38.5
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 5.5e-15 86.3 203 32.0
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 7.2e-15 85.9 142 35.9
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 9.4e-15 85.5 159 35.8
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 1.2e-14 85.1 217 30.9
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 1.6e-14 84.7 202 32.2
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 2.1e-14 84.3 215 31.2
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.1e-14 84.3 128 36.7
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.1e-14 84.3 142 34.5
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 2.1e-14 84.3 202 31.2
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 2.7e-14 84.0 199 33.2
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 3.6e-14 83.6 198 31.3
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 3.6e-14 83.6 244 29.5
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 3.6e-14 83.6 204 31.9
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 3.6e-14 83.6 202 31.2
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 3.6e-14 83.6 179 35.2
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 3.6e-14 83.6 215 29.3
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 3.6e-14 83.6 207 31.4
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 3.6e-14 83.6 203 31.0
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 4.7e-14 83.2 129 38.8
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 6.1e-14 82.8 161 34.8
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 7.9e-14 82.4 127 36.2
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 7.9e-14 82.4 130 38.5
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 1.8e-13 81.3 205 31.2
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 3.0e-13 80.5 142 33.1
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 3.9e-13 80.1 203 30.5
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 5.2e-13 79.7 135 34.1
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 5.2e-13 79.7 221 31.2
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 6.7e-13 79.3 203 32.5
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 6.7e-13 79.3 207 30.4
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 6.7e-13 79.3 207 30.4
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 6.7e-13 79.3 182 33.5
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 1.5e-12 78.2 207 30.0
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 2.0e-12 77.8 203 31.5
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 2.0e-12 77.8 166 32.5
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 3.3e-12 77.0 135 31.9
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 4.4e-12 76.6 132 37.1
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 7.4e-12 75.9 112 40.2
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 1.7e-11 74.7 218 28.4
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 2.2e-11 74.3 201 30.3
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 3.7e-11 73.6 201 30.3
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 8.2e-11 72.4 169 35.5
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 1.4e-10 71.6 204 30.4
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 4.1e-10 70.1 144 32.6
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 5.9e-09 66.2 79 44.3
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 2.2e-08 64.3 96 35.4
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 2.9e-08 63.9 199 29.1
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 5.0e-08 63.2 80 40.0
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 5.5e-07 59.7 187 33.7
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.6e-06 58.2 116 31.9


User provided reference genes

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