Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G664 Micromonas commoda HOM05D014937 ORTHO05D016224 5.7e-231 803.9 410 100.0
Cre02.g112600 Chlamydomonas reinhardtii HOM05D014937 ORTHO05D016224 7.1e-40 169.1 431 31.6
Cre11.g467541 Chlamydomonas reinhardtii HOM05D014937 ORTHO05D016224 1.9e-24 117.9 289 30.4
PRCOL_00005374 Prasinoderma coloniale HOM05D014937 ORTHO05D016224 2.1e-23 114.4 305 30.2
MCO15G016 Micromonas commoda HOM05D014937 ORTHO05D016224 7.9e-23 112.5 414 26.8
PRCOL_00005477 Prasinoderma coloniale HOM05D000059 ORTHO05D016224 5.9e-18 96.3 284 29.9
Cre12.g528000 Chlamydomonas reinhardtii HOM05D014937 ORTHO05D016224 6.1e-15 86.3 183 30.6
MCO11G012 Micromonas commoda HOM05D014937 ORTHO05D016224 7.9e-15 85.9 222 29.7
CsaV3_1G000600 Cucumis sativus L. HOM05D001741 ORTHO05D002196 1.8e-11 74.7 371 23.5
MCO11G100 Micromonas commoda HOM05D014937 ORTHO05D016224 2.4e-11 74.3 197 32.0
MELO3C026210.2 Cucumis melo HOM05D001741 ORTHO05D002196 5.3e-11 73.2 369 22.8
ClCG06G017850 Citrullus lanatus HOM05D001741 ORTHO05D002196 1.2e-10 72.0 400 22.8
MCO02G076 Micromonas commoda HOM05D014937 ORTHO05D016224 3.5e-10 70.5 257 24.9
MELO3C010151.2 Cucumis melo HOM05D001741 ORTHO05D002196 1.7e-09 68.2 371 22.9
Mapoly0027s0183 Marchantia polymorpha HOM05D001741 ORTHO05D002196 3.8e-09 67.0 191 29.8
MCO12G061 Micromonas commoda HOM05D014937 ORTHO05D016224 5.5e-08 63.2 130 34.6
VMungo1215G0164 Vigna mungo HOM05D001741 ORTHO05D002196 5.5e-08 63.2 370 22.4
HanXRQChr08g0236781 Helianthus annuus HOM05D001741 ORTHO05D002196 2.1e-07 61.2 189 25.4
Atru.chr9.1046 Acer truncatum HOM05D001741 ORTHO05D002196 3.6e-07 60.5 374 21.4
Glyma.05G047700 Glycine max HOM05D001741 ORTHO05D002196 3.6e-07 60.5 195 26.2
ECA232G3143 Erigeron canadensis HOM05D001741 ORTHO05D002196 6.1e-07 59.7 159 28.3
Glyma.17G129600 Glycine max HOM05D001741 ORTHO05D002196 1.0e-06 58.9 195 25.6
Lsat_1_v5_gn_3_51321 Lactuca sativa HOM05D001741 ORTHO05D002196 1.0e-06 58.9 156 25.0
AUR62028824 Chenopodium quinoa HOM05D001741 ORTHO05D002196 1.4e-06 58.5 156 26.9
Rhsim12G0130600 Rhododendron simsii HOM05D001741 ORTHO05D002196 1.4e-06 58.5 157 24.8
Actinidia25580 Actinidia chinensis HOM05D001741 ORTHO05D002196 1.8e-06 58.2 159 25.8
Aqoxy5G03395 Aquilegia oxysepala HOM05D001741 ORTHO05D002196 1.8e-06 58.2 193 26.4
Aqoxy7G00969 Aquilegia oxysepala HOM05D001741 ORTHO05D002196 1.8e-06 58.2 193 26.4
arahy.Tifrunner.gnm1.ann1.5BLU0Q Arachis hypogaea HOM05D001741 ORTHO05D002196 1.8e-06 58.2 166 25.9
arahy.Tifrunner.gnm1.ann1.H9YH0C Arachis hypogaea HOM05D001741 ORTHO05D002196 1.8e-06 58.2 160 26.2
AUR62005737 Chenopodium quinoa HOM05D001741 ORTHO05D002196 1.8e-06 58.2 156 26.9
MD14G1157900 Malus domestica HOM05D001741 ORTHO05D002196 1.8e-06 58.2 227 24.7
Actinidia33101 Actinidia chinensis HOM05D001741 ORTHO05D002196 2.3e-06 57.8 159 26.4
ECA246G2326 Erigeron canadensis HOM05D001741 ORTHO05D002196 2.3e-06 57.8 158 25.3
Migut.E00110 Erythranthe guttata HOM05D001741 ORTHO05D002196 2.3e-06 57.8 160 28.1
SGA_v2.0_scaffold63G21667 Striga asiatica HOM05D001741 ORTHO05D002196 2.3e-06 57.8 156 28.2
CANSAT80G0140 Cannabis sativa HOM05D001741 ORTHO05D002196 3.0e-06 57.4 227 23.8
CANSAT80G1307 Cannabis sativa HOM05D001741 ORTHO05D002196 3.0e-06 57.4 227 23.8
Cpa.g.sc13.126 Carica papaya HOM05D001741 ORTHO05D002196 3.0e-06 57.4 160 26.2
HanXRQChr09g0273111 Helianthus annuus HOM05D001741 ORTHO05D002196 3.0e-06 57.4 159 26.4
HanXRQChr17g0544801 Helianthus annuus HOM05D001741 ORTHO05D002196 3.0e-06 57.4 156 25.6
Sed0021117 Sechium edule HOM05D001741 ORTHO05D002196 3.0e-06 57.4 227 23.3
CDE05G1334 Ceratophyllum demersum HOM05D001741 ORTHO05D002196 4.0e-06 57.0 193 26.4
Sed0025327 Sechium edule HOM05D001741 ORTHO05D002196 5.2e-06 56.6 372 21.0
Eucgr.G02534 Eucalyptus grandis HOM05D001741 ORTHO05D002196 6.7e-06 56.2 161 24.8
Pp3c16_13330 Physcomitrium patens HOM05D001741 ORTHO05D002196 6.7e-06 56.2 191 26.2
Sed0012798 Sechium edule HOM05D005464 ORTHO05D006803 6.7e-06 56.2 211 23.7
ECA246G1643 Erigeron canadensis HOM05D001741 ORTHO05D002196 8.8e-06 55.8 156 25.0


User provided reference genes

Program Settings