Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G662 Micromonas commoda HOM05D005552 ORTHO05D006743 0.0e+00 1374.8 732 100.0
Mapoly0024s0139 Marchantia polymorpha HOM05D005552 ORTHO05D006743 1.8e-41 175.3 464 29.3
Pp3c2_14950 Physcomitrium patens HOM05D005552 ORTHO05D006743 1.0e-36 159.5 510 27.8
Lalb_Chr05g0213171 Lupinus albus HOM05D005552 ORTHO05D006743 1.9e-35 155.2 459 26.8
SMO358G0218 Selaginella moellendorffii HOM05D005552 ORTHO05D006743 1.9e-35 155.2 461 28.9
Hund16313 Selenicereus undatus HOM05D005552 ORTHO05D006743 8.0e-34 149.8 457 27.4
AUR62001963 Chenopodium quinoa HOM05D005552 ORTHO05D006743 1.4e-33 149.1 508 26.0
AUR62003843 Chenopodium quinoa HOM05D005552 ORTHO05D006743 1.4e-33 149.1 511 26.2
Eucgr.I00976 Eucalyptus grandis HOM05D005552 ORTHO05D006743 3.0e-33 147.9 743 24.0
Solyc01g100190.4 Solanum lycopersicum HOM05D005552 ORTHO05D006743 3.0e-33 147.9 468 25.2
ECA232G0422 Erigeron canadensis HOM05D005552 ORTHO05D006743 5.2e-33 147.1 475 25.9
Sopen01g043680 Solanum pennellii HOM05D005552 ORTHO05D006743 8.8e-33 146.4 464 25.2
PGR119G0642 Punica granatum HOM05D005552 ORTHO05D006743 2.0e-32 145.2 465 26.0
Oeu020899.1 Olea europaea HOM05D005552 ORTHO05D006743 3.4e-32 144.4 560 23.6
Duzib264G1173 Durio zibethinus HOM05D005552 ORTHO05D006743 4.4e-32 144.1 457 26.5
PGSC0003DMG400024733 Solanum tuberosum HOM05D005552 ORTHO05D006743 5.7e-32 143.7 464 25.0
Dinv39890 Davidia involucrata HOM05D005552 ORTHO05D006743 9.8e-32 142.9 463 25.9
MD02G1166800 Malus domestica HOM05D005552 ORTHO05D006743 9.8e-32 142.9 488 26.2
Sc16g0001610 Simmondsia chinensis HOM05D005552 ORTHO05D006743 1.3e-31 142.5 459 25.7
TWI09G0520 Tripterygium wilfordii HOM05D005552 ORTHO05D006743 1.3e-31 142.5 468 25.4
Aa31LG6G13810 Aethionema arabicum HOM05D005552 ORTHO05D006743 3.7e-31 141.0 459 26.6
Cre01.g043700 Chlamydomonas reinhardtii HOM05D005552 ORTHO05D006743 3.7e-31 141.0 833 25.8
Ca_24792_v3 Cicer arietinum L. HOM05D005552 ORTHO05D006743 3.7e-31 141.0 463 26.1
FvH4_1g15480 Fragaria vesca HOM05D005552 ORTHO05D006743 3.7e-31 141.0 489 25.2
FAN28G0665 Fragaria x ananassa HOM05D005552 ORTHO05D006743 4.9e-31 140.6 489 24.5
MD15G1279300 Malus domestica HOM05D005552 ORTHO05D006743 4.9e-31 140.6 459 26.8
RcHm_v2.0_Chr2g0104711 Rosa chinensis HOM05D005552 ORTHO05D006743 4.9e-31 140.6 460 25.0
CAN.G1273.15 Capsicum annuum HOM05D005552 ORTHO05D006743 6.3e-31 140.2 509 24.4
AL7G13990 Arabidopsis lyrata HOM05D005552 ORTHO05D006743 1.1e-30 139.4 459 24.4
AT4G37190 Arabidopsis thaliana HOM05D005552 ORTHO05D006743 1.4e-30 139.0 459 24.4
FAN26G2590 Fragaria x ananassa HOM05D005552 ORTHO05D006743 1.4e-30 139.0 489 24.3
Actinidia12065 Actinidia chinensis HOM05D005552 ORTHO05D006743 2.4e-30 138.3 480 24.8
CANSAT64G0631 Cannabis sativa HOM05D005552 ORTHO05D006743 3.1e-30 137.9 465 25.4
Carub.0007s0338 Capsella rubella HOM05D005552 ORTHO05D006743 3.1e-30 137.9 461 24.7
Cc02_g34610 Coffea canephora HOM05D005552 ORTHO05D006743 3.1e-30 137.9 466 26.2
THA.LOC104807572 Tarenaya hassleriana HOM05D005552 ORTHO05D006743 3.1e-30 137.9 459 25.1
Cpa.g.sc6.396 Carica papaya HOM05D005552 ORTHO05D006743 4.1e-30 137.5 459 25.3
Prupe.7G138000 Prunus persica HOM05D005552 ORTHO05D006743 5.4e-30 137.1 489 26.0
CSS0032711 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 7.0e-30 136.7 461 24.5
COL.COLO4_11363 Corchorus olitorius HOM05D005552 ORTHO05D006743 7.0e-30 136.7 460 25.0
Potri.001G361900 Populus trichocarpa HOM05D005552 ORTHO05D006743 7.0e-30 136.7 462 25.1
FAN19G0212 Fragaria x ananassa HOM05D005552 ORTHO05D006743 9.2e-30 136.3 489 23.9
GSVIVG01003549001 Vitis vinifera HOM05D005552 ORTHO05D006743 1.2e-29 136.0 464 25.0
HanXRQChr14g0430701 Helianthus annuus HOM05D005552 ORTHO05D006743 1.6e-29 135.6 469 25.6
Thecc.01G050800 Theobroma cacao HOM05D005552 ORTHO05D006743 1.6e-29 135.6 740 23.6
TAR628G0695 Trochodendron aralioides HOM05D005552 ORTHO05D006743 1.6e-29 135.6 464 24.8
Glyma.11G058500 Glycine max HOM05D005552 ORTHO05D006743 2.0e-29 135.2 460 25.4
CiPaw.01G023200 Carya illinoinensis HOM05D005552 ORTHO05D006743 2.7e-29 134.8 739 23.7
Atru.chr3.424 Acer truncatum HOM05D005552 ORTHO05D006743 3.5e-29 134.4 379 26.9
Sed0018600 Sechium edule HOM05D005552 ORTHO05D006743 3.5e-29 134.4 459 24.8
Cfa003976 Carpinus fangiana HOM05D005552 ORTHO05D006743 5.9e-29 133.7 465 26.7
CARHR245320 Cardamine hirsuta HOM05D005552 ORTHO05D006743 7.7e-29 133.3 459 24.6
Os03g0240900 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 7.7e-29 133.3 746 22.4
QL06p042750 Quercus lobata HOM05D005552 ORTHO05D006743 7.7e-29 133.3 459 26.1
vmacro21371 Vaccinium macrocarpon HOM05D005552 ORTHO05D006743 7.7e-29 133.3 749 23.1
ClCG01G016650 Citrullus lanatus HOM05D005552 ORTHO05D006743 1.0e-28 132.9 464 25.6
Gohir.A11G189700 Gossypium hirsutum HOM05D005552 ORTHO05D006743 1.0e-28 132.9 463 24.8
Lsat_1_v5_gn_4_168700 Lactuca sativa HOM05D005552 ORTHO05D006743 1.0e-28 132.9 467 23.8
VMungo1215G1500 Vigna mungo HOM05D005552 ORTHO05D006743 1.7e-28 132.1 459 25.1
Lj4C139G4 Lonicera japonica HOM05D005552 ORTHO05D006743 2.3e-28 131.7 491 24.8
Psat2g165040 Pisum sativum HOM05D005552 ORTHO05D006743 3.8e-28 131.0 459 25.3
Gohir.D11G196500 Gossypium hirsutum HOM05D005552 ORTHO05D006743 5.0e-28 130.6 461 23.9
Gorai.007G210400 Gossypium raimondii HOM05D005552 ORTHO05D006743 5.0e-28 130.6 461 23.9
Aqoxy6G00889 Aquilegia oxysepala HOM05D005552 ORTHO05D006743 6.6e-28 130.2 488 24.8
Lj2g0010083 Lotus japonicus HOM05D005552 ORTHO05D006743 1.1e-27 129.4 462 24.0
PSO675G7200 Papaver somniferum HOM05D005552 ORTHO05D006743 1.1e-27 129.4 460 24.6
Ciclev10025258m.g Citrus clementina HOM05D005552 ORTHO05D006743 1.9e-27 128.6 466 25.3
Sp7g34600 Schrenkiella parvula HOM05D005552 ORTHO05D006743 1.9e-27 128.6 459 24.2
TPR.G11337 Trifolium pratense HOM05D005552 ORTHO05D006743 2.5e-27 128.3 459 24.2
HPP92_017765 Vanilla planifolia HOM05D005552 ORTHO05D006743 2.5e-27 128.3 467 25.3
PSO541G0461 Papaver somniferum HOM05D005552 ORTHO05D006743 3.3e-27 127.9 460 24.6
Rhsim01G0119100 Rhododendron simsii HOM05D005552 ORTHO05D006743 5.6e-27 127.1 459 24.2
SGA_v2.0_scaffold36G14364 Striga asiatica HOM05D005552 ORTHO05D006743 5.6e-27 127.1 759 23.3
Medtr5g017970 Medicago truncatula HOM05D005552 ORTHO05D006743 7.3e-27 126.7 459 24.2
C07p62120 Brassica napus HOM05D005552 ORTHO05D006743 9.5e-27 126.3 463 23.8
BolC7t46629H Brassica oleracea HOM05D005552 ORTHO05D006743 9.5e-27 126.3 463 23.8
SEGI_18564 Sequoiadendron giganteum HOM05D005552 ORTHO05D006743 9.5e-27 126.3 402 26.1
Nn6g32078 Nelumbo nucifera HOM05D005552 ORTHO05D006743 1.2e-26 125.9 466 24.2
MELO3C007542.2 Cucumis melo HOM05D005552 ORTHO05D006743 1.6e-26 125.6 464 25.6
BcaNung04273 Brassica carinata HOM05D005552 ORTHO05D006743 2.1e-26 125.2 460 23.7
CBR_g38209 Chara braunii HOM05D005552 ORTHO05D006743 2.1e-26 125.2 498 27.5
Lj6g0016933 Lotus japonicus HOM05D005552 ORTHO05D006743 2.1e-26 125.2 460 24.6
HanXRQChr04g0119851 Helianthus annuus HOM05D005552 ORTHO05D006743 3.6e-26 124.4 415 24.8
A03p64710 Brassica napus HOM05D005552 ORTHO05D006743 4.7e-26 124.0 460 23.3
BraA03t15535Z Brassica rapa HOM05D005552 ORTHO05D006743 4.7e-26 124.0 460 23.3
Thhalv10024834m.g Eutrema salsugineum HOM05D005552 ORTHO05D006743 6.1e-26 123.6 399 25.1
Glyma.01G183800 Glycine max HOM05D005552 ORTHO05D006743 6.1e-26 123.6 479 24.0
ATR0767G265 Amborella trichopoda HOM05D005552 ORTHO05D006743 2.3e-25 121.7 405 25.4
MSTRG.5133 Avicennia marina HOM05D005552 ORTHO05D006743 1.2e-24 119.4 746 23.7
arahy.Tifrunner.gnm1.ann1.21BGDZ Arachis hypogaea HOM05D005552 ORTHO05D006743 4.4e-24 117.5 461 24.3
Zm00001eb030410 Zea mays HOM05D005552 ORTHO05D006743 7.5e-24 116.7 559 22.5
Haze_15444 Corylus avellana HOM05D005552 ORTHO05D006743 1.3e-23 115.9 459 24.8
Nitab4.5_0002715g0120 Nicotiana tabacum HOM05D005552 ORTHO05D006743 2.2e-23 115.2 727 23.1
Manes.16G089500 Manihot esculenta HOM05D005552 ORTHO05D006743 1.4e-22 112.5 193 33.2
CDE04G2042 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 7.0e-22 110.2 407 25.1
Hma1.2p1_0873F.1_g231290 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 2.7e-21 108.2 213 31.5
Sopen01g043710 Solanum pennellii HOM05D005552 ORTHO05D006743 3.5e-21 107.8 197 31.5
Hma1.2p1_0873F.1_g231280 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 1.0e-20 106.3 278 28.8
CDE06G0261 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 1.7e-20 105.5 215 30.2
Phvul.002G021300 Phaseolus vulgaris HOM05D005552 ORTHO05D006743 3.0e-20 104.8 185 33.5
CsaV3_6G043060 Cucumis sativus L. HOM05D005552 ORTHO05D006743 6.6e-20 103.6 197 31.0
Peaxi162Scf00073g00015 Petunia axillaris HOM05D005552 ORTHO05D006743 1.9e-19 102.1 197 31.0
DCAR_010923 Daucus carota HOM05D005552 ORTHO05D006743 7.3e-19 100.1 445 23.4
Os12g0586400 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 2.8e-18 98.2 411 24.1
BcaNung03946 Brassica carinata HOM05D005552 ORTHO05D006743 4.7e-18 97.4 185 29.7
Nitab4.5_0000368g0430 Nicotiana tabacum HOM05D005552 ORTHO05D006743 8.0e-18 96.7 457 25.2
arahy.Tifrunner.gnm1.ann1.A2BBUY Arachis hypogaea HOM05D005552 ORTHO05D006743 8.9e-17 93.2 185 30.3
Oeu035482.1 Olea europaea HOM05D005552 ORTHO05D006743 7.3e-11 73.6 261 23.4
TAR376G0305 Trochodendron aralioides HOM05D005552 ORTHO05D006743 1.2e-10 72.8 145 30.3
FAN08G3227 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.1e-10 72.0 172 29.1
FAN18G3771 Fragaria x ananassa HOM05D005552 ORTHO05D006743 4.7e-10 70.9 189 27.0
FvH4_5g33502 Fragaria vesca HOM05D005552 ORTHO05D006743 5.2e-09 67.4 172 27.9
Peaxi162Scf00073g00115 Petunia axillaris HOM05D005552 ORTHO05D006743 1.9e-06 58.9 107 34.6
arahy.Tifrunner.gnm1.ann1.ENA0P5 Arachis hypogaea HOM05D005552 ORTHO05D006743 5.4e-06 57.4 119 30.3
unitig_26.g9472 Utricularia gibba HOM05D005552 ORTHO05D006743 5.4e-06 57.4 99 33.3


User provided reference genes

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