Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G515 Micromonas commoda HOM05D022278 ORTHO05D025870 6.4e-199 697.2 348 100.0
PRCOL_00000990 Prasinoderma coloniale HOM05D022278 ORTHO05D025870 7.2e-17 92.4 194 34.5
MCO13G204 Micromonas commoda HOM05D022278 ORTHO05D025870 8.8e-15 85.5 285 29.8
MCO07G581 Micromonas commoda HOM05D022278 ORTHO05D025870 4.1e-12 76.6 263 30.8
PRCOL_00004058 Prasinoderma coloniale HOM05D022278 ORTHO05D025870 9.4e-09 65.5 226 27.9
Sabra15G0006100 Salix brachista HOM05D005634 ORTHO05D006926 9.4e-09 65.5 168 32.1
CSS0047779 Camellia sinensis var. sinensis HOM05D005634 ORTHO05D006926 2.1e-08 64.3 168 31.5
Potri.015G008000 Populus trichocarpa HOM05D005634 ORTHO05D006926 2.7e-08 63.9 168 32.1
SalBow4G1390 Salvia bowleyana HOM05D005634 ORTHO05D006926 8.0e-08 62.4 168 31.0
CDE11G0057 Ceratophyllum demersum HOM05D005634 ORTHO05D006926 1.0e-07 62.0 168 29.8
CDE09G0596 Ceratophyllum demersum HOM05D005634 ORTHO05D006926 1.4e-07 61.6 168 30.4
Cc02_g01130 Coffea canephora HOM05D005634 ORTHO05D006926 1.4e-07 61.6 168 31.0
Glyma.14G118100 Glycine max HOM05D005634 ORTHO05D006926 1.4e-07 61.6 164 31.1
Oeu037042.1 Olea europaea HOM05D005634 ORTHO05D006926 1.8e-07 61.2 164 31.1
Mapoly0035s0022 Marchantia polymorpha HOM05D005634 ORTHO05D006926 2.3e-07 60.8 211 28.4
Ciclev10021946m.g Citrus clementina HOM05D005634 ORTHO05D006926 3.0e-07 60.5 164 30.5
Migut.F00174 Erythranthe guttata HOM05D005634 ORTHO05D006926 3.0e-07 60.5 164 30.5
Thecc.03G204700 Theobroma cacao HOM05D005634 ORTHO05D006926 4.0e-07 60.1 168 29.8
GSVIVG01038606001 Vitis vinifera HOM05D005634 ORTHO05D006926 4.0e-07 60.1 168 30.4
QL09p007605 Quercus lobata HOM05D005634 ORTHO05D006926 5.2e-07 59.7 164 30.5
Rhsim09G0207900 Rhododendron simsii HOM05D005634 ORTHO05D006926 5.2e-07 59.7 174 29.3
Atru.chr12.2317 Acer truncatum HOM05D005634 ORTHO05D006926 6.8e-07 59.3 168 29.8
ATR0620G015 Amborella trichopoda HOM05D005634 ORTHO05D006926 8.8e-07 58.9 164 31.1
Haze_00263 Corylus avellana HOM05D005634 ORTHO05D006926 8.8e-07 58.9 164 30.5
MD01G1225500 Malus domestica HOM05D005634 ORTHO05D006926 8.8e-07 58.9 168 31.0
PGR142G2679 Punica granatum HOM05D005634 ORTHO05D006926 8.8e-07 58.9 168 29.8
arahy.Tifrunner.gnm1.ann1.P45MK1 Arachis hypogaea HOM05D005634 ORTHO05D006926 1.2e-06 58.5 176 27.3
Hund21024 Selenicereus undatus HOM05D005634 ORTHO05D006926 1.2e-06 58.5 167 29.9
SGA_v2.0_scaffold18G08443 Striga asiatica HOM05D002361 ORTHO05D006926 1.2e-06 58.5 164 29.9
arahy.Tifrunner.gnm1.ann1.WWF9U9 Arachis hypogaea HOM05D005634 ORTHO05D006926 1.5e-06 58.2 176 27.3
Duzib084G0100 Durio zibethinus HOM05D005634 ORTHO05D006926 2.0e-06 57.8 168 29.2
Nn1g00367 Nelumbo nucifera HOM05D005634 ORTHO05D006926 2.0e-06 57.8 168 29.2
CBR_g51265 Chara braunii HOM05D005634 ORTHO05D006926 2.6e-06 57.4 155 29.7
DCAR_014553 Daucus carota HOM05D005634 ORTHO05D006926 2.6e-06 57.4 164 30.5
Lalb_Chr08g0239991 Lupinus albus HOM05D005634 ORTHO05D006926 2.6e-06 57.4 176 27.3
MBI12_g30967_MAGBIO Magnolia biondii HOM05D005634 ORTHO05D006926 2.6e-06 57.4 168 30.4
Manes.01G037500 Manihot esculenta HOM05D005634 ORTHO05D006926 2.6e-06 57.4 168 29.8
COL.COLO4_16824 Corchorus olitorius HOM05D005634 ORTHO05D006926 3.4e-06 57.0 164 29.9
Actinidia18672 Actinidia chinensis HOM05D005634 ORTHO05D006926 7.5e-06 55.8 172 27.9
MSTRG.27003 Avicennia marina HOM05D005634 ORTHO05D006926 7.5e-06 55.8 243 27.6
Psat5g074680 Pisum sativum HOM05D005634 ORTHO05D006926 9.8e-06 55.5 152 27.6
vmacro10142 Vaccinium macrocarpon HOM05D005634 ORTHO05D006926 9.8e-06 55.5 168 29.8


User provided reference genes

Program Settings