Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G507 Micromonas commoda HOM05D005947 ORTHO05D007498 3.1e-131 471.9 245 100.0
Cre12.g522950 Chlamydomonas reinhardtii HOM05D005947 ORTHO05D007498 2.6e-98 362.5 240 72.9
SMO364G0223 Selaginella moellendorffii HOM05D005947 ORTHO05D007498 5.0e-73 278.5 241 63.9
Lalb_Chr01g0009481 Lupinus albus HOM05D005947 ORTHO05D007498 1.2e-71 273.9 249 60.2
Glyma.09G132300 Glycine max HOM05D005947 ORTHO05D007498 1.6e-71 273.5 249 60.6
Glyma.16G179200 Glycine max HOM05D005947 ORTHO05D007498 2.7e-71 272.7 249 60.6
Lalb_Chr03g0034831 Lupinus albus HOM05D005947 ORTHO05D007498 3.6e-71 272.3 249 59.8
COL.COLO4_10059 Corchorus olitorius HOM05D005947 ORTHO05D007498 4.7e-71 271.9 249 59.8
AagrBONN_evm.TU.Sc2ySwM_368.3402 Anthoceros agrestis HOM05D005947 ORTHO05D007498 8.0e-71 271.2 239 62.3
Hma1.2p1_0274F.1_g110170 Hydrangea macrophylla HOM05D005947 ORTHO05D007498 8.0e-71 271.2 250 60.4
Phvul.004G106800 Phaseolus vulgaris HOM05D005947 ORTHO05D007498 8.0e-71 271.2 249 59.8
arahy.Tifrunner.gnm1.ann1.D9DNDH Arachis hypogaea HOM05D005947 ORTHO05D007498 1.0e-70 270.8 239 61.9
Duzib205G0732 Durio zibethinus HOM05D005947 ORTHO05D007498 1.0e-70 270.8 238 62.6
Rhsim09G0200500 Rhododendron simsii HOM05D005947 ORTHO05D007498 2.3e-70 269.6 250 60.4
VMungo0464G0961 Vigna mungo HOM05D005947 ORTHO05D007498 2.3e-70 269.6 249 59.4
vmacro09816 Vaccinium macrocarpon HOM05D005947 ORTHO05D007498 3.0e-70 269.2 237 62.4
Mapoly0042s0122 Marchantia polymorpha HOM05D005947 ORTHO05D007498 4.0e-70 268.9 221 66.1
Psat0ss1860g0200 Pisum sativum HOM05D005947 ORTHO05D007498 4.0e-70 268.9 261 57.9
arahy.Tifrunner.gnm1.ann1.4MV0VI Arachis hypogaea HOM05D005947 ORTHO05D007498 5.2e-70 268.5 238 61.8
Ca_20085_v3 Cicer arietinum L. HOM05D005947 ORTHO05D007498 5.2e-70 268.5 255 58.4
ECA232G3749 Erigeron canadensis HOM05D005947 ORTHO05D007498 6.7e-70 268.1 250 59.6
SEGI_04763 Sequoiadendron giganteum HOM05D005947 ORTHO05D007498 6.7e-70 268.1 253 59.7
Cfa016284 Carpinus fangiana HOM05D005947 ORTHO05D007498 8.8e-70 267.7 237 62.0
Cc02_g02400 Coffea canephora HOM05D005947 ORTHO05D007498 8.8e-70 267.7 237 62.0
Haze_00040 Corylus avellana HOM05D005947 ORTHO05D007498 8.8e-70 267.7 237 62.0
Lj2g0014936 Lotus japonicus HOM05D005947 ORTHO05D007498 8.8e-70 267.7 250 59.2
Dinv28389 Davidia involucrata HOM05D005947 ORTHO05D007498 1.2e-69 267.3 237 61.6
AUR62031418 Chenopodium quinoa HOM05D005947 ORTHO05D007498 1.5e-69 266.9 238 62.6
Dinv35250 Davidia involucrata HOM05D005947 ORTHO05D007498 1.5e-69 266.9 238 61.8
Lj1P1004T65 Lonicera japonica HOM05D005947 ORTHO05D007498 1.5e-69 266.9 237 61.6
Peaxi162Scf00444g00012 Petunia axillaris HOM05D005947 ORTHO05D007498 1.5e-69 266.9 237 61.6
SalBow4G2978 Salvia bowleyana HOM05D005947 ORTHO05D007498 1.5e-69 266.9 237 61.6
Sed0018068 Sechium edule HOM05D005947 ORTHO05D007498 1.5e-69 266.9 250 58.8
PGR042G2417 Punica granatum HOM05D005947 ORTHO05D007498 2.0e-69 266.5 237 62.0
CAN.G236.6 Capsicum annuum HOM05D005947 ORTHO05D007498 2.6e-69 266.2 237 61.6
Cpa.g.sc107.105 Carica papaya HOM05D005947 ORTHO05D007498 2.6e-69 266.2 237 61.6
CiPaw.05G262900 Carya illinoinensis HOM05D005947 ORTHO05D007498 2.6e-69 266.2 237 61.6
Duzib084G0036 Durio zibethinus HOM05D005947 ORTHO05D007498 2.6e-69 266.2 237 61.6
Gohir.A08G098000 Gossypium hirsutum HOM05D005947 ORTHO05D007498 2.6e-69 266.2 237 61.6
Gohir.D08G109600 Gossypium hirsutum HOM05D005947 ORTHO05D007498 2.6e-69 266.2 237 61.6
Gorai.004G117300 Gossypium raimondii HOM05D005947 ORTHO05D007498 2.6e-69 266.2 237 61.6
Lsat_1_v5_gn_9_56500 Lactuca sativa HOM05D005947 ORTHO05D007498 2.6e-69 266.2 237 61.6
QL09p012952 Quercus lobata HOM05D005947 ORTHO05D007498 2.6e-69 266.2 237 61.6
TWI39G0764 Tripterygium wilfordii HOM05D005947 ORTHO05D007498 2.6e-69 266.2 237 62.4
Aqoxy7G00241 Aquilegia oxysepala HOM05D005947 ORTHO05D007498 3.3e-69 265.8 250 59.2
AUR62021126 Chenopodium quinoa HOM05D005947 ORTHO05D007498 3.3e-69 265.8 238 62.2
ClCG01G000930 Citrullus lanatus HOM05D005947 ORTHO05D007498 3.3e-69 265.8 246 58.5
Solyc03g007980.1 Solanum lycopersicum HOM05D005947 ORTHO05D007498 3.3e-69 265.8 238 61.8
Sopen03g003920 Solanum pennellii HOM05D005947 ORTHO05D007498 3.3e-69 265.8 238 61.8
PGSC0003DMG400010127 Solanum tuberosum HOM05D005947 ORTHO05D007498 3.3e-69 265.8 238 61.8
THA.LOC104798913 Tarenaya hassleriana HOM05D005947 ORTHO05D007498 3.3e-69 265.8 237 61.6
Migut.F00295 Erythranthe guttata HOM05D005947 ORTHO05D007498 4.4e-69 265.4 237 61.2
Eucgr.A02743 Eucalyptus grandis HOM05D005947 ORTHO05D007498 4.4e-69 265.4 237 61.2
Thecc.03G183900 Theobroma cacao HOM05D005947 ORTHO05D007498 5.7e-69 265.0 237 61.2
unitig_37.g11971 Utricularia gibba HOM05D005947 ORTHO05D007498 5.7e-69 265.0 238 61.8
Nitab4.5_0008851g0010 Nicotiana tabacum HOM05D005947 ORTHO05D007498 7.5e-69 264.6 237 60.8
TAR375G0765 Trochodendron aralioides HOM05D005947 ORTHO05D007498 7.5e-69 264.6 237 61.2
BcaNung01201 Brassica carinata HOM05D005947 ORTHO05D007498 9.7e-69 264.2 237 61.6
BcaNung01829 Brassica carinata HOM05D005947 ORTHO05D007498 9.7e-69 264.2 237 61.6
A06p34800 Brassica napus HOM05D005947 ORTHO05D007498 9.7e-69 264.2 237 61.6
C07p43700 Brassica napus HOM05D005947 ORTHO05D007498 9.7e-69 264.2 237 61.6
BolC7t44900H Brassica oleracea HOM05D005947 ORTHO05D007498 9.7e-69 264.2 237 61.6
BraA06t26407Z Brassica rapa HOM05D005947 ORTHO05D007498 9.7e-69 264.2 237 61.6
CANSAT21G1923 Cannabis sativa HOM05D005947 ORTHO05D007498 9.7e-69 264.2 237 60.8
MELO3C005838.2 Cucumis melo HOM05D005947 ORTHO05D007498 9.7e-69 264.2 238 61.3
CsaV3_5G001080 Cucumis sativus L. HOM05D005947 ORTHO05D007498 9.7e-69 264.2 238 61.3
Nitab4.5_0000084g0430 Nicotiana tabacum HOM05D005947 ORTHO05D007498 9.7e-69 264.2 237 60.8
PSO478G4027 Papaver somniferum HOM05D005947 ORTHO05D007498 9.7e-69 264.2 250 58.8
PSO782G1988 Papaver somniferum HOM05D005947 ORTHO05D007498 9.7e-69 264.2 250 58.8
Sabra04G0053200 Salix brachista HOM05D005947 ORTHO05D007498 9.7e-69 264.2 237 61.2
CSS0033085 Camellia sinensis var. sinensis HOM05D005947 ORTHO05D007498 1.3e-68 263.8 242 59.5
CDE11G0334 Ceratophyllum demersum HOM05D005947 ORTHO05D007498 1.3e-68 263.8 237 60.8
Thhalv10005713m.g Eutrema salsugineum HOM05D005947 ORTHO05D007498 1.3e-68 263.8 237 61.6
Nn6g33304 Nelumbo nucifera HOM05D005947 ORTHO05D007498 1.3e-68 263.8 237 60.8
Pp3c1_24820 Physcomitrium patens HOM05D005947 ORTHO05D007498 1.3e-68 263.8 237 61.6
Potri.004G080100 Populus trichocarpa HOM05D005947 ORTHO05D007498 1.3e-68 263.8 237 61.6
Sp2g23290 Schrenkiella parvula HOM05D005947 ORTHO05D007498 1.3e-68 263.8 237 61.6
Actinidia31839 Actinidia chinensis HOM05D005947 ORTHO05D007498 1.7e-68 263.5 229 62.9
MD07G1278700 Malus domestica HOM05D005947 ORTHO05D007498 1.7e-68 263.5 250 58.8
Pp3c2_15820 Physcomitrium patens HOM05D005947 ORTHO05D007498 1.7e-68 263.5 237 61.2
AL6G35340 Arabidopsis lyrata HOM05D005947 ORTHO05D007498 2.2e-68 263.1 237 61.2
AT5G24020 Arabidopsis thaliana HOM05D005947 ORTHO05D007498 2.2e-68 263.1 237 61.2
Carub.0006s2174 Capsella rubella HOM05D005947 ORTHO05D007498 2.2e-68 263.1 237 60.8
Medtr6g048300 Medicago truncatula HOM05D005947 ORTHO05D007498 2.2e-68 263.1 270 55.2
Nn1g01628 Nelumbo nucifera HOM05D005947 ORTHO05D007498 2.2e-68 263.1 240 59.2
SGA_v2.0_scaffold60G21105 Striga asiatica HOM05D005947 ORTHO05D007498 2.2e-68 263.1 221 64.3
TPR.G33515 Trifolium pratense HOM05D005947 ORTHO05D007498 2.2e-68 263.1 267 55.8
BcaB04g19841 Brassica carinata HOM05D005947 ORTHO05D007498 2.8e-68 262.7 237 60.8
CARHR189560 Cardamine hirsuta HOM05D005947 ORTHO05D007498 2.8e-68 262.7 237 61.2
Manes.14G022800 Manihot esculenta HOM05D005947 ORTHO05D007498 2.8e-68 262.7 238 61.8
Sed0027671 Sechium edule HOM05D005947 ORTHO05D007498 2.8e-68 262.7 237 60.8
Aa31LG11G3310 Aethionema arabicum HOM05D005947 ORTHO05D007498 3.7e-68 262.3 237 61.2
Ah.07g206580 Amaranthus hybridus HOM05D005947 ORTHO05D007498 3.7e-68 262.3 238 61.3
MSTRG.8712 Avicennia marina HOM05D005947 ORTHO05D007498 3.7e-68 262.3 237 60.3
TWI14G0750 Tripterygium wilfordii HOM05D005947 ORTHO05D007498 3.7e-68 262.3 237 61.2
MSTRG.27089 Avicennia marina HOM05D005947 ORTHO05D007498 4.8e-68 261.9 237 60.3
Prupe.2G300600 Prunus persica HOM05D005947 ORTHO05D007498 4.8e-68 261.9 237 60.8
RcHm_v2.0_Chr1g0378251 Rosa chinensis HOM05D005947 ORTHO05D007498 4.8e-68 261.9 238 61.3
THA.LOC104814930 Tarenaya hassleriana HOM05D005947 ORTHO05D007498 4.8e-68 261.9 237 60.3
ATR0661G312 Amborella trichopoda HOM05D005947 ORTHO05D007498 6.3e-68 261.5 238 59.7
CDE02G4387 Ceratophyllum demersum HOM05D005947 ORTHO05D007498 8.2e-68 261.2 237 60.8
DCAR_010659 Daucus carota HOM05D005947 ORTHO05D007498 8.2e-68 261.2 237 61.2
FvH4_7g30210 Fragaria vesca HOM05D005947 ORTHO05D007498 8.2e-68 261.2 238 60.9
FAN01G2305 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.2e-68 261.2 238 60.9
FAN03G2555 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.2e-68 261.2 238 60.9
FAN03G2880 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.2e-68 261.2 238 60.9
FAN06G1268 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.2e-68 261.2 238 60.9
FAN10G0541 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.2e-68 261.2 238 60.9
FAN10G2124 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.2e-68 261.2 238 60.9
Aa31sc89G80 Aethionema arabicum HOM05D000041 ORTHO05D000061 1.1e-67 260.8 237 60.8
Ciclev10005457m.g Citrus clementina HOM05D005947 ORTHO05D007498 1.1e-67 260.8 237 59.5
Sc19g0001250 Simmondsia chinensis HOM05D005947 ORTHO05D007498 1.1e-67 260.8 238 60.1
FAN06G0215 Fragaria x ananassa HOM05D005947 ORTHO05D007498 2.4e-67 259.6 237 60.3
Atru.chr1.362 Acer truncatum HOM05D005947 ORTHO05D007498 3.1e-67 259.2 237 59.5
MBI11_g04748_MAGBIO Magnolia biondii HOM05D005947 ORTHO05D007498 9.1e-67 257.7 238 59.2
TAR374G0782 Trochodendron aralioides HOM05D005947 ORTHO05D007498 1.6e-66 256.9 237 59.5
Zm00001eb268640 Zea mays HOM05D005947 ORTHO05D007498 8.3e-60 234.6 219 59.4
Os06g0106000 Oryza sativa ssp. japonica HOM05D005947 ORTHO05D007498 5.4e-59 231.9 237 56.1
Oeu034005.1 Olea europaea HOM05D005947 ORTHO05D007498 6.1e-47 191.8 190 58.9
Haze_27446 Corylus avellana HOM05D005947 ORTHO05D007498 1.2e-39 167.5 224 40.6
Hund04783 Selenicereus undatus HOM05D005947 ORTHO05D007498 3.8e-20 102.8 88 68.2
Cc04_g12430 Coffea canephora HOM05D005947 ORTHO05D007498 6.0e-18 95.5 70 64.3
MD15G1281600 Malus domestica HOM05D005947 ORTHO05D007498 1.7e-09 67.4 51 62.7
Pp3c14_14070 Physcomitrium patens HOM05D005947 ORTHO05D007498 1.1e-06 58.2 138 37.7


User provided reference genes

Program Settings