Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G457 Micromonas commoda HOM05D006929 ORTHO05D008646 0.0e+00 2041.9 1209 100.0
SMO201G0152 Selaginella moellendorffii HOM05D006929 ORTHO05D008646 5.4e-43 181.0 889 23.2
Glyma.02G044800 Glycine max HOM05D006929 ORTHO05D008646 1.2e-39 169.9 894 23.9
arahy.Tifrunner.gnm1.ann1.66U8DG Arachis hypogaea HOM05D006929 ORTHO05D008646 1.6e-39 169.5 897 23.9
Ca_03636_v3 Cicer arietinum L. HOM05D006929 ORTHO05D008646 3.6e-39 168.3 900 23.7
Medtr8g074970 Medicago truncatula HOM05D006929 ORTHO05D008646 1.8e-38 166.0 893 23.3
CSS0014208 Camellia sinensis var. sinensis HOM05D006929 ORTHO05D008646 4.0e-38 164.9 879 23.0
CSS0041887 Camellia sinensis var. sinensis HOM05D006929 ORTHO05D008646 4.0e-38 164.9 879 23.0
Psat4g102480 Pisum sativum HOM05D006929 ORTHO05D008646 4.0e-38 164.9 894 23.5
PGSC0003DMG400003658 Solanum tuberosum HOM05D006929 ORTHO05D008646 6.8e-38 164.1 951 23.6
Sopen02g028220 Solanum pennellii HOM05D006929 ORTHO05D008646 1.2e-37 163.3 951 23.6
Nitab4.5_0006899g0010 Nicotiana tabacum HOM05D006929 ORTHO05D008646 2.0e-37 162.5 961 23.0
TAR381G0226 Trochodendron aralioides HOM05D006929 ORTHO05D008646 2.0e-37 162.5 810 24.1
Zm00001eb402740 Zea mays HOM05D006929 ORTHO05D008646 4.4e-37 161.4 884 23.6
Cc07_g11260 Coffea canephora HOM05D006929 ORTHO05D008646 5.7e-37 161.0 896 24.2
Solyc02g083430.1 Solanum lycopersicum HOM05D006929 ORTHO05D008646 7.5e-37 160.6 951 23.4
SEGI_26365 Sequoiadendron giganteum HOM05D006929 ORTHO05D008646 9.8e-37 160.2 963 22.4
Phvul.003G266800 Phaseolus vulgaris HOM05D006929 ORTHO05D008646 2.2e-36 159.1 895 23.7
HPP92_028512 Vanilla planifolia HOM05D006929 ORTHO05D008646 2.2e-36 159.1 874 23.5
CAN.G890.36 Capsicum annuum HOM05D006929 ORTHO05D008646 3.7e-36 158.3 954 23.1
Glyma.16G122300 Glycine max HOM05D006929 ORTHO05D008646 4.9e-36 157.9 928 23.4
Manes.02G109700 Manihot esculenta HOM05D006929 ORTHO05D008646 4.9e-36 157.9 898 22.8
Peaxi162Scf00328g00022 Petunia axillaris HOM05D006929 ORTHO05D008646 4.9e-36 157.9 896 23.7
Haze_03709 Corylus avellana HOM05D006929 ORTHO05D008646 6.3e-36 157.5 940 22.9
Lj4g0000234 Lotus japonicus HOM05D006929 ORTHO05D008646 8.3e-36 157.1 898 23.6
Rhsim08G0030500 Rhododendron simsii HOM05D006929 ORTHO05D008646 2.4e-35 155.6 904 23.6
Eucgr.I02311 Eucalyptus grandis HOM05D006929 ORTHO05D008646 4.1e-35 154.8 342 30.7
MBI05_g00179_MAGBIO Magnolia biondii HOM05D006929 ORTHO05D008646 9.1e-35 153.7 815 23.3
Cpa.g.sc6.307 Carica papaya HOM05D006929 ORTHO05D008646 1.6e-34 152.9 966 22.5
Lalb_Chr09g0334271 Lupinus albus HOM05D006929 ORTHO05D008646 2.0e-34 152.5 969 23.0
Lalb_Chr16g0391511 Lupinus albus HOM05D006929 ORTHO05D008646 2.0e-34 152.5 924 23.8
Oeu032040.1 Olea europaea HOM05D006929 ORTHO05D008646 2.0e-34 152.5 899 23.2
FAN23G2594 Fragaria x ananassa HOM05D006929 ORTHO05D008646 2.7e-34 152.1 892 22.3
RcHm_v2.0_Chr2g0098461 Rosa chinensis HOM05D006929 ORTHO05D008646 2.7e-34 152.1 897 22.3
TWI53G0685 Tripterygium wilfordii HOM05D006929 ORTHO05D008646 2.7e-34 152.1 965 22.2
FAN26G2428 Fragaria x ananassa HOM05D006929 ORTHO05D008646 3.5e-34 151.8 892 22.2
Cfa007024 Carpinus fangiana HOM05D006929 ORTHO05D008646 4.5e-34 151.4 885 22.8
VMungo0251G3358 Vigna mungo HOM05D006929 ORTHO05D008646 4.5e-34 151.4 894 23.5
FvH4_1g11170 Fragaria vesca HOM05D006929 ORTHO05D008646 1.7e-33 149.4 909 22.4
Potri.005G108600 Populus trichocarpa HOM05D006929 ORTHO05D008646 1.7e-33 149.4 920 22.5
FAN28G2763 Fragaria x ananassa HOM05D006929 ORTHO05D008646 2.3e-33 149.1 892 22.1
Thecc.01G012300 Theobroma cacao HOM05D006929 ORTHO05D008646 2.3e-33 149.1 896 22.5
ATR0661G330 Amborella trichopoda HOM05D006929 ORTHO05D008646 2.9e-33 148.7 811 22.1
Os03g0137400 Oryza sativa ssp. japonica HOM05D006929 ORTHO05D008646 2.9e-33 148.7 994 22.2
MSTRG.21326 Avicennia marina HOM05D006929 ORTHO05D008646 1.1e-32 146.7 963 22.6
Lj2P484T36 Lonicera japonica HOM05D006929 ORTHO05D008646 1.1e-32 146.7 427 27.9
Sc07g0001190 Simmondsia chinensis HOM05D006929 ORTHO05D008646 1.5e-32 146.4 918 21.8
MD02G1124200 Malus domestica HOM05D006929 ORTHO05D008646 1.9e-32 146.0 929 22.2
PSO170G0764 Papaver somniferum HOM05D006929 ORTHO05D008646 1.9e-32 146.0 912 21.9
Nn6g31928 Nelumbo nucifera HOM05D006929 ORTHO05D008646 4.2e-32 144.8 352 30.1
COL.COLO4_22488 Corchorus olitorius HOM05D006929 ORTHO05D008646 5.5e-32 144.4 889 22.6
Migut.D00696 Erythranthe guttata HOM05D006929 ORTHO05D008646 9.5e-32 143.7 953 22.6
MD15G1238200 Malus domestica HOM05D006929 ORTHO05D008646 9.5e-32 143.7 897 22.3
Prupe.7G174200 Prunus persica HOM05D006929 ORTHO05D008646 9.5e-32 143.7 897 22.2
QL06p051910 Quercus lobata HOM05D006929 ORTHO05D008646 9.5e-32 143.7 882 22.2
SGA_v2.0_scaffold29G12165 Striga asiatica HOM05D006929 ORTHO05D008646 9.5e-32 143.7 974 22.3
PGR119G0759 Punica granatum HOM05D006929 ORTHO05D008646 1.2e-31 143.3 917 21.8
Duzib147G1132 Durio zibethinus HOM05D006929 ORTHO05D008646 2.1e-31 142.5 894 22.1
Atru.chr3.900 Acer truncatum HOM05D006929 ORTHO05D008646 4.7e-31 141.4 902 22.5
ClCG01G020570 Citrullus lanatus HOM05D006929 ORTHO05D008646 4.7e-31 141.4 805 22.1
CiPaw.07G062900 Carya illinoinensis HOM05D006929 ORTHO05D008646 6.1e-31 141.0 899 22.6
Sabra05G0089000 Salix brachista HOM05D006929 ORTHO05D008646 6.1e-31 141.0 900 22.4
CANSAT01G2329 Cannabis sativa HOM05D006929 ORTHO05D008646 8.0e-31 140.6 886 22.7
PSO210G4353 Papaver somniferum HOM05D006929 ORTHO05D008646 8.0e-31 140.6 875 22.9
Actinidia28729 Actinidia chinensis HOM05D006929 ORTHO05D008646 1.0e-30 140.2 736 23.2
Potri.007G063700 Populus trichocarpa HOM05D006929 ORTHO05D008646 1.0e-30 140.2 889 22.2
TWI73G0481 Tripterygium wilfordii HOM05D006929 ORTHO05D008646 1.0e-30 140.2 897 21.6
FAN19G0159 Fragaria x ananassa HOM05D006929 ORTHO05D008646 1.8e-30 139.4 438 26.7
MELO3C007939.2 Cucumis melo HOM05D006929 ORTHO05D008646 3.0e-30 138.7 887 21.4
Sp7g33650 Schrenkiella parvula HOM05D006929 ORTHO05D008646 5.2e-30 137.9 347 27.7
Duzib264G0985 Durio zibethinus HOM05D006929 ORTHO05D008646 6.8e-30 137.5 816 22.2
Thhalv10024429m.g Eutrema salsugineum HOM05D006929 ORTHO05D008646 6.8e-30 137.5 822 22.3
Gorai.007G191000 Gossypium raimondii HOM05D006929 ORTHO05D008646 1.2e-29 136.7 893 21.7
THA.LOC104819967 Tarenaya hassleriana HOM05D006929 ORTHO05D008646 1.2e-29 136.7 806 22.3
Gohir.D11G179100 Gossypium hirsutum HOM05D006929 ORTHO05D008646 1.5e-29 136.3 893 21.7
unitig_90.g27492 Utricularia gibba HOM05D006929 ORTHO05D008646 2.0e-29 136.0 743 23.7
Aqoxy5G01127 Aquilegia oxysepala HOM05D006929 ORTHO05D008646 2.6e-29 135.6 818 22.9
Ciclev10024912m.g Citrus clementina HOM05D006929 ORTHO05D008646 3.4e-29 135.2 896 22.0
CsaV3_6G047480 Cucumis sativus L. HOM05D006929 ORTHO05D008646 3.4e-29 135.2 886 21.6
THA.LOC104814667 Tarenaya hassleriana HOM05D006929 ORTHO05D008646 3.4e-29 135.2 873 21.9
A08p21630 Brassica napus HOM05D006929 ORTHO05D008646 5.7e-29 134.4 807 21.9
BraA08t34110Z Brassica rapa HOM05D006929 ORTHO05D008646 5.7e-29 134.4 807 21.9
Gohir.A11G172100 Gossypium hirsutum HOM05D006929 ORTHO05D008646 5.7e-29 134.4 893 21.5
BcaB03g12433 Brassica carinata HOM05D006929 ORTHO05D008646 7.5e-29 134.0 813 22.1
ECA238G2047 Erigeron canadensis HOM05D006929 ORTHO05D008646 7.5e-29 134.0 971 21.1
AL7G15180 Arabidopsis lyrata HOM05D006929 ORTHO05D008646 9.8e-29 133.7 895 21.9
DCAR_011578 Daucus carota HOM05D006929 ORTHO05D008646 1.3e-28 133.3 894 22.0
C03p80950 Brassica napus HOM05D006929 ORTHO05D008646 1.7e-28 132.9 807 21.9
Sed0020872 Sechium edule HOM05D006929 ORTHO05D008646 2.2e-28 132.5 805 22.1
Ah.02g129150 Amaranthus hybridus HOM05D006929 ORTHO05D008646 2.9e-28 132.1 817 22.4
BcaC01g00525 Brassica carinata HOM05D006929 ORTHO05D008646 3.7e-28 131.7 807 21.8
BolC3t20354H Brassica oleracea HOM05D006929 ORTHO05D008646 3.7e-28 131.7 807 21.8
Dinv40140 Davidia involucrata HOM05D006929 ORTHO05D008646 1.1e-27 130.2 876 21.7
Aa31LG6G12820 Aethionema arabicum HOM05D006929 ORTHO05D008646 1.8e-27 129.4 815 21.6
AUR62026416 Chenopodium quinoa HOM05D006929 ORTHO05D008646 3.2e-27 128.6 421 26.4
AT4G35870 Arabidopsis thaliana HOM05D006929 ORTHO05D008646 4.1e-27 128.3 895 21.9
CARHR244260 Cardamine hirsuta HOM05D006929 ORTHO05D008646 5.4e-27 127.9 898 21.7
CBR_g6408 Chara braunii HOM05D006929 ORTHO05D008646 5.4e-27 127.9 1149 25.2
Carub.0007s0436 Capsella rubella HOM05D006929 ORTHO05D008646 7.0e-27 127.5 891 21.7
HPP92_015017 Vanilla planifolia HOM05D006929 ORTHO05D008646 1.2e-26 126.7 308 30.8
SHI31694 Sapria himalayana HOM05D006929 ORTHO05D008646 3.9e-25 121.7 686 23.2
AUR62026231 Chenopodium quinoa HOM05D006929 ORTHO05D008646 1.5e-24 119.8 891 21.9
SMO328G0006 Selaginella moellendorffii HOM05D006929 ORTHO05D008646 3.4e-21 108.6 895 21.2
TPR.G19477 Trifolium pratense HOM05D006929 ORTHO05D008646 6.4e-20 104.4 801 20.7
FAN19G3132 Fragaria x ananassa HOM05D006929 ORTHO05D008646 2.3e-14 85.9 180 31.1
Nitab4.5_0002105g0010 Nicotiana tabacum HOM05D006929 ORTHO05D008646 3.4e-13 82.0 340 25.9
HPP92_015018 Vanilla planifolia HOM05D006929 ORTHO05D008646 7.1e-11 74.3 235 26.8
Atru.chr3.891 Acer truncatum HOM05D006929 ORTHO05D008646 9.2e-11 73.9 106 34.9


User provided reference genes

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