Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 5.1e-121 438.0 256 100.0
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 2.9e-39 166.4 194 52.6
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-26 122.9 167 46.7
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 6.9e-25 118.6 195 41.5
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 3.2e-22 109.8 152 43.4
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 5.5e-22 109.0 152 43.4
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 5.5e-22 109.0 152 43.4
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 9.3e-22 108.2 207 37.2
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 1.2e-21 107.8 152 44.1
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 1.6e-21 107.5 150 42.7
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 2.1e-21 107.1 152 42.8
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 2.1e-21 107.1 152 43.4
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 7.9e-21 105.1 197 38.1
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 7.9e-21 105.1 153 41.8
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 7.9e-21 105.1 150 41.3
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 7.9e-21 105.1 150 44.0
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 1.0e-20 104.8 152 44.1
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 1.0e-20 104.8 171 39.8
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 1.8e-20 104.0 152 41.4
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 3.9e-20 102.8 152 40.8
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 3.9e-20 102.8 197 35.0
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 3.9e-20 102.8 199 37.7
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 3.9e-20 102.8 150 42.7
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 5.1e-20 102.4 191 37.7
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 6.7e-20 102.1 150 42.7
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 8.7e-20 101.7 152 42.1
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 8.7e-20 101.7 152 40.8
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 1.1e-19 101.3 152 41.4
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 1.1e-19 101.3 196 37.2
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 1.5e-19 100.9 152 42.1
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 1.5e-19 100.9 152 41.4
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 1.9e-19 100.5 181 39.8
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 1.9e-19 100.5 206 35.4
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 2.5e-19 100.1 152 42.1
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 3.3e-19 99.8 152 40.1
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 3.3e-19 99.8 200 37.0
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 3.3e-19 99.8 150 42.0
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 3.3e-19 99.8 153 41.2
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 4.3e-19 99.4 153 42.5
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 5.7e-19 99.0 152 41.4
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 7.4e-19 98.6 159 40.9
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 1.3e-18 97.8 152 42.1
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 1.6e-18 97.4 150 39.3
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 2.2e-18 97.1 171 38.6
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 2.2e-18 97.1 152 40.8
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 3.7e-18 96.3 114 47.4
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 3.7e-18 96.3 152 38.8
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 4.8e-18 95.9 144 41.0
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 4.8e-18 95.9 152 40.1
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 4.8e-18 95.9 197 34.0
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 6.3e-18 95.5 194 35.6
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 8.2e-18 95.1 152 40.1
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 8.2e-18 95.1 150 40.0
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 1.1e-17 94.7 150 38.7
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.1e-17 94.7 152 38.8
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.1e-17 94.7 194 35.1
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 1.8e-17 94.0 152 38.2
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 1.8e-17 94.0 115 48.7
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.8e-17 94.0 182 37.4
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 2.4e-17 93.6 179 37.4
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 3.1e-17 93.2 170 36.5
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 4.1e-17 92.8 170 36.5
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 1.5e-16 90.9 215 34.4
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 2.6e-16 90.1 147 38.8
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 1.0e-15 88.2 114 45.6
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 1.0e-15 88.2 152 37.5
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 1.7e-15 87.4 151 36.4
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 1.7e-15 87.4 152 38.2
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 1.7e-15 87.4 219 32.9
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 2.2e-15 87.0 150 39.3
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 5.0e-15 85.9 170 36.5
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 6.5e-15 85.5 158 35.4
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 6.5e-15 85.5 152 37.5
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 2.5e-14 83.6 150 38.0
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 3.2e-14 83.2 152 37.5
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 5.5e-14 82.4 201 31.3
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 5.5e-14 82.4 133 39.8
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 1.6e-13 80.9 171 33.9
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 3.6e-13 79.7 114 41.2
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 4.6e-13 79.3 152 36.2
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 4.6e-13 79.3 152 35.5
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 7.9e-13 78.6 195 31.8
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 3.9e-12 76.3 144 36.1
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 2.0e-11 73.9 91 48.4
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 7.4e-11 72.0 113 39.8
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 2.6e-08 63.5 86 46.5
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 5.9e-08 62.4 83 44.6
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 3.8e-07 59.7 66 50.0
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 3.8e-07 59.7 170 30.6


User provided reference genes

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