Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G230 Micromonas commoda HOM05D005212 ORTHO05D006353 8.1e-167 590.5 333 100.0
ECA233G1697 Erigeron canadensis HOM05D005212 ORTHO05D006353 1.2e-40 171.4 250 40.8
PGR102G0858 Punica granatum HOM05D005212 ORTHO05D006353 1.5e-40 171.0 247 39.7
Ciclev10017606m.g Citrus clementina HOM05D005212 ORTHO05D006353 1.3e-39 167.9 251 37.8
Atru.chr12.1198 Acer truncatum HOM05D005212 ORTHO05D006353 1.7e-39 167.5 249 38.6
Lalb_Chr07g0187701 Lupinus albus HOM05D005212 ORTHO05D006353 1.7e-39 167.5 244 39.8
AL4G43530 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 2.9e-39 166.8 249 38.6
Carub.0004s2707 Capsella rubella HOM05D005212 ORTHO05D006353 2.9e-39 166.8 249 39.0
Sp4g26600 Schrenkiella parvula HOM05D005212 ORTHO05D006353 2.9e-39 166.8 248 39.1
BcaC02g07097 Brassica carinata HOM05D005212 ORTHO05D006353 6.4e-39 165.6 248 39.1
BolC4t28609H Brassica oleracea HOM05D000073 ORTHO05D006353 6.4e-39 165.6 248 39.1
Potri.001G461100 Populus trichocarpa HOM05D005212 ORTHO05D006353 8.4e-39 165.2 248 39.1
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 1.4e-38 164.5 243 39.9
Thhalv10001552m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.4e-38 164.5 247 39.3
HanXRQChr12g0363921 Helianthus annuus HOM05D005212 ORTHO05D006353 1.9e-38 164.1 251 40.2
AT2G44510 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 2.4e-38 163.7 249 37.8
MD16G1023100 Malus domestica HOM05D005212 ORTHO05D006353 4.2e-38 162.9 247 38.9
CiPaw.05G194300 Carya illinoinensis HOM05D005212 ORTHO05D006353 7.1e-38 162.2 247 37.2
TPR.G18569 Trifolium pratense HOM05D005212 ORTHO05D006353 9.3e-38 161.8 245 38.4
HanXRQChr08g0212231 Helianthus annuus HOM05D005212 ORTHO05D006353 1.2e-37 161.4 248 38.3
Nn3g18288 Nelumbo nucifera HOM05D005212 ORTHO05D006353 1.2e-37 161.4 251 36.7
Mapoly0006s0099 Marchantia polymorpha HOM05D005212 ORTHO05D006353 1.6e-37 161.0 251 38.2
BcaB06g29383 Brassica carinata HOM05D005212 ORTHO05D006353 2.1e-37 160.6 248 38.3
Medtr3g088850 Medicago truncatula HOM05D005212 ORTHO05D006353 2.1e-37 160.6 250 39.2
Aqoxy7G01425 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 3.5e-37 159.8 253 36.8
Eucgr.H01942 Eucalyptus grandis HOM05D005212 ORTHO05D006353 4.6e-37 159.5 248 38.7
ATR0829G227 Amborella trichopoda HOM05D005212 ORTHO05D006353 6.0e-37 159.1 254 39.0
Manes.17G080300 Manihot esculenta HOM05D005212 ORTHO05D006353 6.0e-37 159.1 249 39.4
Ciclev10028815m.g Citrus clementina HOM05D005212 ORTHO05D006353 7.8e-37 158.7 247 39.3
Medtr3g096970 Medicago truncatula HOM05D005212 ORTHO05D006353 7.8e-37 158.7 250 38.4
Prupe.8G002300 Prunus persica HOM05D005212 ORTHO05D006353 7.8e-37 158.7 251 37.8
Lj4g0012207 Lotus japonicus HOM05D005212 ORTHO05D006353 1.0e-36 158.3 248 37.1
GSVIVG01023834001 Vitis vinifera HOM05D005212 ORTHO05D006353 1.0e-36 158.3 245 40.8
FvH4_4g34100 Fragaria vesca HOM05D005212 ORTHO05D006353 1.3e-36 157.9 247 37.7
Peaxi162Scf00723g00423 Petunia axillaris HOM05D005212 ORTHO05D006353 1.3e-36 157.9 258 37.6
Prupe.1G329700 Prunus persica HOM05D005212 ORTHO05D006353 1.3e-36 157.9 251 38.6
Solyc04g007850.3 Solanum lycopersicum HOM05D005212 ORTHO05D006353 1.3e-36 157.9 248 37.1
THA.LOC104816387 Tarenaya hassleriana HOM05D005212 ORTHO05D006353 1.3e-36 157.9 248 39.1
CARHR139690 Cardamine hirsuta HOM05D005212 ORTHO05D006353 1.7e-36 157.5 248 36.7
Phvul.005G028500 Phaseolus vulgaris HOM05D005212 ORTHO05D006353 1.7e-36 157.5 248 37.1
RcHm_v2.0_Chr3g0448371 Rosa chinensis HOM05D005212 ORTHO05D006353 1.7e-36 157.5 248 38.3
AagrBONN_evm.TU.Sc2ySwM_344.3756 Anthoceros agrestis HOM05D005212 ORTHO05D006353 3.0e-36 156.8 263 38.8
Psat7g082520 Pisum sativum HOM05D005212 ORTHO05D006353 3.0e-36 156.8 245 38.4
RcHm_v2.0_Chr4g0443611 Rosa chinensis HOM05D005212 ORTHO05D006353 3.0e-36 156.8 248 38.3
TPR.G5141 Trifolium pratense HOM05D005212 ORTHO05D006353 3.0e-36 156.8 245 38.0
CSS0012951 Camellia sinensis var. sinensis HOM05D005212 ORTHO05D006353 5.1e-36 156.0 250 37.6
Sopen04g002980 Solanum pennellii HOM05D005212 ORTHO05D006353 5.1e-36 156.0 248 36.7
Migut.E00446 Erythranthe guttata HOM05D005212 ORTHO05D006353 6.6e-36 155.6 247 36.8
QL03p033836 Quercus lobata HOM05D005212 ORTHO05D006353 6.6e-36 155.6 208 40.9
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 8.7e-36 155.2 243 39.1
Glyma.08G095400 Glycine max HOM05D005212 ORTHO05D006353 1.5e-35 154.5 251 37.1
HPP92_020815 Vanilla planifolia HOM05D005212 ORTHO05D006353 1.5e-35 154.5 268 34.7
Ca_24783_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 1.9e-35 154.1 247 38.9
Lsat_1_v5_gn_4_8681 Lactuca sativa HOM05D005212 ORTHO05D006353 3.3e-35 153.3 243 37.9
Pp3c25_10280 Physcomitrium patens HOM05D005212 ORTHO05D006353 4.3e-35 152.9 253 37.9
Thecc.04G190200 Theobroma cacao HOM05D005212 ORTHO05D006353 4.3e-35 152.9 248 38.3
Zm00001eb210590 Zea mays HOM05D005212 ORTHO05D006353 4.3e-35 152.9 269 36.8
EL10Ac9g21945 Beta vulgaris HOM05D005212 ORTHO05D006353 5.6e-35 152.5 249 36.9
Hma1.2p1_0060F.1_g032750 Hydrangea macrophylla HOM05D005212 ORTHO05D006353 5.6e-35 152.5 248 37.9
CAN.G458.6 Capsicum annuum HOM05D005212 ORTHO05D006353 7.3e-35 152.1 249 36.9
BraA04t18796Z Brassica rapa HOM05D000073 ORTHO05D000033 1.6e-34 151.0 255 38.4
CsaV3_5G028340 Cucumis sativus L. HOM05D005212 ORTHO05D006353 1.6e-34 151.0 250 34.4
Os03g0853900 Oryza sativa ssp. japonica HOM05D005212 ORTHO05D006353 2.8e-34 150.2 269 34.9
TWI60G0083 Tripterygium wilfordii HOM05D005212 ORTHO05D006353 2.8e-34 150.2 247 37.7
Sed0020748 Sechium edule HOM05D005212 ORTHO05D006353 3.6e-34 149.8 253 35.6
Gohir.A09G208525 Gossypium hirsutum HOM05D005212 ORTHO05D006353 6.2e-34 149.1 254 36.2
PGSC0003DMG400029477 Solanum tuberosum HOM05D005212 ORTHO05D006353 8.1e-34 148.7 250 34.8
Aa31LG1G21440 Aethionema arabicum HOM05D005212 ORTHO05D006353 1.1e-33 148.3 254 37.8
Duzib268G0887 Durio zibethinus HOM05D005212 ORTHO05D006353 1.1e-33 148.3 249 37.8
PSO478G2757 Papaver somniferum HOM05D005212 ORTHO05D006353 1.1e-33 148.3 250 35.6
Sed0012238 Sechium edule HOM05D005212 ORTHO05D006353 1.4e-33 147.9 210 41.0
PSO017G4317 Papaver somniferum HOM05D005212 ORTHO05D006353 2.4e-33 147.1 250 35.6
Gorai.013G143600 Gossypium raimondii HOM05D005212 ORTHO05D006353 4.0e-33 146.4 248 36.7
Gohir.D13G128200 Gossypium hirsutum HOM05D005212 ORTHO05D006353 5.3e-33 146.0 248 36.7
Gohir.D09G202000 Gossypium hirsutum HOM05D005212 ORTHO05D006353 9.0e-33 145.2 248 36.7
CANSAT01G1481 Cannabis sativa HOM05D005212 ORTHO05D006353 1.2e-32 144.8 249 39.8
Haze_10945 Corylus avellana HOM05D005212 ORTHO05D006353 1.2e-32 144.8 247 35.2
Gorai.006G225800 Gossypium raimondii HOM05D005212 ORTHO05D006353 1.2e-32 144.8 248 36.7
Sabra16G0312600 Salix brachista HOM05D005212 ORTHO05D006353 1.5e-32 144.4 277 34.3
PSO339G5759 Papaver somniferum HOM05D005212 ORTHO05D006353 2.6e-32 143.7 252 34.9
Ca_01441_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 4.4e-32 142.9 209 41.1
Sc10g0005560 Simmondsia chinensis HOM05D005212 ORTHO05D006353 7.6e-32 142.1 220 40.5
FAN07G0183 Fragaria x ananassa HOM05D005212 ORTHO05D006353 1.7e-31 141.0 255 35.7
FAN22G0397 Fragaria x ananassa HOM05D005212 ORTHO05D006353 1.7e-31 141.0 227 38.8
Lj3C867T4 Lonicera japonica HOM05D005212 ORTHO05D006353 1.7e-31 141.0 223 39.0
Gohir.A13G124600 Gossypium hirsutum HOM05D005212 ORTHO05D006353 2.2e-31 140.6 253 35.2
Rhsim09G0094100 Rhododendron simsii HOM05D005212 ORTHO05D006353 2.9e-31 140.2 248 34.3
DCAR_014725 Daucus carota HOM05D005212 ORTHO05D006353 3.8e-31 139.8 249 33.7
Cre03.g200991 Chlamydomonas reinhardtii HOM05D005212 ORTHO05D006353 8.4e-31 138.7 277 33.9
GSVIVG01011709001 Vitis vinifera HOM05D005212 ORTHO05D006353 8.4e-31 138.7 200 42.5
FAN17G0532 Fragaria x ananassa HOM05D005212 ORTHO05D006353 1.4e-30 137.9 222 38.3
Duzib151G1103 Durio zibethinus HOM05D005212 ORTHO05D006353 3.2e-30 136.7 247 34.8
Nitab4.5_0009115g0010 Nicotiana tabacum HOM05D005212 ORTHO05D006353 5.4e-30 136.0 250 34.4
SMO334G0102 Selaginella moellendorffii HOM05D005212 ORTHO05D006353 9.3e-30 135.2 243 35.0
FAN12G1848 Fragaria x ananassa HOM05D005212 ORTHO05D006353 2.1e-29 134.0 289 33.2
Oeu014050.1 Olea europaea HOM05D005212 ORTHO05D006353 4.6e-29 132.9 243 35.8
MELO3C005296.2 Cucumis melo HOM05D005212 ORTHO05D006353 7.9e-29 132.1 177 41.8
SalBow2G0696 Salvia bowleyana HOM05D005212 ORTHO05D006353 1.3e-28 131.3 227 35.7
vmacro10659 Vaccinium macrocarpon HOM05D005212 ORTHO05D006353 1.3e-28 131.3 217 36.9
ClCG01G006340 Citrullus lanatus HOM05D005212 ORTHO05D006353 1.7e-28 131.0 281 32.4
Dinv36246 Davidia involucrata HOM05D005212 ORTHO05D006353 3.9e-28 129.8 200 40.0
Oeu063592.1 Olea europaea HOM05D005212 ORTHO05D006353 3.9e-28 129.8 208 38.5
BcaC01g05169 Brassica carinata HOM05D005212 ORTHO05D006353 6.6e-28 129.0 253 36.0
SGA_v2.0_scaffold39G15210 Striga asiatica HOM05D005212 ORTHO05D006353 6.6e-28 129.0 250 32.4
MSTRG.13603 Avicennia marina HOM05D005212 ORTHO05D006353 1.9e-27 127.5 199 39.7
VMungo1080G0912 Vigna mungo HOM05D005212 ORTHO05D006353 9.6e-27 125.2 214 36.0
Dinv28041 Davidia involucrata HOM05D005212 ORTHO05D006353 2.8e-26 123.6 171 45.0
PSO384G3589 Papaver somniferum HOM05D005212 ORTHO05D006353 2.8e-26 123.6 213 36.6
Manes.15G130900 Manihot esculenta HOM05D005212 ORTHO05D006353 1.1e-25 121.7 206 37.4
Thhalv10014438m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.2e-24 118.2 206 40.3
Cc04_g08850 Coffea canephora HOM05D005212 ORTHO05D006353 4.5e-24 116.3 171 38.0
AUR62008760 Chenopodium quinoa HOM05D005212 ORTHO05D006353 5.8e-24 115.9 252 31.7
AUR62025478 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.3e-23 114.8 220 33.6
BolC3t15307H Brassica oleracea HOM05D005212 ORTHO05D006353 1.2e-21 108.2 211 35.5
CBR_g30204 Chara braunii HOM05D000019 ORTHO05D000353 2.1e-21 107.5 141 45.4
Ah.11g044490 Amaranthus hybridus HOM05D005212 ORTHO05D006353 7.9e-21 105.5 250 32.0
Hund05206 Selenicereus undatus HOM05D005212 ORTHO05D006353 1.8e-20 104.4 203 36.9
Ca_09937_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 2.3e-20 104.0 209 32.5
Ca_09949_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 2.3e-20 104.0 209 32.5
AUR62014219 Chenopodium quinoa HOM05D005212 ORTHO05D006353 9.6e-19 98.6 178 33.7
AT5G03830 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 2.1e-18 97.4 128 44.5
BcaNung07052 Brassica carinata HOM05D005212 ORTHO05D006353 8.1e-18 95.5 246 29.3
CDE04G0882 Ceratophyllum demersum HOM05D005212 ORTHO05D006353 1.1e-17 95.1 132 40.9
Cpa.g.sc1084.4 Carica papaya HOM05D005212 ORTHO05D006353 1.4e-17 94.7 126 46.0
AUR62014218 Chenopodium quinoa HOM05D005212 ORTHO05D006353 2.4e-17 94.0 243 30.0
AUR62018080 Chenopodium quinoa HOM05D005212 ORTHO05D006353 4.0e-17 93.2 198 33.3
AL6G13400 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 2.0e-16 90.9 119 45.4
BcaB01g03308 Brassica carinata HOM05D005212 ORTHO05D006353 1.7e-15 87.8 221 31.7
SEGI_04595 Sequoiadendron giganteum HOM05D005212 ORTHO05D006353 3.8e-15 86.7 112 40.2
C03p29590 Brassica napus HOM05D005212 ORTHO05D006353 4.2e-14 83.2 215 31.6
unitig_22.g5595 Utricularia gibba HOM05D005212 ORTHO05D006353 5.5e-14 82.8 167 32.3
Cfa023609 Carpinus fangiana HOM05D005212 ORTHO05D006353 6.0e-13 79.3 186 29.6
CiPaw.06G048200 Carya illinoinensis HOM05D005212 ORTHO05D006353 7.9e-13 79.0 122 37.7
Hund24107 Selenicereus undatus HOM05D005212 ORTHO05D006353 5.1e-12 76.3 123 40.7
COL.COLO4_35970 Corchorus olitorius HOM05D005212 ORTHO05D006353 1.5e-08 64.7 173 27.7
Thhalv10015472m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.0e-07 62.0 76 47.4
PRCOL_00004527 Prasinoderma coloniale HOM05D005212 ORTHO05D006353 2.2e-07 60.8 195 30.8
Cc04_g08860 Coffea canephora HOM05D005212 ORTHO05D006353 4.2e-06 56.6 74 41.9


User provided reference genes

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