Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 2.8e-271 937.9 454 100.0
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 1.4e-44 184.9 450 32.4
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 1.2e-27 128.6 276 31.9
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 7.7e-27 125.9 356 31.5
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.0e-26 125.6 311 31.5
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 1.3e-26 125.2 311 31.5
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 2.9e-26 124.0 304 31.2
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 5.0e-26 123.2 301 31.6
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 6.5e-26 122.9 307 31.6
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 8.5e-26 122.5 296 32.1
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.2e-24 118.6 338 31.1
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 2.7e-24 117.5 325 30.5
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 3.6e-24 117.1 304 30.3
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 1.0e-23 115.5 328 29.6
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 1.4e-23 115.2 296 31.4
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 1.4e-23 115.2 290 31.0
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 1.8e-23 114.8 290 30.7
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 2.3e-23 114.4 309 31.4
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 3.0e-23 114.0 290 31.0
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 3.9e-23 113.6 322 30.1
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 5.1e-23 113.2 277 31.8
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 5.1e-23 113.2 292 31.8
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 5.1e-23 113.2 282 31.6
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 5.1e-23 113.2 322 30.7
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 6.7e-23 112.8 294 29.9
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 6.7e-23 112.8 288 31.6
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 6.7e-23 112.8 296 30.1
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 6.7e-23 112.8 300 31.0
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.5e-22 111.7 295 29.5
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 1.5e-22 111.7 301 29.9
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 2.0e-22 111.3 298 29.9
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.0e-22 111.3 295 29.2
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 2.0e-22 111.3 279 30.1
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-22 110.9 295 29.2
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-22 110.9 295 29.2
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-22 110.9 295 29.2
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-22 110.9 295 29.2
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-22 110.9 295 29.2
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-22 110.9 299 28.8
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-22 110.9 295 29.2
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 2.6e-22 110.9 277 28.2
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.3e-22 110.5 299 28.8
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 3.3e-22 110.5 302 30.1
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 3.3e-22 110.5 290 30.7
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 4.4e-22 110.2 298 28.5
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.4e-22 110.2 293 29.4
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 4.4e-22 110.2 294 28.9
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.7e-22 109.8 297 29.0
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.7e-22 109.8 297 29.0
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 9.7e-22 109.0 297 29.3
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 9.7e-22 109.0 291 29.6
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 1.3e-21 108.6 321 28.3
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 1.3e-21 108.6 299 30.4
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 2.2e-21 107.8 294 31.0
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 3.7e-21 107.1 284 28.9
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 3.7e-21 107.1 299 29.8
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 3.7e-21 107.1 287 27.9
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 4.8e-21 106.7 279 29.0
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 4.8e-21 106.7 292 30.5
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 4.8e-21 106.7 303 27.7
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 1.1e-20 105.5 283 29.7
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 1.1e-20 105.5 291 29.2
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 1.1e-20 105.5 286 30.1
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 1.4e-20 105.1 279 30.5
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 1.4e-20 105.1 294 31.0
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 1.8e-20 104.8 296 29.4
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 2.4e-20 104.4 282 28.7
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 2.4e-20 104.4 295 30.2
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 2.4e-20 104.4 292 29.5
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 3.1e-20 104.0 280 28.9
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 4.1e-20 103.6 326 27.3
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 5.3e-20 103.2 288 29.2
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 5.3e-20 103.2 313 27.8
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 5.3e-20 103.2 299 29.1
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 7.0e-20 102.8 293 29.4
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 7.0e-20 102.8 289 29.8
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 7.0e-20 102.8 287 30.0
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 9.1e-20 102.4 245 33.5
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 1.5e-19 101.7 292 28.1
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 1.5e-19 101.7 280 28.9
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 2.0e-19 101.3 322 29.2
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 2.0e-19 101.3 320 27.8
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 2.6e-19 100.9 295 27.8
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 2.6e-19 100.9 283 28.3
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 2.6e-19 100.9 279 28.3
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 2.6e-19 100.9 293 29.4
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 3.5e-19 100.5 278 30.9
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 3.5e-19 100.5 205 35.1
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 4.5e-19 100.1 283 28.3
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 7.7e-19 99.4 232 31.0
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 1.7e-18 98.2 350 27.4
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 1.7e-18 98.2 296 29.1
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 1.7e-18 98.2 303 28.7
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 2.2e-18 97.8 290 28.6
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 3.8e-18 97.1 286 30.4
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 3.8e-18 97.1 290 29.0
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 4.2e-17 93.6 281 28.1
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 5.5e-17 93.2 368 27.2
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 2.7e-16 90.9 279 28.0
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 3.6e-16 90.5 291 27.8
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 4.7e-16 90.1 205 31.7
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 8.0e-16 89.4 289 28.4
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 5.9e-11 73.2 278 26.6
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 8.0e-08 62.8 123 31.7


User provided reference genes

Program Settings