Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 9.5e-173 610.1 322 100.0
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 4.0e-30 136.3 304 33.9
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 1.5e-29 134.4 318 33.3
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.3e-28 131.3 324 31.2
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.7e-28 131.0 328 30.2
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 8.4e-28 128.6 305 33.1
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 9.3e-27 125.2 324 29.3
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 6.7e-25 119.0 299 31.8
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 1.5e-24 117.9 326 29.8
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 1.9e-24 117.5 326 29.8
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 3.3e-24 116.7 326 30.1
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 3.3e-24 116.7 337 27.3
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 9.6e-24 115.2 326 28.8
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 1.6e-23 114.4 333 30.0
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 2.1e-23 114.0 331 27.2
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 2.8e-23 113.6 326 29.1
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 2.8e-23 113.6 304 28.6
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 2.8e-23 113.6 304 28.6
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.8e-23 113.6 339 28.6
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 2.8e-23 113.6 326 28.2
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 2.8e-23 113.6 326 29.4
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 3.6e-23 113.2 339 28.6
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 3.6e-23 113.2 331 27.5
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 4.8e-23 112.8 330 27.6
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 1.1e-22 111.7 329 29.8
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 2.4e-22 110.5 323 28.2
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 3.1e-22 110.2 340 27.9
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 4.0e-22 109.8 326 28.2
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 4.0e-22 109.8 326 27.9
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 4.0e-22 109.8 326 27.9
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.3e-22 109.4 330 27.9
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 5.3e-22 109.4 304 28.6
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 5.3e-22 109.4 327 27.5
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 1.2e-21 108.2 336 27.7
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.2e-21 108.2 337 26.1
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 1.2e-21 108.2 337 27.3
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 1.5e-21 107.8 310 28.7
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 1.5e-21 107.8 335 27.8
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 1.5e-21 107.8 337 28.2
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 2.0e-21 107.5 332 27.4
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 2.6e-21 107.1 317 28.1
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 2.6e-21 107.1 304 28.3
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 3.4e-21 106.7 337 26.1
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 4.5e-21 106.3 325 28.3
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 4.5e-21 106.3 323 26.6
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 4.5e-21 106.3 323 26.6
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 5.8e-21 105.9 329 27.4
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 7.6e-21 105.5 335 27.5
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 7.6e-21 105.5 332 27.7
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 7.6e-21 105.5 332 27.4
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 9.9e-21 105.1 335 28.1
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 9.9e-21 105.1 325 28.3
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 9.9e-21 105.1 314 28.0
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 9.9e-21 105.1 314 28.0
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 1.3e-20 104.8 318 27.7
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 1.3e-20 104.8 310 28.4
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 1.3e-20 104.8 333 26.7
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 1.7e-20 104.4 310 27.4
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.7e-20 104.4 332 27.1
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.7e-20 104.4 310 28.4
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.7e-20 104.4 329 27.4
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 2.9e-20 103.6 310 27.4
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 2.9e-20 103.6 327 26.3
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 3.8e-20 103.2 310 28.4
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 3.8e-20 103.2 310 28.4
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 3.8e-20 103.2 323 26.3
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 3.8e-20 103.2 312 27.9
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 3.8e-20 103.2 310 28.1
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 3.8e-20 103.2 333 29.4
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 4.9e-20 102.8 331 29.3
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 4.9e-20 102.8 303 27.4
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 4.9e-20 102.8 310 28.1
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 6.4e-20 102.4 332 27.1
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 6.4e-20 102.4 325 26.8
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 1.4e-19 101.3 310 27.1
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.4e-19 100.5 326 28.8
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 3.2e-19 100.1 318 28.9
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 3.2e-19 100.1 303 26.1
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 4.2e-19 99.8 326 27.0
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 5.5e-19 99.4 337 26.1
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 5.5e-19 99.4 308 28.6
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 9.3e-19 98.6 326 26.7
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 9.3e-19 98.6 316 26.6
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 9.3e-19 98.6 279 29.7
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 1.6e-18 97.8 302 28.5
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 2.1e-18 97.4 329 25.8
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.1e-18 97.4 311 28.0
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 2.7e-18 97.1 304 27.0
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 2.7e-18 97.1 313 26.5
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 1.0e-17 95.1 329 25.8
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 1.0e-17 95.1 303 25.4
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 1.3e-17 94.7 325 27.4
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 2.3e-17 94.0 289 31.1
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 3.0e-17 93.6 338 26.6
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 3.9e-17 93.2 299 27.1
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.9e-17 93.2 311 28.0
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 3.9e-17 93.2 312 24.7
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 5.1e-17 92.8 299 26.8
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 6.7e-17 92.4 328 26.5
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 1.9e-16 90.9 313 26.5
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 3.3e-16 90.1 310 27.4
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 4.3e-16 89.7 220 28.6
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 2.8e-15 87.0 275 27.6
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 6.2e-15 85.9 290 29.3
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 2.6e-13 80.5 339 25.7
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.0e-12 78.6 302 25.8
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.1e-11 75.1 201 28.4
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.1e-11 75.1 156 31.4
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.2e-10 71.6 276 26.8
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 3.5e-10 70.1 104 38.5


User provided reference genes

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