Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G082 Micromonas commoda HOM05D005813 ORTHO05D007310 3.9e-282 974.2 506 100.0
VMungo1383G1345 Vigna mungo HOM05D005813 ORTHO05D007310 1.1e-47 195.3 391 35.5
HanXRQChr04g0122421 Helianthus annuus HOM05D005813 ORTHO05D007310 2.2e-46 191.0 400 33.2
ClCG05G002290 Citrullus lanatus HOM05D005813 ORTHO05D007310 8.2e-46 189.1 404 32.9
CARHR248130 Cardamine hirsuta HOM05D005813 ORTHO05D007310 1.4e-45 188.3 397 34.0
Glyma.18G220700 Glycine max HOM05D005813 ORTHO05D007310 1.4e-45 188.3 400 32.8
Atru.chr5.306 Acer truncatum HOM05D005813 ORTHO05D007310 1.8e-45 188.0 387 32.8
Lsat_1_v5_gn_7_7160 Lactuca sativa HOM05D005813 ORTHO05D007310 1.8e-45 188.0 395 32.4
Sed0028100 Sechium edule HOM05D005813 ORTHO05D007310 1.8e-45 188.0 409 31.8
CsaV3_3G009700 Cucumis sativus L. HOM05D005813 ORTHO05D007310 2.4e-45 187.6 408 32.6
Cc02_g23900 Coffea canephora HOM05D005813 ORTHO05D007310 4.1e-45 186.8 411 34.3
MELO3C006191.2 Cucumis melo HOM05D005813 ORTHO05D007310 5.3e-45 186.4 406 32.8
BcaB01g02210 Brassica carinata HOM05D005813 ORTHO05D007310 7.0e-45 186.0 403 33.7
Lj1g0017617 Lotus japonicus HOM05D005813 ORTHO05D007310 7.0e-45 186.0 402 33.8
C09p00110 Brassica napus HOM05D005813 ORTHO05D007310 1.2e-44 185.3 402 33.3
BraA09t35685Z Brassica rapa HOM05D005813 ORTHO05D007310 1.2e-44 185.3 402 33.3
Hund27345 Selenicereus undatus HOM05D005813 ORTHO05D007310 1.2e-44 185.3 413 32.0
Aa31LG5G9310 Aethionema arabicum HOM05D005813 ORTHO05D007310 1.6e-44 184.9 379 33.0
BcaC04g24202 Brassica carinata HOM05D005813 ORTHO05D007310 1.6e-44 184.9 402 33.1
BolC9t52946H Brassica oleracea HOM05D005813 ORTHO05D007310 1.6e-44 184.9 402 33.1
Glyma.09G269300 Glycine max HOM05D005813 ORTHO05D007310 2.0e-44 184.5 400 33.8
Potri.014G069400 Populus trichocarpa HOM05D005813 ORTHO05D007310 2.0e-44 184.5 407 32.9
Lalb_Chr03g0039571 Lupinus albus HOM05D005813 ORTHO05D007310 2.6e-44 184.1 396 33.8
unitig_749.g14372 Utricularia gibba HOM05D005813 ORTHO05D007310 3.5e-44 183.7 415 33.7
Gohir.A08G031100 Gossypium hirsutum HOM05D005813 ORTHO05D007310 4.5e-44 183.3 403 33.5
Gohir.D08G042200 Gossypium hirsutum HOM05D005813 ORTHO05D007310 4.5e-44 183.3 398 33.9
Potri.002G148100 Populus trichocarpa HOM05D005813 ORTHO05D007310 5.9e-44 183.0 413 32.7
Ciclev10020183m.g Citrus clementina HOM05D005813 ORTHO05D007310 1.7e-43 181.4 404 32.9
PSO478G4467 Papaver somniferum HOM05D005813 ORTHO05D007310 1.7e-43 181.4 400 32.2
Phvul.008G076400 Phaseolus vulgaris HOM05D005813 ORTHO05D007310 1.7e-43 181.4 394 32.7
Medtr7g074890 Medicago truncatula HOM05D005813 ORTHO05D007310 2.2e-43 181.0 404 32.9
Sp6g00150 Schrenkiella parvula HOM05D005813 ORTHO05D007310 2.2e-43 181.0 397 33.0
AUR62004213 Chenopodium quinoa HOM05D005813 ORTHO05D007310 3.8e-43 180.3 418 32.8
Thecc.01G376600 Theobroma cacao HOM05D005813 ORTHO05D007310 3.8e-43 180.3 410 32.7
PGR031G3848 Punica granatum HOM05D005813 ORTHO05D007310 5.0e-43 179.9 399 33.3
Mapoly0037s0016 Marchantia polymorpha HOM05D005813 ORTHO05D007310 6.5e-43 179.5 387 33.3
SGA_v2.0_scaffold153G37009 Striga asiatica HOM05D005813 ORTHO05D007310 6.5e-43 179.5 417 33.8
Aqoxy7G00631 Aquilegia oxysepala HOM05D005813 ORTHO05D007310 8.5e-43 179.1 416 33.2
Carub.0006s3714 Capsella rubella HOM05D005813 ORTHO05D007310 8.5e-43 179.1 398 33.4
Migut.B01633 Erythranthe guttata HOM05D005813 ORTHO05D007310 8.5e-43 179.1 396 32.8
Thhalv10028676m.g Eutrema salsugineum HOM05D005813 ORTHO05D007310 8.5e-43 179.1 381 33.3
QL08p052527 Quercus lobata HOM05D005813 ORTHO05D007310 8.5e-43 179.1 407 33.2
Sc02g0002610 Simmondsia chinensis HOM05D005813 ORTHO05D007310 8.5e-43 179.1 394 32.7
ATR0810G089 Amborella trichopoda HOM05D005813 ORTHO05D007310 1.1e-42 178.7 418 31.6
EL10Ac1g00888 Beta vulgaris HOM05D005813 ORTHO05D007310 1.5e-42 178.3 434 33.2
CBR_g21297 Chara braunii HOM05D005813 ORTHO05D007310 1.5e-42 178.3 420 33.6
Ca_11657_v3 Cicer arietinum L. HOM05D005813 ORTHO05D007310 1.5e-42 178.3 400 32.2
Manes.05G045300 Manihot esculenta HOM05D005813 ORTHO05D007310 1.9e-42 177.9 415 33.7
Pp3c19_7620 Physcomitrium patens HOM05D005813 ORTHO05D007310 1.9e-42 177.9 423 33.1
Ah.05g174210 Amaranthus hybridus HOM05D005813 ORTHO05D007310 2.5e-42 177.6 420 32.9
arahy.Tifrunner.gnm1.ann1.4B5N4V Arachis hypogaea HOM05D005813 ORTHO05D007310 2.5e-42 177.6 397 32.7
CDE11G1084 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 2.5e-42 177.6 413 31.2
MBI04_g35272_MAGBIO Magnolia biondii HOM05D005813 ORTHO05D007310 2.5e-42 177.6 408 32.4
AagrBONN_evm.TU.Sc2ySwM_117.33 Anthoceros agrestis HOM05D005813 ORTHO05D007310 4.2e-42 176.8 437 30.7
AL6G53420 Arabidopsis lyrata HOM05D005813 ORTHO05D007310 5.5e-42 176.4 395 32.9
PSO782G1692 Papaver somniferum HOM05D005813 ORTHO05D007310 5.5e-42 176.4 400 31.5
CiPaw.02G167800 Carya illinoinensis HOM05D005813 ORTHO05D007310 7.2e-42 176.0 406 32.3
Gohir.A08G134600 Gossypium hirsutum HOM05D005813 ORTHO05D007310 7.2e-42 176.0 379 31.9
MD02G1204700 Malus domestica HOM05D005813 ORTHO05D007310 7.2e-42 176.0 407 32.2
Nn4g26391 Nelumbo nucifera HOM05D005813 ORTHO05D007310 7.2e-42 176.0 406 32.8
THA.LOC104817009 Tarenaya hassleriana HOM05D005813 ORTHO05D007310 7.2e-42 176.0 386 32.1
TPR.G29407 Trifolium pratense HOM05D005813 ORTHO05D007310 9.4e-42 175.6 397 33.2
CDE09G1050 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 1.2e-41 175.3 403 31.5
Gohir.D08G155500 Gossypium hirsutum HOM05D005813 ORTHO05D007310 1.2e-41 175.3 377 32.1
Gorai.004G161700 Gossypium raimondii HOM05D005813 ORTHO05D007310 1.2e-41 175.3 377 32.1
SalBow5G4545 Salvia bowleyana HOM05D005813 ORTHO05D007310 1.2e-41 175.3 387 33.3
AT4G00090 Arabidopsis thaliana HOM05D005813 ORTHO05D007310 2.1e-41 174.5 395 32.4
Nn1g01240 Nelumbo nucifera HOM05D005813 ORTHO05D007310 2.1e-41 174.5 404 33.2
Duzib138G0196 Durio zibethinus HOM05D005813 ORTHO05D007310 2.7e-41 174.1 429 30.3
Sabra02G0115400 Salix brachista HOM05D005813 ORTHO05D007310 3.6e-41 173.7 432 32.2
Sabra02G0117100 Salix brachista HOM05D005813 ORTHO05D007310 3.6e-41 173.7 427 32.6
Duzib133G0639 Durio zibethinus HOM05D005813 ORTHO05D007310 4.7e-41 173.3 407 31.7
Zm00001eb065090 Zea mays HOM05D005813 ORTHO05D007310 4.7e-41 173.3 399 32.8
Eucgr.D02453 Eucalyptus grandis HOM05D005813 ORTHO05D007310 8.0e-41 172.6 410 32.2
MD07G1121300 Malus domestica HOM05D005813 ORTHO05D007310 1.0e-40 172.2 407 32.7
CSS0030666 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 2.3e-40 171.0 405 32.3
CSS0042195 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 2.3e-40 171.0 405 32.3
CiPaw.01G262200 Carya illinoinensis HOM05D005813 ORTHO05D007310 2.3e-40 171.0 404 32.2
arahy.Tifrunner.gnm1.ann1.DKE7V3 Arachis hypogaea HOM05D005813 ORTHO05D007310 3.0e-40 170.6 393 32.6
Sopen01g037050 Solanum pennellii HOM05D005813 ORTHO05D007310 3.0e-40 170.6 377 33.2
Nitab4.5_0004917g0040 Nicotiana tabacum HOM05D005813 ORTHO05D007310 4.0e-40 170.2 426 31.0
MSTRG.17192 Avicennia marina HOM05D005813 ORTHO05D007310 5.2e-40 169.9 410 32.4
Cfa001724 Carpinus fangiana HOM05D005813 ORTHO05D007310 5.2e-40 169.9 406 33.0
FAN01G0479 Fragaria x ananassa HOM05D005813 ORTHO05D007310 5.2e-40 169.9 382 31.7
Solyc01g091310.3 Solanum lycopersicum HOM05D005813 ORTHO05D007310 5.2e-40 169.9 392 33.4
TWI59G1428 Tripterygium wilfordii HOM05D005813 ORTHO05D007310 5.2e-40 169.9 407 31.7
SEGI_07293 Sequoiadendron giganteum HOM05D005813 ORTHO05D007310 1.2e-39 168.7 398 33.7
TAR374G0529 Trochodendron aralioides HOM05D005813 ORTHO05D007310 1.2e-39 168.7 402 30.1
FvH4_7g11840 Fragaria vesca HOM05D005813 ORTHO05D007310 1.5e-39 168.3 375 31.5
FAN06G0614 Fragaria x ananassa HOM05D005813 ORTHO05D007310 1.5e-39 168.3 375 31.5
CANSAT56G4177 Cannabis sativa HOM05D005813 ORTHO05D007310 2.0e-39 167.9 378 33.6
CBR_g23070 Chara braunii HOM05D005813 ORTHO05D007310 2.0e-39 167.9 410 32.9
Cpa.g.sc18.111 Carica papaya HOM05D005813 ORTHO05D007310 2.6e-39 167.5 406 32.0
FAN10G1195 Fragaria x ananassa HOM05D005813 ORTHO05D007310 3.3e-39 167.2 407 31.2
Prupe.2G145000 Prunus persica HOM05D005813 ORTHO05D007310 3.3e-39 167.2 392 31.1
Sed0000354 Sechium edule HOM05D005813 ORTHO05D007310 3.3e-39 167.2 388 31.2
Actinidia12685 Actinidia chinensis HOM05D005813 ORTHO05D007310 5.7e-39 166.4 392 31.9
FAN10G2798 Fragaria x ananassa HOM05D005813 ORTHO05D007310 7.5e-39 166.0 378 32.3
Lj7A528T62 Lonicera japonica HOM05D005813 ORTHO05D007310 7.5e-39 166.0 416 32.5
RcHm_v2.0_Chr1g0350521 Rosa chinensis HOM05D005813 ORTHO05D007310 1.7e-38 164.9 378 31.7
GSVIVG01027606001 Vitis vinifera HOM05D005813 ORTHO05D007310 3.7e-38 163.7 342 34.2
unitig_76.g29089 Utricularia gibba HOM05D005813 ORTHO05D007310 4.8e-38 163.3 336 35.1
Rhsim01G0147300 Rhododendron simsii HOM05D005813 ORTHO05D007310 6.3e-38 162.9 411 30.9
FAN06G1564 Fragaria x ananassa HOM05D005813 ORTHO05D007310 8.2e-38 162.5 390 30.8
Dinv43710 Davidia involucrata HOM05D005813 ORTHO05D007310 1.4e-37 161.8 345 33.0
SMO367G0685 Selaginella moellendorffii HOM05D005813 ORTHO05D007310 5.3e-37 159.8 381 30.2
Nitab4.5_0000457g0240 Nicotiana tabacum HOM05D005813 ORTHO05D007310 1.6e-36 158.3 393 31.6
HPP92_003519 Vanilla planifolia HOM05D005813 ORTHO05D007310 1.6e-36 158.3 386 31.6
Gorai.004G040800 Gossypium raimondii HOM05D005813 ORTHO05D007310 2.7e-36 157.5 444 29.7
Oeu055488.1 Olea europaea HOM05D005813 ORTHO05D007310 1.7e-35 154.8 405 31.4
AUR62013635 Chenopodium quinoa HOM05D005813 ORTHO05D007310 6.5e-35 152.9 424 28.8
FAN03G1318 Fragaria x ananassa HOM05D005813 ORTHO05D007310 1.9e-34 151.4 319 32.6
Haze_16813 Corylus avellana HOM05D005813 ORTHO05D007310 1.6e-33 148.3 282 33.3
Cre02.g102450 Chlamydomonas reinhardtii HOM05D005813 ORTHO05D007310 6.1e-33 146.4 423 30.5
Psat3g115920 Pisum sativum HOM05D005813 ORTHO05D007310 1.0e-32 145.6 408 29.7
SHI01708 Sapria himalayana HOM05D005813 ORTHO05D007310 1.8e-32 144.8 407 29.7
vmacro21010 Vaccinium macrocarpon HOM05D005813 ORTHO05D007310 2.3e-32 144.4 418 31.3
Peaxi162Scf00013g03441 Petunia axillaris HOM05D005813 ORTHO05D007310 2.0e-31 141.4 331 34.1
A09p00750 Brassica napus HOM05D005813 ORTHO05D007310 3.4e-31 140.6 266 33.8
PGSC0003DMG400012776 Solanum tuberosum HOM05D005813 ORTHO05D007310 4.1e-29 133.7 263 31.9
PSO170G3521 Papaver somniferum HOM05D005813 ORTHO05D007310 3.8e-27 127.1 296 32.1
Psat3g202640 Pisum sativum HOM05D005813 ORTHO05D007310 4.0e-24 117.1 307 30.6
PSO782G5041 Papaver somniferum HOM05D005813 ORTHO05D007310 5.2e-24 116.7 371 29.4
PSO675G1684 Papaver somniferum HOM05D005813 ORTHO05D007310 1.6e-20 105.1 227 33.0
Actinidia33466 Actinidia chinensis HOM05D005813 ORTHO05D007310 4.3e-18 97.1 191 34.6
COL.COLO4_12543 Corchorus olitorius HOM05D005813 ORTHO05D007310 8.0e-17 92.8 282 30.1
DCAR_015903 Daucus carota HOM05D005813 ORTHO05D007310 1.3e-14 85.5 261 29.1
PSO478G0826 Papaver somniferum HOM05D005813 ORTHO05D007310 7.5e-07 59.7 77 41.6


User provided reference genes

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