Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 9.1e-306 1052.7 529 100.0
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 4.1e-32 143.7 404 29.7
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 2.5e-29 134.4 493 26.4
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 5.6e-29 133.3 404 28.0
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 2.4e-27 127.9 404 26.5
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 5.2e-27 126.7 399 27.1
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 7.6e-26 122.9 413 27.6
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 7.1e-24 116.3 514 27.2
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 3.9e-22 110.5 401 26.4
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 5.1e-22 110.2 412 26.2
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 5.1e-22 110.2 364 28.3
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 4.3e-21 107.1 407 27.3
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 4.3e-21 107.1 407 27.3
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 9.6e-21 105.9 424 26.9
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 2.1e-20 104.8 393 26.0
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 2.8e-20 104.4 401 27.7
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 2.8e-20 104.4 417 25.4
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 3.6e-20 104.0 424 26.7
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 6.2e-20 103.2 407 27.0
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.8e-19 101.7 412 26.5
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 2.4e-19 101.3 413 25.9
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 4.0e-19 100.5 419 24.6
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 4.0e-19 100.5 304 29.6
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 1.5e-18 98.6 396 25.3
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 1.5e-18 98.6 402 26.4
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 1.5e-18 98.6 411 25.8
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 2.0e-18 98.2 414 26.1
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 2.0e-18 98.2 439 26.7
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 2.0e-18 98.2 404 25.2
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 2.6e-18 97.8 393 25.4
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 2.6e-18 97.8 400 24.0
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 2.6e-18 97.8 404 27.0
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 3.4e-18 97.4 400 24.0
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 4.4e-18 97.1 417 25.2
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 7.6e-18 96.3 407 26.8
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 1.7e-17 95.1 420 25.5
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 4.9e-17 93.6 377 27.1
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 6.4e-17 93.2 401 25.4
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 6.4e-17 93.2 429 25.2
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 1.9e-16 91.7 421 25.7
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.9e-16 91.7 414 24.6
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 1.9e-16 91.7 421 24.5
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 2.4e-16 91.3 393 26.2
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 4.2e-16 90.5 413 24.2
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 4.2e-16 90.5 411 26.3
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 5.4e-16 90.1 401 25.9
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.4e-16 90.1 414 24.6
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 5.4e-16 90.1 405 24.9
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 5.4e-16 90.1 416 26.4
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 5.4e-16 90.1 409 25.4
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 7.1e-16 89.7 406 24.1
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 9.3e-16 89.4 423 23.6
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 9.3e-16 89.4 394 24.6
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 9.3e-16 89.4 402 25.4
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.2e-15 89.0 414 24.2
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 2.1e-15 88.2 210 31.0
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 2.7e-15 87.8 411 24.8
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 2.7e-15 87.8 420 26.0
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 3.5e-15 87.4 415 24.8
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 3.5e-15 87.4 414 23.9
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 4.6e-15 87.0 412 26.0
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 1.0e-14 85.9 373 26.3
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 1.7e-14 85.1 415 24.8
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 3.0e-14 84.3 345 25.2
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 6.6e-14 83.2 185 29.7
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 6.6e-14 83.2 185 29.7
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 8.7e-14 82.8 415 24.6
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 1.1e-13 82.4 426 24.4
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 1.1e-13 82.4 452 24.1
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 1.1e-13 82.4 411 25.5
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 1.5e-13 82.0 388 24.5
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 1.5e-13 82.0 414 23.9
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 1.5e-13 82.0 303 24.1
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 2.5e-13 81.3 425 24.0
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 3.3e-13 80.9 425 24.5
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 4.3e-13 80.5 411 23.1
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 5.6e-13 80.1 408 25.2
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 5.6e-13 80.1 379 24.3
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 5.6e-13 80.1 460 24.8
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 1.3e-12 79.0 358 27.7
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 2.8e-12 77.8 389 24.7
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 2.8e-12 77.8 406 24.9
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 3.6e-12 77.4 426 25.8
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 8.1e-12 76.3 378 24.6
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 8.1e-12 76.3 453 24.3
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 1.4e-11 75.5 410 24.6
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 2.4e-11 74.7 454 24.0
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 4.0e-11 73.9 413 22.8
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 1.2e-10 72.4 409 24.7
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 3.4e-10 70.9 145 29.7
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 9.9e-10 69.3 443 24.4
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 2.9e-09 67.8 443 24.4
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 8.4e-09 66.2 443 23.9
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 1.1e-08 65.9 443 24.4
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 1.1e-08 65.9 443 24.4
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 1.2e-07 62.4 226 25.2
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 4.6e-07 60.5 205 22.9
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 7.9e-07 59.7 418 23.4


User provided reference genes

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