Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G551 Micromonas commoda HOM05D002338 ORTHO05D006102 0.0e+00 1229.9 754 100.0
Mapoly0022s0109 Marchantia polymorpha HOM05D002338 ORTHO05D006102 1.2e-19 102.8 202 32.7
Pp3c3_11130 Physcomitrium patens HOM05D002338 ORTHO05D006102 3.4e-19 101.3 202 31.7
SEGI_17381 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 1.1e-14 86.3 215 30.7
SalBow4G0953 Salvia bowleyana HOM05D002338 ORTHO05D006102 1.9e-14 85.5 209 26.8
SMO137G0058 Selaginella moellendorffii HOM05D002338 ORTHO05D006102 5.6e-14 84.0 204 31.4
CAN.G943.27 Capsicum annuum HOM05D002338 ORTHO05D006102 7.3e-14 83.6 190 27.9
CDE02G4213 Ceratophyllum demersum HOM05D002338 ORTHO05D006102 2.8e-13 81.6 194 26.3
CBR_g34074 Chara braunii HOM05D000019 ORTHO05D000002 3.6e-13 81.3 152 31.6
Atru.chr2.3891 Acer truncatum HOM05D002338 ORTHO05D006102 1.0e-12 79.7 205 24.4
ATR0794G026 Amborella trichopoda HOM05D002338 ORTHO05D006102 1.0e-12 79.7 289 24.6
AagrBONN_evm.TU.Sc2ySwM_228.3636 Anthoceros agrestis HOM05D002338 ORTHO05D006102 4.0e-12 77.8 196 27.0
Migut.H00865 Erythranthe guttata HOM05D002338 ORTHO05D006102 8.9e-12 76.6 190 24.7
Ciclev10031207m.g Citrus clementina HOM05D002338 ORTHO05D006102 2.0e-11 75.5 193 25.9
CSS0032914 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 2.6e-11 75.1 181 28.7
PGR004G1505 Punica granatum HOM05D002338 ORTHO05D006102 4.4e-11 74.3 179 26.8
Sed0024643 Sechium edule HOM05D002338 ORTHO05D006102 5.7e-11 73.9 281 25.3
Sopen03g002200 Solanum pennellii HOM05D002338 ORTHO05D006102 7.5e-11 73.6 190 26.3
CSS0007657 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 9.8e-11 73.2 181 28.7
PGSC0003DMG400004381 Solanum tuberosum HOM05D002338 ORTHO05D006102 9.8e-11 73.2 190 26.3
unitig_736.g22955 Utricularia gibba HOM05D002338 ORTHO05D006102 1.3e-10 72.8 205 26.8
Dinv32217 Davidia involucrata HOM05D002338 ORTHO05D006102 1.7e-10 72.4 205 24.4
MSTRG.7403 Avicennia marina HOM05D002338 ORTHO05D006102 2.9e-10 71.6 197 24.4
ClCG03G007760 Citrullus lanatus HOM05D002338 ORTHO05D006102 2.9e-10 71.6 281 24.6
CsaV3_1G033380 Cucumis sativus L. HOM05D002338 ORTHO05D006102 4.9e-10 70.9 281 24.2
Cc02_g14860 Coffea canephora HOM05D002338 ORTHO05D006102 6.4e-10 70.5 203 23.2
MELO3C002646.2 Cucumis melo HOM05D002338 ORTHO05D006102 8.3e-10 70.1 281 24.2
Glyma.01G042900 Glycine max HOM05D002338 ORTHO05D006102 1.1e-09 69.7 178 25.8
Lj6g0008317 Lotus japonicus HOM05D002338 ORTHO05D006102 1.1e-09 69.7 217 25.3
Oeu030709.1 Olea europaea HOM05D002338 ORTHO05D006102 1.1e-09 69.7 184 23.9
VMungo1215G0129 Vigna mungo HOM05D002338 ORTHO05D006102 1.1e-09 69.7 172 22.1
Phvul.002G066000 Phaseolus vulgaris HOM05D002338 ORTHO05D006102 1.4e-09 69.3 172 23.3
Sp7g33320 Schrenkiella parvula HOM05D002338 ORTHO05D006102 1.4e-09 69.3 204 27.5
DCAR_005225 Daucus carota HOM05D002338 ORTHO05D006102 1.8e-09 68.9 186 25.3
Rhsim13G0190300 Rhododendron simsii HOM05D002338 ORTHO05D006102 1.8e-09 68.9 198 24.2
Lj1P636T28 Lonicera japonica HOM05D002338 ORTHO05D006102 2.4e-09 68.6 197 23.4
Atru.chr10.1675 Acer truncatum HOM05D002338 ORTHO05D006102 4.1e-09 67.8 203 22.7
GSVIVG01021206001 Vitis vinifera HOM05D002338 ORTHO05D006102 4.1e-09 67.8 184 22.8
GSVIVG01026940001 Vitis vinifera HOM05D002338 ORTHO05D006102 4.1e-09 67.8 184 22.8
EL10Ac8g20603 Beta vulgaris HOM05D002338 ORTHO05D006102 5.4e-09 67.4 207 22.7
SHI24483 Sapria himalayana HOM05D002338 ORTHO05D006102 1.2e-08 66.2 202 23.3
Manes.06G033800 Manihot esculenta HOM05D002338 ORTHO05D006102 1.6e-08 65.9 187 23.5
RcHm_v2.0_Chr5g0010711 Rosa chinensis HOM05D002338 ORTHO05D006102 1.6e-08 65.9 181 24.3
FAN05G1035 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.0e-08 65.5 181 24.9
FAN05G5039 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.0e-08 65.5 181 24.9
BcaNung00583 Brassica carinata HOM05D002338 ORTHO05D006102 2.7e-08 65.1 217 23.0
C01p03420 Brassica napus HOM05D002338 ORTHO05D006102 2.7e-08 65.1 217 23.0
BolC1t00329H Brassica oleracea HOM05D002338 ORTHO05D006102 2.7e-08 65.1 217 23.0
BraA01t00291Z Brassica rapa HOM05D002338 ORTHO05D006102 3.5e-08 64.7 217 22.6
CARHR243880 Cardamine hirsuta HOM05D002338 ORTHO05D006102 3.5e-08 64.7 205 24.4
FvH4_6g24910 Fragaria vesca HOM05D002338 ORTHO05D006102 4.6e-08 64.3 181 24.3
FAN02G0479 Fragaria x ananassa HOM05D002338 ORTHO05D006102 4.6e-08 64.3 181 24.3
FAN14G3958 Fragaria x ananassa HOM05D002338 ORTHO05D006102 4.6e-08 64.3 181 24.3
A01p03070 Brassica napus HOM05D002338 ORTHO05D006102 5.9e-08 63.9 217 23.0
Rhsim09G0087800 Rhododendron simsii HOM05D002338 ORTHO05D006102 5.9e-08 63.9 198 24.2
AT4G35540 Arabidopsis thaliana HOM05D002338 ORTHO05D006102 7.8e-08 63.5 204 23.5
Aa31LG6G12510 Aethionema arabicum HOM05D002338 ORTHO05D006102 1.0e-07 63.2 196 24.5
MBI18_g09632_MAGBIO Magnolia biondii HOM05D002338 ORTHO05D006102 1.3e-07 62.8 128 25.0
TPR.G22268 Trifolium pratense HOM05D002338 ORTHO05D006102 1.7e-07 62.4 182 24.2
AUR62031197 Chenopodium quinoa HOM05D002338 ORTHO05D006102 2.3e-07 62.0 172 22.1
BcaNung03635 Brassica carinata HOM05D002338 ORTHO05D006102 3.9e-07 61.2 219 22.8
Medtr2g031410 Medicago truncatula HOM05D002338 ORTHO05D006102 5.0e-07 60.8 181 22.7
Lalb_Chr18g0054471 Lupinus albus HOM05D002338 ORTHO05D006102 6.6e-07 60.5 187 21.4
AUR62036936 Chenopodium quinoa HOM05D002338 ORTHO05D006102 8.6e-07 60.1 173 24.3
Sabra04G0055900 Salix brachista HOM05D002338 ORTHO05D006102 1.1e-06 59.7 188 23.9
AL7G15620 Arabidopsis lyrata HOM05D002338 ORTHO05D006102 1.5e-06 59.3 204 22.5
AUR62027671 Chenopodium quinoa HOM05D002338 ORTHO05D006102 1.5e-06 59.3 172 21.5
Thhalv10027569m.g Eutrema salsugineum HOM05D002338 ORTHO05D006102 1.5e-06 59.3 202 23.3
Gorai.007G174700 Gossypium raimondii HOM05D002338 ORTHO05D006102 2.5e-06 58.5 191 20.9
Potri.004G084700 Populus trichocarpa HOM05D002338 ORTHO05D006102 2.5e-06 58.5 191 23.0
BcaB03g12416 Brassica carinata HOM05D002338 ORTHO05D006102 3.3e-06 58.2 175 24.6
CSS0015305 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 4.3e-06 57.8 181 26.0
Gohir.D11G163900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 4.3e-06 57.8 191 20.4
PSO675G9291 Papaver somniferum HOM05D002338 ORTHO05D006102 4.3e-06 57.8 101 25.7
CSS0032678 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 5.6e-06 57.4 181 26.0
Lj2A298G34 Lonicera japonica HOM05D002338 ORTHO05D006102 7.3e-06 57.0 97 27.8
PSO541G5199 Papaver somniferum HOM05D002338 ORTHO05D006102 7.3e-06 57.0 78 32.1
Duzib138G0048 Durio zibethinus HOM05D002338 ORTHO05D006102 9.5e-06 56.6 174 21.8
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 9.5e-06 56.6 188 23.4
SGA_v2.0_scaffold1G00039 Striga asiatica HOM05D002338 ORTHO05D006102 9.5e-06 56.6 200 22.5


User provided reference genes

Program Settings