Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G546 Micromonas commoda HOM05D006041 ORTHO05D007473 1.5e-195 686.4 467 100.0
PSO017G0247 Papaver somniferum HOM05D006041 ORTHO05D007473 3.2e-20 104.0 239 32.2
PSO478G4621 Papaver somniferum HOM05D006041 ORTHO05D007473 3.2e-20 104.0 239 32.2
Oeu016281.1 Olea europaea HOM05D006041 ORTHO05D007473 3.5e-19 100.5 255 31.0
ECA233G3443 Erigeron canadensis HOM05D006041 ORTHO05D007473 6.1e-19 99.8 240 30.4
SGA_v2.0_scaffold139G35400 Striga asiatica HOM05D006041 ORTHO05D007473 1.8e-18 98.2 273 30.0
HanXRQChr08g0212441 Helianthus annuus HOM05D006041 ORTHO05D007473 2.3e-18 97.8 266 28.6
MBI19_g21093_MAGBIO Magnolia biondii HOM05D006041 ORTHO05D007473 3.0e-18 97.4 346 30.3
Zm00001eb099250 Zea mays HOM05D006041 ORTHO05D007473 5.1e-18 96.7 274 32.8
MSTRG.2140 Avicennia marina HOM05D006041 ORTHO05D007473 6.7e-18 96.3 264 28.0
SalBow2G0340 Salvia bowleyana HOM05D006041 ORTHO05D007473 1.1e-17 95.5 262 29.4
THA.LOC104805081 Tarenaya hassleriana HOM05D006041 ORTHO05D007473 1.1e-17 95.5 257 31.5
CSS0021041 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 1.5e-17 95.1 266 28.6
CSS0021655 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 1.5e-17 95.1 266 28.6
Rhsim09G0037900 Rhododendron simsii HOM05D006041 ORTHO05D007473 1.5e-17 95.1 257 31.1
Nitab4.5_0000238g0060 Nicotiana tabacum HOM05D006041 ORTHO05D007473 2.5e-17 94.4 322 29.5
Sopen01g001440 Solanum pennellii HOM05D006041 ORTHO05D007473 2.5e-17 94.4 321 30.5
Haze_10912 Corylus avellana HOM05D006041 ORTHO05D007473 3.3e-17 94.0 319 29.8
Gorai.005G158800 Gossypium raimondii HOM05D006041 ORTHO05D007473 3.3e-17 94.0 323 29.1
Lsat_1_v5_gn_8_45641 Lactuca sativa HOM05D006041 ORTHO05D007473 3.3e-17 94.0 262 27.1
CBR_g3474 Chara braunii HOM05D006041 ORTHO05D007473 5.7e-17 93.2 369 26.8
DCAR_007323 Daucus carota HOM05D006041 ORTHO05D007473 7.4e-17 92.8 239 30.1
COL.COLO4_16567 Corchorus olitorius HOM05D006041 ORTHO05D007473 9.7e-17 92.4 322 30.1
Solyc01g005430.3 Solanum lycopersicum HOM05D006041 ORTHO05D007473 9.7e-17 92.4 348 29.3
unitig_27.g25310 Utricularia gibba HOM05D006041 ORTHO05D007473 9.7e-17 92.4 337 28.8
Cfa015002 Carpinus fangiana HOM05D006041 ORTHO05D007473 1.3e-16 92.0 347 28.8
Duzib268G1057 Durio zibethinus HOM05D006041 ORTHO05D007473 1.3e-16 92.0 239 30.5
Migut.E00465 Erythranthe guttata HOM05D006041 ORTHO05D007473 1.3e-16 92.0 263 28.1
Nitab4.5_0009602g0010 Nicotiana tabacum HOM05D006041 ORTHO05D007473 1.3e-16 92.0 322 28.9
Zm00001eb312180 Zea mays HOM05D006041 ORTHO05D007473 1.3e-16 92.0 272 32.4
Ah.03g145700 Amaranthus hybridus HOM05D006041 ORTHO05D007473 2.2e-16 91.3 263 30.0
vmacro00556 Vaccinium macrocarpon HOM05D006041 ORTHO05D007473 2.8e-16 90.9 321 30.5
Dinv26256 Davidia involucrata HOM05D006041 ORTHO05D007473 3.7e-16 90.5 262 27.9
Thhalv10004151m.g Eutrema salsugineum HOM05D006041 ORTHO05D007473 4.8e-16 90.1 239 30.5
EL10Ac6g15713 Beta vulgaris HOM05D006041 ORTHO05D007473 6.3e-16 89.7 328 28.0
Manes.15G133200 Manihot esculenta HOM05D006041 ORTHO05D007473 6.3e-16 89.7 336 28.3
TAR629G0174 Trochodendron aralioides HOM05D006041 ORTHO05D007473 6.3e-16 89.7 240 30.0
Sabra08G0102300 Salix brachista HOM05D006041 ORTHO05D007473 8.2e-16 89.4 260 27.7
Cpa.g.c27573.2 Carica papaya HOM05D006041 ORTHO05D007473 1.1e-15 89.0 263 28.9
Thecc.02G290600 Theobroma cacao HOM05D006041 ORTHO05D007473 1.1e-15 89.0 322 29.2
Aqoxy3G00037 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 1.4e-15 88.6 267 28.8
PGSC0003DMG400032118 Solanum tuberosum HOM05D006041 ORTHO05D007473 1.8e-15 88.2 322 29.5
AT2G01650 Arabidopsis thaliana HOM05D006041 ORTHO05D007473 2.4e-15 87.8 240 29.6
Cc11_g08020 Coffea canephora HOM05D006041 ORTHO05D007473 2.4e-15 87.8 262 28.6
PGR142G4228 Punica granatum HOM05D006041 ORTHO05D007473 2.4e-15 87.8 324 29.0
CARHR144220 Cardamine hirsuta HOM05D006041 ORTHO05D007473 4.1e-15 87.0 262 28.2
MD13G1029800 Malus domestica HOM05D006041 ORTHO05D007473 4.1e-15 87.0 340 27.4
Prupe.1G331600 Prunus persica HOM05D006041 ORTHO05D007473 4.1e-15 87.0 255 27.5
Lj6A740T67 Lonicera japonica HOM05D006041 ORTHO05D007473 5.3e-15 86.7 240 29.2
Peaxi162Scf00655g00023 Petunia axillaris HOM05D006041 ORTHO05D007473 6.9e-15 86.3 234 28.6
A06p44210 Brassica napus HOM05D006041 ORTHO05D007473 1.5e-14 85.1 239 29.3
CANSAT01G0691 Cannabis sativa HOM05D006041 ORTHO05D007473 1.5e-14 85.1 255 29.4
Nn4g24305 Nelumbo nucifera HOM05D006041 ORTHO05D007473 1.5e-14 85.1 265 27.5
BcaC06g34139 Brassica carinata HOM05D006041 ORTHO05D007473 2.0e-14 84.7 263 28.5
BolC7t43765H Brassica oleracea HOM05D006041 ORTHO05D007473 2.0e-14 84.7 263 28.5
Ciclev10015068m.g Citrus clementina HOM05D006041 ORTHO05D007473 2.0e-14 84.7 262 27.9
BcaC06g31287 Brassica carinata HOM05D006041 ORTHO05D007473 2.6e-14 84.3 242 30.2
Duzib251G0740 Durio zibethinus HOM05D006041 ORTHO05D007473 3.4e-14 84.0 242 28.9
C07p32270 Brassica napus HOM05D006041 ORTHO05D007473 4.5e-14 83.6 263 28.5
Lalb_Chr05g0222281 Lupinus albus HOM05D006041 ORTHO05D007473 4.5e-14 83.6 240 28.8
TPR.G32714 Trifolium pratense HOM05D006041 ORTHO05D007473 5.9e-14 83.2 320 27.2
Carub.0005s0060 Capsella rubella HOM05D006041 ORTHO05D007473 7.7e-14 82.8 266 27.8
AL5G10750 Arabidopsis lyrata HOM05D006041 ORTHO05D007473 1.0e-13 82.4 240 29.6
MELO3C005281.2 Cucumis melo HOM05D006041 ORTHO05D007473 1.0e-13 82.4 269 29.0
MD16G1020600 Malus domestica HOM05D006041 ORTHO05D007473 1.0e-13 82.4 321 28.0
arahy.Tifrunner.gnm1.ann1.IVEQ23 Arachis hypogaea HOM05D006041 ORTHO05D007473 1.3e-13 82.0 336 29.8
Eucgr.G02114 Eucalyptus grandis HOM05D006041 ORTHO05D007473 1.3e-13 82.0 261 29.1
AUR62003915 Chenopodium quinoa HOM05D006041 ORTHO05D007473 2.2e-13 81.3 328 28.4
CsaV3_5G028000 Cucumis sativus L. HOM05D006041 ORTHO05D007473 2.2e-13 81.3 355 29.0
Medtr8g104930 Medicago truncatula HOM05D006041 ORTHO05D007473 2.2e-13 81.3 321 27.4
ATR0753G012 Amborella trichopoda HOM05D006041 ORTHO05D007473 3.8e-13 80.5 253 30.4
arahy.Tifrunner.gnm1.ann1.BAL5EB Arachis hypogaea HOM05D006041 ORTHO05D007473 3.8e-13 80.5 336 29.2
CAN.G1130.10 Capsicum annuum HOM05D006041 ORTHO05D007473 3.8e-13 80.5 335 28.1
TWI74G1002 Tripterygium wilfordii HOM05D006041 ORTHO05D007473 3.8e-13 80.5 243 28.4
Gorai.002G173400 Gossypium raimondii HOM05D006041 ORTHO05D007473 5.0e-13 80.1 320 26.2
Psat7g009240 Pisum sativum HOM05D006041 ORTHO05D007473 5.0e-13 80.1 334 27.2
Haze_10913 Corylus avellana HOM05D006041 ORTHO05D007473 6.5e-13 79.7 345 27.5
Glyma.05G235400 Glycine max HOM05D006041 ORTHO05D007473 6.5e-13 79.7 321 28.3
VMungo0251G2799 Vigna mungo HOM05D006041 ORTHO05D007473 6.5e-13 79.7 241 30.3
FvH4_4g33820 Fragaria vesca HOM05D006041 ORTHO05D007473 8.5e-13 79.3 330 27.0
Sp2g13100 Schrenkiella parvula HOM05D006041 ORTHO05D007473 8.5e-13 79.3 267 27.0
Sed0015632 Sechium edule HOM05D006041 ORTHO05D007473 8.5e-13 79.3 242 29.3
Gohir.D01G141100 Gossypium hirsutum HOM05D006041 ORTHO05D007473 1.1e-12 79.0 320 26.2
Gohir.A03G117900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 1.4e-12 78.6 226 28.3
Ca_17289_v3 Cicer arietinum L. HOM05D006041 ORTHO05D007473 3.2e-12 77.4 265 26.0
Dinv18641 Davidia involucrata HOM05D006041 ORTHO05D007473 4.2e-12 77.0 247 26.3
Lj4g0006027 Lotus japonicus HOM05D006041 ORTHO05D007473 4.2e-12 77.0 349 27.5
RcHm_v2.0_Chr4g0443331 Rosa chinensis HOM05D006041 ORTHO05D007473 4.2e-12 77.0 267 26.2
Sc03g0001760 Simmondsia chinensis HOM05D006041 ORTHO05D007473 7.2e-12 76.3 262 25.6
Gohir.D02G141500 Gossypium hirsutum HOM05D006041 ORTHO05D007473 9.4e-12 75.9 227 27.8
Aa31LG2G8250 Aethionema arabicum HOM05D006041 ORTHO05D007473 1.2e-11 75.5 261 26.8
Potri.008G133700 Populus trichocarpa HOM05D006041 ORTHO05D007473 1.6e-11 75.1 248 27.0
TAR371G0590 Trochodendron aralioides HOM05D006041 ORTHO05D007473 1.6e-11 75.1 323 28.5
Atru.chr11.510 Acer truncatum HOM05D006041 ORTHO05D007473 2.7e-11 74.3 244 26.6
BraA06t27296Z Brassica rapa HOM05D006041 ORTHO05D007473 2.7e-11 74.3 239 28.5
FAN12G3784 Fragaria x ananassa HOM05D006041 ORTHO05D007473 3.6e-11 73.9 258 26.7
Glyma.08G042900 Glycine max HOM05D006041 ORTHO05D007473 1.4e-10 72.0 321 28.0
CDE07G0862 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 1.8e-10 71.6 322 28.6
Phvul.002G319700 Phaseolus vulgaris HOM05D006041 ORTHO05D007473 3.0e-10 70.9 321 28.3
SGA_v2.0_scaffold151G36726 Striga asiatica HOM05D006041 ORTHO05D007473 3.0e-10 70.9 323 25.1
CiPaw.05G190300 Carya illinoinensis HOM05D006041 ORTHO05D007473 5.1e-10 70.1 227 27.8
Manes.17G082400 Manihot esculenta HOM05D006041 ORTHO05D007473 1.1e-09 68.9 239 27.2
Cre02.g143547 Chlamydomonas reinhardtii HOM05D048383 ORTHO05D044104 1.5e-09 68.6 375 26.1
Sed0013468 Sechium edule HOM05D006041 ORTHO05D007473 2.0e-09 68.2 250 26.4
Gohir.A01G147900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 2.5e-09 67.8 320 25.0
SEGI_21307 Sequoiadendron giganteum HOM05D006041 ORTHO05D007473 5.7e-09 66.6 233 27.5
FAN17G0347 Fragaria x ananassa HOM05D006041 ORTHO05D007473 7.4e-09 66.2 332 25.6
Os09g0401600 Oryza sativa ssp. japonica HOM05D006041 ORTHO05D007473 7.4e-09 66.2 120 34.2
ClCG01G006460 Citrullus lanatus HOM05D006041 ORTHO05D007473 6.3e-08 63.2 270 25.9
SGA_v2.0_scaffold151G36757 Striga asiatica HOM05D006041 ORTHO05D007473 6.3e-08 63.2 209 28.2
FAN22G1094 Fragaria x ananassa HOM05D006041 ORTHO05D007473 1.4e-07 62.0 341 25.5
Actinidia34032 Actinidia chinensis HOM05D006041 ORTHO05D007473 9.1e-07 59.3 72 38.9
QL03p034952 Quercus lobata HOM05D006041 ORTHO05D007473 9.1e-07 59.3 268 25.4
Hma1.2p1_0089F.1_g045430 Hydrangea macrophylla HOM05D006041 ORTHO05D007473 2.6e-06 57.8 85 36.5
Mapoly0081s0058 Marchantia polymorpha HOM05D006041 ORTHO05D007473 3.4e-06 57.4 238 25.6


User provided reference genes

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