Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G545 Micromonas commoda HOM05D006189 ORTHO05D007765 4.6e-138 494.6 254 100.0
AagrBONN_evm.TU.Sc2ySwM_228.1434 Anthoceros agrestis HOM05D006189 ORTHO05D007765 1.1e-67 260.8 253 54.9
MD10G1243100 Malus domestica HOM05D006189 ORTHO05D007765 3.4e-64 249.2 256 50.4
PSO541G1785 Papaver somniferum HOM05D006189 ORTHO05D007765 3.4e-64 249.2 256 51.6
PSO675G7004 Papaver somniferum HOM05D006189 ORTHO05D007765 3.4e-64 249.2 256 51.6
A01p12170 Brassica napus HOM05D006189 ORTHO05D007765 4.4e-64 248.8 256 51.6
SMO116G0118 Selaginella moellendorffii HOM05D006189 ORTHO05D007765 1.7e-63 246.9 253 52.6
Mapoly0158s0008 Marchantia polymorpha HOM05D006189 ORTHO05D007765 2.2e-63 246.5 253 51.4
Carub.0007s2069 Capsella rubella HOM05D006189 ORTHO05D007765 4.9e-63 245.4 256 51.6
SEGI_07893 Sequoiadendron giganteum HOM05D006189 ORTHO05D007765 8.3e-63 244.6 254 51.6
AT4G20760 Arabidopsis thaliana HOM05D006189 ORTHO05D007765 1.1e-62 244.2 256 50.8
BcaC09g51315 Brassica carinata HOM05D006189 ORTHO05D007765 1.8e-62 243.4 256 50.8
C01p14490 Brassica napus HOM05D006189 ORTHO05D007765 1.8e-62 243.4 256 50.8
BolC1t01404H Brassica oleracea HOM05D006189 ORTHO05D007765 1.8e-62 243.4 256 50.8
Sp7g18830 Schrenkiella parvula HOM05D006189 ORTHO05D007765 2.4e-62 243.0 256 50.8
BraA01t01159Z Brassica rapa HOM05D006189 ORTHO05D007765 4.1e-62 242.3 256 50.4
BcaNung04155 Brassica carinata HOM05D006189 ORTHO05D007765 5.4e-62 241.9 256 50.8
Duzib235G1073 Durio zibethinus HOM05D006189 ORTHO05D007765 7.0e-62 241.5 256 50.4
AL7G33390 Arabidopsis lyrata HOM05D006189 ORTHO05D007765 9.2e-62 241.1 256 50.8
Pp3c10_7720 Physcomitrium patens HOM05D006189 ORTHO05D007765 9.2e-62 241.1 254 50.8
Thhalv10025851m.g Eutrema salsugineum HOM05D006189 ORTHO05D007765 2.0e-61 240.0 256 50.4
FAN16G1953 Fragaria x ananassa HOM05D006189 ORTHO05D007765 2.0e-61 240.0 256 49.2
Prupe.4G101000 Prunus persica HOM05D006189 ORTHO05D007765 2.0e-61 240.0 258 48.1
PGSC0003DMG400028033 Solanum tuberosum HOM05D006189 ORTHO05D007765 2.0e-61 240.0 256 50.8
FvH4_3g11150 Fragaria vesca HOM05D006189 ORTHO05D007765 2.7e-61 239.6 256 48.8
FAN21G1916 Fragaria x ananassa HOM05D006189 ORTHO05D007765 2.7e-61 239.6 256 49.2
ECA234G0756 Erigeron canadensis HOM05D006189 ORTHO05D007765 3.5e-61 239.2 256 50.0
Nn7g37778 Nelumbo nucifera HOM05D006189 ORTHO05D007765 5.9e-61 238.4 253 50.6
Sopen02g006700 Solanum pennellii HOM05D006189 ORTHO05D007765 5.9e-61 238.4 256 50.4
Lalb_Chr18g0058331 Lupinus albus HOM05D006189 ORTHO05D007765 1.0e-60 237.7 257 49.8
Os12g0609500 Oryza sativa ssp. japonica HOM05D006189 ORTHO05D007765 1.0e-60 237.7 253 49.8
Sc24g0002570 Simmondsia chinensis HOM05D006189 ORTHO05D007765 1.0e-60 237.7 253 49.8
Solyc02g023990.3 Solanum lycopersicum HOM05D006189 ORTHO05D007765 1.0e-60 237.7 256 50.0
COL.COLO4_26883 Corchorus olitorius HOM05D006189 ORTHO05D007765 1.7e-60 236.9 256 48.8
Aa31LG6G2850 Aethionema arabicum HOM05D006189 ORTHO05D007765 2.3e-60 236.5 256 49.6
arahy.Tifrunner.gnm1.ann1.HZ123V Arachis hypogaea HOM05D006189 ORTHO05D007765 2.9e-60 236.1 257 49.4
MELO3C002872.2 Cucumis melo HOM05D006189 ORTHO05D007765 2.9e-60 236.1 256 48.4
CAN.G565.1 Capsicum annuum HOM05D006189 ORTHO05D007765 3.8e-60 235.7 256 49.6
RcHm_v2.0_Chr5g0018051 Rosa chinensis HOM05D006189 ORTHO05D007765 5.0e-60 235.3 256 48.0
Sed0000978 Sechium edule HOM05D006189 ORTHO05D007765 5.0e-60 235.3 256 48.8
AUR62030247 Chenopodium quinoa HOM05D006189 ORTHO05D007765 8.6e-60 234.6 237 50.6
DCAR_005641 Daucus carota HOM05D006189 ORTHO05D007765 8.6e-60 234.6 236 52.1
FAN25G1707 Fragaria x ananassa HOM05D006189 ORTHO05D007765 8.6e-60 234.6 256 48.4
CiPaw.09G147800 Carya illinoinensis HOM05D006189 ORTHO05D007765 1.1e-59 234.2 256 48.8
Nitab4.5_0010673g0010 Nicotiana tabacum HOM05D006189 ORTHO05D007765 1.1e-59 234.2 256 48.4
Ciclev10016184m.g Citrus clementina HOM05D006189 ORTHO05D007765 1.5e-59 233.8 252 49.6
Gohir.D02G105200 Gossypium hirsutum HOM05D006189 ORTHO05D007765 1.9e-59 233.4 237 51.1
GSVIVG01021771001 Vitis vinifera HOM05D006189 ORTHO05D007765 1.9e-59 233.4 256 48.4
Atru.chr10.686 Acer truncatum HOM05D006189 ORTHO05D007765 2.5e-59 233.0 256 48.8
AUR62027598 Chenopodium quinoa HOM05D006189 ORTHO05D007765 2.5e-59 233.0 237 50.2
Nitab4.5_0002819g0010 Nicotiana tabacum HOM05D006189 ORTHO05D007765 2.5e-59 233.0 256 48.8
TPR.G8020 Trifolium pratense HOM05D006189 ORTHO05D007765 4.3e-59 232.3 257 49.4
TWI38G1238 Tripterygium wilfordii HOM05D006189 ORTHO05D007765 4.3e-59 232.3 253 49.0
Cpa.g.c30210.1 Carica papaya HOM05D006189 ORTHO05D007765 7.3e-59 231.5 256 48.0
ClCG03G008560 Citrullus lanatus HOM05D006189 ORTHO05D007765 7.3e-59 231.5 256 48.0
Lj6g0027485 Lotus japonicus HOM05D006189 ORTHO05D007765 7.3e-59 231.5 253 47.4
ATR0763G139 Amborella trichopoda HOM05D006189 ORTHO05D007765 9.5e-59 231.1 254 48.0
EL10Ac9g22332 Beta vulgaris HOM05D006189 ORTHO05D007765 9.5e-59 231.1 256 48.4
TAR626G0344 Trochodendron aralioides HOM05D006189 ORTHO05D007765 9.5e-59 231.1 256 48.0
Glyma.15G135500 Glycine max HOM05D006189 ORTHO05D007765 1.6e-58 230.3 257 48.2
Gorai.005G119400 Gossypium raimondii HOM05D006189 ORTHO05D007765 1.6e-58 230.3 233 51.1
arahy.Tifrunner.gnm1.ann1.4Q5DUA Arachis hypogaea HOM05D006189 ORTHO05D007765 2.1e-58 229.9 254 48.4
MBI18_g27139_MAGBIO Magnolia biondii HOM05D006189 ORTHO05D007765 2.1e-58 229.9 252 48.8
Manes.14G126200 Manihot esculenta HOM05D006189 ORTHO05D007765 3.6e-58 229.2 256 47.3
vmacro03465 Vaccinium macrocarpon HOM05D006189 ORTHO05D007765 3.6e-58 229.2 253 47.0
Ca_00927_v3 Cicer arietinum L. HOM05D006189 ORTHO05D007765 4.7e-58 228.8 256 47.7
Cc09_g07340 Coffea canephora HOM05D006189 ORTHO05D007765 6.1e-58 228.4 256 48.0
Oeu063153.2 Olea europaea HOM05D006189 ORTHO05D007765 6.1e-58 228.4 256 48.8
Actinidia29243 Actinidia chinensis HOM05D006189 ORTHO05D007765 8.0e-58 228.0 256 47.3
Lsat_1_v5_gn_5_148401 Lactuca sativa HOM05D006189 ORTHO05D007765 8.0e-58 228.0 235 51.1
Phvul.006G123300 Phaseolus vulgaris HOM05D006189 ORTHO05D007765 8.0e-58 228.0 254 46.5
Glyma.09G029700 Glycine max HOM05D006189 ORTHO05D007765 1.0e-57 227.6 257 47.5
QL04p073052 Quercus lobata HOM05D006189 ORTHO05D007765 1.0e-57 227.6 255 47.1
Medtr2g031990 Medicago truncatula HOM05D006189 ORTHO05D007765 1.4e-57 227.3 253 47.8
VMungo0540G1817 Vigna mungo HOM05D006189 ORTHO05D007765 1.4e-57 227.3 254 46.9
Migut.M01928 Erythranthe guttata HOM05D006189 ORTHO05D007765 1.8e-57 226.9 256 47.7
Hund17667 Selenicereus undatus HOM05D006189 ORTHO05D007765 1.8e-57 226.9 255 48.2
HanXRQChr10g0296271 Helianthus annuus HOM05D006189 ORTHO05D007765 2.3e-57 226.5 258 48.4
Potri.011G157300 Populus trichocarpa HOM05D006189 ORTHO05D007765 2.3e-57 226.5 256 46.9
Rhsim13G0125300 Rhododendron simsii HOM05D006189 ORTHO05D007765 2.3e-57 226.5 256 46.9
Eucgr.D01017 Eucalyptus grandis HOM05D006189 ORTHO05D007765 4.0e-57 225.7 256 46.1
Dinv06442 Davidia involucrata HOM05D006189 ORTHO05D007765 8.9e-57 224.6 256 47.3
Thecc.06G008600 Theobroma cacao HOM05D006189 ORTHO05D007765 1.5e-56 223.8 236 48.3
Cfa000769 Carpinus fangiana HOM05D006189 ORTHO05D007765 2.6e-56 223.0 256 47.3
Haze_05946 Corylus avellana HOM05D006189 ORTHO05D007765 2.6e-56 223.0 256 47.3
MSTRG.16306 Avicennia marina HOM05D006189 ORTHO05D007765 2.2e-55 219.9 256 47.3
CSS0031891 Camellia sinensis var. sinensis HOM05D006189 ORTHO05D007765 2.2e-55 219.9 256 45.7
SalBow8G0058 Salvia bowleyana HOM05D006189 ORTHO05D007765 4.9e-55 218.8 256 47.3
SalBow8G0354 Salvia bowleyana HOM05D006189 ORTHO05D007765 4.9e-55 218.8 256 47.3
SGA_v2.0_scaffold1G00293 Striga asiatica HOM05D006189 ORTHO05D007765 1.6e-53 213.8 244 46.3
Gohir.A03G088500 Gossypium hirsutum HOM05D006189 ORTHO05D007765 4.3e-51 205.7 242 47.1
CANSAT35G1316 Cannabis sativa HOM05D006189 ORTHO05D007765 3.6e-50 202.6 256 44.9
Sabra11G0142800 Salix brachista HOM05D006189 ORTHO05D007765 2.3e-49 199.9 321 38.3
Hma1.2p1_1192F.1_g265520 Hydrangea macrophylla HOM05D006189 ORTHO05D007765 1.2e-48 197.6 232 46.1
PSO541G6221 Papaver somniferum HOM05D006189 ORTHO05D007765 7.5e-48 194.9 227 46.3
Lj2A337T31 Lonicera japonica HOM05D006189 ORTHO05D007765 9.8e-48 194.5 296 39.5
CDE02G4463 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 1.7e-47 193.7 253 43.1
Psat1g164320 Pisum sativum HOM05D006189 ORTHO05D007765 3.7e-47 192.6 192 50.5
arahy.Tifrunner.gnm1.ann1.5RXD5Y Arachis hypogaea HOM05D006189 ORTHO05D007765 4.9e-47 192.2 250 43.2
Ah.14g085060 Amaranthus hybridus HOM05D006189 ORTHO05D007765 1.4e-46 190.7 253 42.3
CsaV3_1G037630 Cucumis sativus L. HOM05D006189 ORTHO05D007765 4.1e-46 189.1 236 44.5
CARHR227300 Cardamine hirsuta HOM05D006189 ORTHO05D007765 5.4e-46 188.7 164 59.8
Aqoxy1G01513 Aquilegia oxysepala HOM05D006189 ORTHO05D007765 2.7e-45 186.4 176 53.4
HPP92_015693 Vanilla planifolia HOM05D006189 ORTHO05D007765 2.3e-44 183.3 152 62.5
TPR.G21393 Trifolium pratense HOM05D006189 ORTHO05D007765 1.1e-43 181.0 191 47.1
PRCOL_00006144 Prasinoderma coloniale HOM05D006189 ORTHO05D007765 6.2e-42 175.3 248 43.5
Hma1.2p1_1192F.1_g265540 Hydrangea macrophylla HOM05D006189 ORTHO05D007765 1.2e-37 161.0 111 66.7
Peaxi162Scf00395g00112 Petunia axillaris HOM05D006189 ORTHO05D007765 5.6e-35 152.1 254 35.0
Zm00001eb031410 Zea mays HOM05D006189 ORTHO05D007765 1.9e-30 137.1 174 46.0
CDE02G2479 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 1.0e-28 131.3 132 52.3
arahy.Tifrunner.gnm1.ann1.FHXA43 Arachis hypogaea HOM05D006189 ORTHO05D007765 8.9e-25 118.2 253 30.4
MCO09G279 Micromonas commoda HOM05D006189 ORTHO05D007765 1.6e-18 97.4 193 37.8
MCO08G164 Micromonas commoda HOM05D006189 ORTHO05D007765 2.7e-13 80.1 252 28.2
MCO02G010 Micromonas commoda HOM05D006189 ORTHO05D007765 1.0e-12 78.2 208 31.2
Cfa026914 Carpinus fangiana HOM05D000326 ORTHO05D125651 1.4e-09 67.8 149 33.6
PRCOL_00004206 Prasinoderma coloniale HOM05D006189 ORTHO05D007765 1.4e-09 67.8 300 27.0
Cfa027186 Carpinus fangiana HOM05D001208 ORTHO05D002766 4.5e-08 62.8 156 30.1
MCO03G468 Micromonas commoda HOM05D006189 ORTHO05D007765 9.9e-08 61.6 232 27.2
unitig_92.g28182 Utricularia gibba HOM05D006189 ORTHO05D007765 1.3e-07 61.2 107 35.5
Sopen12g023390 Solanum pennellii HOM05D001208 ORTHO05D001593 2.9e-07 60.1 245 26.9
Os07g0691600 Oryza sativa ssp. japonica HOM05D000182 ORTHO05D000112 4.9e-07 59.3 159 35.8
Solyc12g045030.2 Solanum lycopersicum HOM05D001208 ORTHO05D001593 4.9e-07 59.3 245 26.9
THA.LOC104806573 Tarenaya hassleriana HOM05D001208 ORTHO05D001593 4.9e-07 59.3 244 27.0
QL04p073045 Quercus lobata HOM05D006189 ORTHO05D007765 1.4e-06 57.8 33 81.8
HPP92_015692 Vanilla planifolia HOM05D006189 ORTHO05D007765 2.4e-06 57.0 92 33.7
Zm00001eb063410 Zea mays HOM05D000182 ORTHO05D000112 5.5e-06 55.8 210 32.4
PGSC0003DMG400014095 Solanum tuberosum HOM05D001208 ORTHO05D001593 7.1e-06 55.5 245 26.5
Ca_29334_v3 Cicer arietinum L. HOM05D000182 ORTHO05D000112 9.3e-06 55.1 244 24.6
ECA248G1442 Erigeron canadensis HOM05D001208 ORTHO05D001593 9.3e-06 55.1 226 27.9


User provided reference genes

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