Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 5.1e-154 547.7 284 100.0
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 5.4e-55 218.8 170 60.6
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 8.1e-51 204.9 230 47.4
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 1.4e-47 194.1 249 46.6
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 9.0e-42 174.9 203 50.2
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 2.9e-40 169.9 188 48.4
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 1.6e-38 164.1 180 49.4
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 4.3e-36 156.0 233 43.3
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 8.2e-35 151.8 152 49.3
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 1.8e-34 150.6 229 41.9
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 1.2e-33 147.9 188 43.1
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 2.6e-33 146.7 147 49.0
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 2.6e-33 146.7 174 43.7
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 2.6e-33 146.7 196 42.9
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 3.4e-33 146.4 197 42.1
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 5.9e-33 145.6 188 42.0
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 5.9e-33 145.6 143 50.3
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 7.6e-33 145.2 190 40.0
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 7.6e-33 145.2 152 48.7
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 1.0e-32 144.8 200 43.0
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 1.3e-32 144.4 151 47.0
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 1.3e-32 144.4 212 41.5
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 1.7e-32 144.1 167 43.7
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 2.2e-32 143.7 146 47.3
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 2.2e-32 143.7 147 49.7
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 2.9e-32 143.3 190 41.1
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 3.8e-32 142.9 172 43.6
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 3.8e-32 142.9 167 43.1
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 3.8e-32 142.9 167 43.1
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 3.8e-32 142.9 167 43.1
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 3.8e-32 142.9 187 43.3
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 3.8e-32 142.9 167 43.1
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 5.0e-32 142.5 176 43.8
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 5.0e-32 142.5 134 50.7
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 5.0e-32 142.5 186 41.4
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 5.0e-32 142.5 194 41.8
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 5.0e-32 142.5 195 41.0
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 6.5e-32 142.1 153 45.8
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 6.5e-32 142.1 177 41.8
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 6.5e-32 142.1 146 47.9
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 6.5e-32 142.1 188 41.0
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 8.5e-32 141.7 134 50.7
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 8.5e-32 141.7 169 42.6
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 8.5e-32 141.7 191 40.8
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 1.1e-31 141.4 169 42.6
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 1.1e-31 141.4 153 45.1
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 1.1e-31 141.4 211 38.9
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 1.1e-31 141.4 168 44.0
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 1.1e-31 141.4 195 41.0
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 1.9e-31 140.6 155 46.5
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 1.9e-31 140.6 169 42.6
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 1.9e-31 140.6 172 45.3
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 1.9e-31 140.6 173 43.4
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 1.9e-31 140.6 173 43.4
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 2.5e-31 140.2 142 49.3
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 2.5e-31 140.2 159 42.8
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 3.2e-31 139.8 147 49.7
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 3.2e-31 139.8 177 42.4
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 4.2e-31 139.4 151 45.0
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 4.2e-31 139.4 180 41.1
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 4.2e-31 139.4 186 42.5
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 5.5e-31 139.0 146 47.3
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 5.5e-31 139.0 146 47.3
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 7.2e-31 138.7 165 43.0
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 7.2e-31 138.7 147 49.7
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 7.2e-31 138.7 184 42.4
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 7.2e-31 138.7 147 46.3
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 9.3e-31 138.3 193 40.9
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 9.3e-31 138.3 192 41.7
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 9.3e-31 138.3 166 42.2
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 1.2e-30 137.9 185 41.6
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 1.2e-30 137.9 134 50.7
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 1.2e-30 137.9 180 41.7
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 1.6e-30 137.5 189 41.3
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 1.6e-30 137.5 189 41.3
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 1.6e-30 137.5 159 44.0
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 1.6e-30 137.5 147 44.9
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 1.6e-30 137.5 194 38.7
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 1.6e-30 137.5 175 42.3
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 2.1e-30 137.1 147 45.6
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 2.1e-30 137.1 166 42.2
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 2.1e-30 137.1 172 41.9
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 2.7e-30 136.7 188 40.4
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 2.7e-30 136.7 188 40.4
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 2.7e-30 136.7 184 41.8
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 2.7e-30 136.7 192 41.7
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 3.6e-30 136.3 183 41.5
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 4.6e-30 136.0 186 41.9
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 4.6e-30 136.0 189 40.7
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 6.1e-30 135.6 156 44.2
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 7.9e-30 135.2 177 42.4
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 7.9e-30 135.2 180 41.1
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 7.9e-30 135.2 160 45.6
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 1.0e-29 134.8 176 43.2
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 1.0e-29 134.8 156 44.2
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 1.0e-29 134.8 185 43.8
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 1.3e-29 134.4 215 40.0
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 1.3e-29 134.4 164 43.9
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 1.8e-29 134.0 187 40.1
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.8e-29 134.0 176 42.6
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 3.9e-29 132.9 188 39.4
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 5.1e-29 132.5 210 41.0
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 6.7e-29 132.1 183 41.0
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 8.7e-29 131.7 153 45.1
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.1e-28 131.3 176 42.6
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 1.1e-28 131.3 145 46.9
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 3.3e-28 129.8 142 46.5
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 4.3e-28 129.4 151 44.4
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 5.7e-28 129.0 179 39.1
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 7.4e-28 128.6 167 41.3
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 1.3e-27 127.9 205 37.1
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 2.8e-27 126.7 171 40.4
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 4.8e-27 125.9 179 39.1
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 1.4e-26 124.4 189 39.7
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 2.4e-26 123.6 226 36.7
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 9.0e-26 121.7 143 45.5
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 2.0e-20 104.0 145 39.3
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 2.2e-19 100.5 159 37.7
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 4.8e-19 99.4 115 41.7
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 1.6e-14 84.3 153 34.0
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 3.5e-09 66.6 106 38.7
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 4.5e-09 66.2 91 44.0


User provided reference genes

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