Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G502 Micromonas commoda HOM05D006640 ORTHO05D008078 2.7e-104 382.1 204 100.0
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 1.8e-15 87.0 176 27.3
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 2.3e-15 86.7 179 27.4
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 2.6e-14 83.2 188 28.2
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 4.4e-14 82.4 189 29.6
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 7.5e-14 81.6 190 29.5
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 3.7e-13 79.3 181 24.3
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 8.2e-13 78.2 190 27.4
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 2.4e-12 76.6 191 26.2
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 2.4e-12 76.6 190 27.4
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 9.1e-12 74.7 188 28.2
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 1.6e-11 73.9 189 27.5
CBR_g30123 Chara braunii HOM05D006640 ORTHO05D008078 1.6e-11 73.9 187 25.7
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 1.6e-11 73.9 190 25.3
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 1.6e-11 73.9 179 30.7
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 1.6e-11 73.9 192 27.1
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 1.6e-11 73.9 153 27.5
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 2.7e-11 73.2 189 26.5
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 4.5e-11 72.4 190 26.8
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 5.9e-11 72.0 181 26.5
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.3e-10 70.9 190 24.2
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 6.5e-10 68.6 192 26.0
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 8.5e-10 68.2 192 25.0
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 3.2e-09 66.2 189 24.3
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 5.5e-09 65.5 189 24.9
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 5.5e-09 65.5 189 25.4
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 9.4e-09 64.7 189 24.9
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 1.2e-08 64.3 190 23.2
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis HOM05D006640 ORTHO05D008078 1.6e-08 63.9 146 28.8
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 3.0e-07 59.7 189 23.8
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 8.8e-07 58.2 121 27.3
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 3.4e-06 56.2 178 23.0


User provided reference genes

Program Settings