Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G395 Micromonas commoda HOM05D001664 ORTHO05D007065 6.9e-87 323.9 163 100.0
Cre12.g542350 Chlamydomonas reinhardtii HOM05D001664 ORTHO05D007065 2.0e-17 93.2 100 39.0
MCO10G370 Micromonas commoda HOM05D001664 ORTHO05D001622 2.2e-16 89.7 144 34.0
Cre16.g649650 Chlamydomonas reinhardtii HOM05D006158 ORTHO05D000158 3.0e-13 79.3 111 36.9
MCO11G574 Micromonas commoda HOM05D001664 ORTHO05D007065 8.9e-10 67.8 86 38.4
Potri.004G156200 Populus trichocarpa HOM05D006158 ORTHO05D007065 5.4e-07 58.5 91 31.9
Manes.11G086500 Manihot esculenta HOM05D006158 ORTHO05D007065 7.1e-07 58.2 91 34.1
Sabra05G0012500 Salix brachista HOM05D000483 ORTHO05D000158 7.1e-07 58.2 84 36.9
CBR_g3955 Chara braunii HOM05D000483 ORTHO05D000158 9.2e-07 57.8 111 28.8
Sopen01g051900 Solanum pennellii HOM05D006158 ORTHO05D007065 9.2e-07 57.8 85 35.3
CAN.G1412.17 Capsicum annuum HOM05D006158 ORTHO05D007065 2.1e-06 56.6 85 34.1
MD12G1206900 Malus domestica HOM05D000483 ORTHO05D000158 2.1e-06 56.6 81 33.3
Sabra04G0104200 Salix brachista HOM05D006158 ORTHO05D007065 2.1e-06 56.6 91 29.7
Solyc01g109710.3 Solanum lycopersicum HOM05D006158 ORTHO05D007065 2.1e-06 56.6 85 34.1
Sopen01g043890 Solanum pennellii HOM05D000483 ORTHO05D000158 2.7e-06 56.2 88 33.0
Solyc01g100370.3 Solanum lycopersicum HOM05D000483 ORTHO05D000158 3.5e-06 55.8 88 33.0
CBR_g18963 Chara braunii HOM05D000483 ORTHO05D000158 6.0e-06 55.1 111 28.8
PGSC0003DMG400002804 Solanum tuberosum HOM05D000483 ORTHO05D000158 6.0e-06 55.1 88 33.0
Zm00001eb340280 Zea mays HOM05D000483 ORTHO05D000158 6.0e-06 55.1 92 33.7
Sed0018553 Sechium edule HOM05D000483 ORTHO05D000158 7.8e-06 54.7 92 35.9
unitig_46.g18368 Utricularia gibba HOM05D000483 ORTHO05D000158 7.8e-06 54.7 84 29.8


User provided reference genes

Program Settings