Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G361 Micromonas commoda HOM05D007622 ORTHO05D009409 6.7e-81 303.9 149 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 4.6e-13 78.6 104 41.3
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 3.9e-12 75.5 102 42.2
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 6.7e-12 74.7 78 48.7
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 4.3e-11 72.0 82 45.1
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 4.8e-10 68.6 84 42.9
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 4.0e-09 65.5 78 41.0
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 5.3e-09 65.1 110 34.5
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 6.9e-09 64.7 100 36.0
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.2e-08 63.9 100 37.0
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 1.2e-08 63.9 100 37.0
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.5e-08 63.5 100 36.0
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 3.4e-08 62.4 81 38.3
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 3.4e-08 62.4 104 33.7
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.3e-07 60.5 77 40.3
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 1.3e-07 60.5 92 35.9
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 1.7e-07 60.1 77 39.0
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 1.7e-07 60.1 77 39.0
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 1.7e-07 60.1 77 39.0
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 1.7e-07 60.1 77 39.0
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 1.7e-07 60.1 77 39.0
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 1.7e-07 60.1 77 39.0
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 1.7e-07 60.1 77 39.0
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 1.7e-07 60.1 93 36.6
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 2.2e-07 59.7 77 39.0
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 2.2e-07 59.7 77 39.0
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 2.2e-07 59.7 106 33.0
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 2.2e-07 59.7 78 38.5
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 2.9e-07 59.3 93 35.5
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 3.8e-07 58.9 77 39.0
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 4.9e-07 58.5 101 31.7
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 4.9e-07 58.5 101 31.7
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 4.9e-07 58.5 78 35.9
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 4.9e-07 58.5 78 35.9
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 4.9e-07 58.5 78 34.6
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 6.4e-07 58.2 78 35.9
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 6.4e-07 58.2 93 37.6
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 6.4e-07 58.2 78 34.6
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 1.1e-06 57.4 117 29.9
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 1.9e-06 56.6 78 34.6


User provided reference genes

Program Settings