Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 6.9e-116 420.6 208 100.0
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 4.3e-25 119.0 207 38.2
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 5.3e-23 112.1 225 34.7
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 1.5e-22 110.5 229 35.8
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 2.6e-22 109.8 225 35.1
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 2.6e-22 109.8 230 36.1
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 3.4e-22 109.4 230 35.2
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 5.8e-22 108.6 226 34.1
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 9.9e-22 107.8 231 34.6
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 9.9e-22 107.8 231 34.2
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 9.9e-22 107.8 226 34.5
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 1.3e-21 107.5 237 33.3
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 1.3e-21 107.5 221 37.1
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 1.7e-21 107.1 226 34.5
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 1.7e-21 107.1 229 34.1
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 2.2e-21 106.7 230 35.2
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 4.9e-21 105.5 230 34.8
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 4.9e-21 105.5 231 33.3
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 1.1e-20 104.4 225 34.7
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 1.1e-20 104.4 225 33.8
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 1.1e-20 104.4 229 34.1
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 1.1e-20 104.4 238 33.2
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 1.4e-20 104.0 234 34.2
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.9e-20 103.6 230 34.3
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.9e-20 103.6 230 33.9
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.9e-20 103.6 230 33.9
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 1.9e-20 103.6 227 35.7
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 1.9e-20 103.6 231 34.2
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 2.4e-20 103.2 228 34.6
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 4.2e-20 102.4 230 32.6
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 4.2e-20 102.4 229 34.1
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 4.2e-20 102.4 229 34.1
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 4.2e-20 102.4 229 33.2
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 5.4e-20 102.1 229 34.5
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 5.4e-20 102.1 228 34.6
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 5.4e-20 102.1 229 34.9
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 5.4e-20 102.1 229 34.9
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 7.1e-20 101.7 230 33.5
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 7.1e-20 101.7 227 35.7
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 9.3e-20 101.3 231 34.2
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 9.3e-20 101.3 231 34.2
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 9.3e-20 101.3 228 33.3
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 1.2e-19 100.9 227 33.5
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 1.2e-19 100.9 230 33.5
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 1.6e-19 100.5 230 33.9
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 2.7e-19 99.8 227 34.8
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 3.5e-19 99.4 226 35.0
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 3.5e-19 99.4 153 40.5
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 4.6e-19 99.0 230 32.2
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.6e-19 99.0 229 33.2
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 6.0e-19 98.6 229 33.6
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 6.0e-19 98.6 225 32.9
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 6.0e-19 98.6 227 35.2
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 6.0e-19 98.6 231 33.8
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 6.0e-19 98.6 231 34.6
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 6.0e-19 98.6 227 35.2
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 7.8e-19 98.2 229 31.9
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 7.8e-19 98.2 231 32.0
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 1.0e-18 97.8 230 31.3
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 1.0e-18 97.8 229 33.2
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.0e-18 97.8 231 32.9
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 1.0e-18 97.8 230 31.3
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 1.0e-18 97.8 229 33.6
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 1.3e-18 97.4 231 32.9
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 1.3e-18 97.4 229 33.6
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 1.7e-18 97.1 229 32.8
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 1.7e-18 97.1 227 34.4
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 2.3e-18 96.7 215 34.9
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 2.3e-18 96.7 228 35.5
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 2.3e-18 96.7 228 34.2
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 3.0e-18 96.3 229 32.8
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 3.0e-18 96.3 229 33.2
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 3.9e-18 95.9 229 31.9
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 6.6e-18 95.1 229 32.3
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 8.7e-18 94.7 227 34.4
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.1e-17 94.4 222 34.2
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 1.1e-17 94.4 234 30.3
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 1.9e-17 93.6 230 32.2
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 5.6e-17 92.0 230 32.2
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 7.3e-17 91.7 144 40.3
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 9.6e-17 91.3 225 30.2
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 3.6e-16 89.4 153 37.9
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 6.2e-16 88.6 221 31.7
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 8.1e-16 88.2 208 33.7
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 8.1e-16 88.2 153 37.3
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 8.1e-16 88.2 167 34.1
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 1.8e-15 87.0 226 32.3
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.4e-15 86.7 153 38.6
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.4e-15 86.7 233 30.9
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 3.1e-15 86.3 231 32.0
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 4.0e-15 85.9 229 32.3
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 9.0e-15 84.7 225 32.0
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 9.9e-14 81.3 228 32.9
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 8.4e-13 78.2 229 30.1
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 9.3e-12 74.7 186 31.7
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 2.1e-11 73.6 85 44.7
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 4.6e-11 72.4 237 31.2
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 4.3e-09 65.9 191 31.9
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 9.6e-09 64.7 76 40.8
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 1.3e-08 64.3 171 31.0
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 1.3e-08 64.3 70 41.4


User provided reference genes

Program Settings