Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 4.5e-92 341.3 175 100.0
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 7.5e-31 137.9 156 50.0
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 1.3e-27 127.1 90 58.9
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 1.2e-25 120.6 89 58.4
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 3.6e-25 119.0 90 55.6
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 6.2e-25 118.2 124 48.4
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 8.1e-25 117.9 113 51.3
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 8.1e-25 117.9 89 55.1
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 1.1e-24 117.5 89 57.3
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 1.4e-24 117.1 89 56.2
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 1.4e-24 117.1 125 48.0
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 1.4e-24 117.1 89 56.2
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 1.4e-24 117.1 89 53.9
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 1.8e-24 116.7 145 44.8
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 2.3e-24 116.3 89 53.9
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 5.2e-24 115.2 108 48.1
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 6.8e-24 114.8 89 53.9
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 6.8e-24 114.8 89 55.1
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 6.8e-24 114.8 89 53.9
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 6.8e-24 114.8 125 44.8
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 6.8e-24 114.8 89 52.8
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 8.9e-24 114.4 89 52.8
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 8.9e-24 114.4 89 52.8
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 8.9e-24 114.4 89 55.1
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 1.2e-23 114.0 89 51.7
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 1.2e-23 114.0 89 52.8
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.2e-23 114.0 125 43.2
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 1.2e-23 114.0 89 53.9
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 1.2e-23 114.0 89 51.7
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 1.5e-23 113.6 89 53.9
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.5e-23 113.6 125 44.0
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 1.5e-23 113.6 121 46.3
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 2.6e-23 112.8 89 53.9
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 2.6e-23 112.8 89 53.9
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 2.6e-23 112.8 89 52.8
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 2.6e-23 112.8 122 46.7
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 2.6e-23 112.8 89 51.7
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 3.4e-23 112.5 89 55.1
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 3.4e-23 112.5 148 42.6
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 4.4e-23 112.1 122 45.1
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 4.4e-23 112.1 127 44.9
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 5.8e-23 111.7 89 52.8
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 5.8e-23 111.7 89 55.1
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 5.8e-23 111.7 89 51.7
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 7.5e-23 111.3 89 51.7
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 7.5e-23 111.3 89 51.7
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 7.5e-23 111.3 89 51.7
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 7.5e-23 111.3 89 52.8
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 9.8e-23 110.9 89 51.7
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 9.8e-23 110.9 89 53.9
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 9.8e-23 110.9 174 38.5
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 9.8e-23 110.9 124 46.8
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 9.8e-23 110.9 122 43.4
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 9.8e-23 110.9 122 43.4
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 9.8e-23 110.9 118 46.6
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 1.3e-22 110.5 89 52.8
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 1.7e-22 110.2 132 43.9
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 1.7e-22 110.2 125 44.0
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 2.2e-22 109.8 89 51.7
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 2.2e-22 109.8 89 56.2
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 2.2e-22 109.8 101 50.5
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 2.2e-22 109.8 121 46.3
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 2.2e-22 109.8 89 53.9
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 2.9e-22 109.4 89 52.8
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 2.9e-22 109.4 125 41.6
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 2.9e-22 109.4 89 51.7
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 2.9e-22 109.4 121 44.6
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 2.9e-22 109.4 126 44.4
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 3.7e-22 109.0 137 43.8
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 4.9e-22 108.6 139 43.9
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 6.4e-22 108.2 124 43.5
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 6.4e-22 108.2 89 50.6
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 6.4e-22 108.2 127 44.9
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 8.3e-22 107.8 89 52.8
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 8.3e-22 107.8 89 52.8
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 1.1e-21 107.5 138 40.6
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 1.9e-21 106.7 122 47.5
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 1.9e-21 106.7 140 41.4
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.4e-21 106.3 119 45.4
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 2.4e-21 106.3 119 45.4
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 3.2e-21 105.9 104 50.0
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 4.1e-21 105.5 71 60.6
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 4.1e-21 105.5 127 44.1
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 4.1e-21 105.5 140 38.6
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 5.4e-21 105.1 151 39.7
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 7.1e-21 104.8 140 40.7
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 9.2e-21 104.4 173 36.4
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 1.2e-20 104.0 141 41.8
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 2.7e-20 102.8 143 38.5
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 4.6e-20 102.1 174 36.2
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 4.6e-20 102.1 112 42.9
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 1.0e-19 100.9 145 43.4
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 1.0e-19 100.9 92 54.3
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 3.3e-18 95.9 126 38.9
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 3.6e-17 92.4 153 35.9
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 1.1e-16 90.9 152 34.2
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 7.6e-15 84.7 113 37.2
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 2.4e-13 79.7 104 40.4
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 5.1e-11 72.0 53 50.9
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 8.6e-11 71.2 52 59.6
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 4.3e-10 68.9 101 38.6
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 4.0e-08 62.4 122 35.2
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 5.2e-08 62.0 45 55.6
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 1.7e-06 57.0 133 30.8
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 3.8e-06 55.8 120 29.2


User provided reference genes

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