Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 3.5e-83 311.6 161 100.0
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 1.3e-13 80.5 99 40.4
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 1.7e-13 80.1 130 35.4
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 2.1e-11 73.2 98 38.8
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 2.1e-11 73.2 101 34.7
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 4.7e-11 72.0 111 32.4
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 4.7e-11 72.0 98 33.7
PRCOL_00001406 Prasinoderma coloniale HOM05D005630 ORTHO05D006979 1.0e-10 70.9 131 32.8
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 1.4e-10 70.5 100 36.0
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 1.4e-10 70.5 128 29.7
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 1.8e-10 70.1 110 30.9
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 1.8e-10 70.1 98 37.8
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 2.3e-10 69.7 101 31.7
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 2.3e-10 69.7 98 33.7
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 3.9e-10 68.9 110 30.9
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 5.2e-10 68.6 98 31.6
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 6.7e-10 68.2 101 30.7
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 6.7e-10 68.2 98 32.7
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 8.8e-10 67.8 116 29.3
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.1e-09 67.4 101 31.7
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.1e-09 67.4 106 30.2
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.5e-09 67.0 116 30.2
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.5e-09 67.0 116 29.3
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 2.0e-09 66.6 110 29.1
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 2.0e-09 66.6 148 27.7
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 2.6e-09 66.2 126 27.8
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 3.3e-09 65.9 110 29.1
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 3.3e-09 65.9 110 29.1
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 3.3e-09 65.9 110 30.0
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.3e-09 65.9 116 29.3
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 3.3e-09 65.9 101 30.7
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 3.3e-09 65.9 101 30.7
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 4.4e-09 65.5 116 28.4
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 4.4e-09 65.5 101 30.7
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 4.4e-09 65.5 110 27.3
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 4.4e-09 65.5 101 29.7
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 4.4e-09 65.5 101 29.7
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 4.4e-09 65.5 101 30.7
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 5.7e-09 65.1 101 29.7
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 5.7e-09 65.1 101 29.7
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 5.7e-09 65.1 101 29.7
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 5.7e-09 65.1 98 31.6
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 5.7e-09 65.1 101 29.7
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 7.4e-09 64.7 101 29.7
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 7.4e-09 64.7 101 29.7
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 7.4e-09 64.7 98 31.6
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 7.4e-09 64.7 119 30.3
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 9.7e-09 64.3 101 29.7
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 9.7e-09 64.3 98 30.6
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 9.7e-09 64.3 98 31.6
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 9.7e-09 64.3 98 31.6
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 9.7e-09 64.3 98 31.6
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 9.7e-09 64.3 101 30.7
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 9.7e-09 64.3 98 32.7
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 1.3e-08 63.9 101 30.7
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.3e-08 63.9 101 29.7
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 1.3e-08 63.9 101 29.7
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 1.3e-08 63.9 101 28.7
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 1.3e-08 63.9 98 29.6
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.3e-08 63.9 101 30.7
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 1.7e-08 63.5 98 30.6
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.7e-08 63.5 116 26.7
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 1.7e-08 63.5 116 26.7
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 1.7e-08 63.5 95 31.6
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.7e-08 63.5 110 30.0
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 2.2e-08 63.2 95 29.5
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 2.2e-08 63.2 101 29.7
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 2.8e-08 62.8 131 26.7
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 2.8e-08 62.8 98 29.6
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 2.8e-08 62.8 98 29.6
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 2.8e-08 62.8 114 28.1
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 2.8e-08 62.8 98 30.6
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 2.8e-08 62.8 110 28.2
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 2.8e-08 62.8 101 29.7
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 2.8e-08 62.8 117 30.8
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 2.8e-08 62.8 101 27.7
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 2.8e-08 62.8 98 30.6
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 3.7e-08 62.4 101 27.7
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 3.7e-08 62.4 101 27.7
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 3.7e-08 62.4 101 27.7
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 3.7e-08 62.4 116 25.9
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 3.7e-08 62.4 109 30.3
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 3.7e-08 62.4 98 30.6
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 3.7e-08 62.4 98 30.6
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 3.7e-08 62.4 98 30.6
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 4.8e-08 62.0 101 28.7
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 6.3e-08 61.6 95 29.5
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 8.2e-08 61.2 101 28.7
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 8.2e-08 61.2 109 28.4
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 8.2e-08 61.2 95 29.5
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 8.2e-08 61.2 101 27.7
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 1.1e-07 60.8 95 29.5
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 1.4e-07 60.5 101 26.7
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.4e-07 60.5 98 30.6
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.4e-07 60.5 100 32.0
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.8e-07 60.1 95 28.4
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.8e-07 60.1 95 28.4
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 2.4e-07 59.7 90 31.1
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 2.4e-07 59.7 98 28.6
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 2.4e-07 59.7 96 28.1
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 2.4e-07 59.7 92 31.5
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 4.1e-07 58.9 98 27.6
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 5.3e-07 58.5 95 29.5
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 7.0e-07 58.2 95 26.3
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.6e-06 57.0 95 27.4
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 2.0e-06 56.6 95 29.5
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 2.6e-06 56.2 106 26.4
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 5.9e-06 55.1 78 32.1
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 5.9e-06 55.1 95 27.4


User provided reference genes

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