Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 7.1e-96 354.0 187 100.0
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 1.1e-32 144.1 124 59.7
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 2.5e-32 142.9 176 48.3
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 3.3e-32 142.5 138 55.1
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 5.6e-32 141.7 144 54.9
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 1.6e-31 140.2 155 50.3
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 1.6e-31 140.2 155 50.3
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 2.8e-31 139.4 124 56.5
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 6.2e-31 138.3 128 55.5
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 6.2e-31 138.3 172 47.1
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 8.0e-31 137.9 128 55.5
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 1.0e-30 137.5 128 54.7
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 1.0e-30 137.5 154 48.7
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.4e-30 137.1 129 55.8
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 1.8e-30 136.7 124 55.6
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 1.8e-30 136.7 181 47.0
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 1.8e-30 136.7 166 48.8
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 2.3e-30 136.3 126 54.8
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 2.3e-30 136.3 128 56.2
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 2.3e-30 136.3 136 55.1
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 2.3e-30 136.3 160 48.8
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 3.1e-30 136.0 174 48.9
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 3.1e-30 136.0 126 57.1
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 3.1e-30 136.0 126 54.8
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 3.1e-30 136.0 143 51.7
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 4.0e-30 135.6 139 54.0
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 4.0e-30 135.6 124 55.6
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 5.2e-30 135.2 126 56.3
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 5.2e-30 135.2 151 49.0
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 5.2e-30 135.2 153 49.0
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 5.2e-30 135.2 124 57.3
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 1.2e-29 134.0 124 55.6
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 1.5e-29 133.7 154 50.0
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 2.6e-29 132.9 157 49.7
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 2.6e-29 132.9 129 54.3
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.6e-29 132.9 147 50.3
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 4.4e-29 132.1 190 46.8
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 4.4e-29 132.1 124 56.5
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 4.4e-29 132.1 157 46.5
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 7.5e-29 131.3 124 54.8
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 7.5e-29 131.3 151 49.7
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 9.8e-29 131.0 147 49.7
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 9.8e-29 131.0 152 48.7
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 9.8e-29 131.0 152 48.7
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 9.8e-29 131.0 126 54.0
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 9.8e-29 131.0 186 44.6
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 1.3e-28 130.6 184 45.1
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 1.3e-28 130.6 177 45.8
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 1.3e-28 130.6 152 47.4
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 1.3e-28 130.6 129 54.3
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 1.7e-28 130.2 133 54.1
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 2.2e-28 129.8 147 49.7
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 2.2e-28 129.8 147 49.7
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 2.2e-28 129.8 147 49.7
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 2.2e-28 129.8 147 49.7
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.2e-28 129.8 126 53.2
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 2.2e-28 129.8 157 46.5
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 2.2e-28 129.8 136 52.2
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 2.9e-28 129.4 134 52.2
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 2.9e-28 129.4 131 54.2
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 3.7e-28 129.0 121 58.7
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 3.7e-28 129.0 147 49.7
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 3.7e-28 129.0 167 47.3
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 4.9e-28 128.6 151 47.0
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 4.9e-28 128.6 123 55.3
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 6.4e-28 128.3 123 56.1
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 6.4e-28 128.3 166 47.6
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 1.1e-27 127.5 128 52.3
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 1.1e-27 127.5 116 56.9
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 1.4e-27 127.1 171 46.2
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 1.9e-27 126.7 165 47.3
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 4.1e-27 125.6 165 47.9
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 5.4e-27 125.2 143 48.3
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 9.2e-27 124.4 119 52.9
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 1.6e-26 123.6 120 56.7
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 4.6e-26 122.1 136 50.0
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 1.0e-25 120.9 126 51.6
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 1.0e-25 120.9 153 48.4
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 2.3e-25 119.8 175 43.4
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 3.0e-25 119.4 189 40.2
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 5.0e-25 118.6 189 40.2
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 1.5e-24 117.1 184 41.3
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.9e-24 116.7 163 41.1
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 1.9e-24 116.7 131 51.1
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 2.1e-23 113.2 106 57.5
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 2.1e-23 113.2 103 58.3
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.6e-23 112.5 121 53.7
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.6e-23 112.5 121 53.7
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 6.2e-23 111.7 106 56.6
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 1.4e-22 110.5 105 57.1
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 1.8e-22 110.2 111 51.4
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 1.5e-21 107.1 157 41.4
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.5e-21 107.1 113 51.3
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 2.6e-21 106.3 127 50.4
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 3.4e-21 105.9 179 40.8
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 5.8e-21 105.1 101 52.5
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 1.7e-20 103.6 98 57.1
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 2.4e-19 99.8 116 46.6
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.9e-16 90.1 106 49.1
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 2.8e-15 86.3 103 46.6
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 8.1e-15 84.7 81 53.1
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 8.1e-15 84.7 99 51.5
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 1.1e-14 84.3 105 45.7
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 1.8e-14 83.6 115 46.1
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 5.2e-14 82.0 61 63.9
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 2.6e-13 79.7 111 42.3
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.7e-09 67.0 72 54.2
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.7e-09 67.0 72 54.2
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 1.1e-08 64.3 140 32.9
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 1.1e-08 64.3 99 40.4
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.4e-06 56.6 94 37.2
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 6.8e-06 55.1 77 42.9


User provided reference genes

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