Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G548 Micromonas commoda HOM05D004224 ORTHO05D001113 6.4e-269 930.2 494 100.0
SMO144G0198 Selaginella moellendorffii HOM05D004224 ORTHO05D001113 2.4e-26 124.4 444 28.2
Mapoly0152s0006 Marchantia polymorpha HOM05D004224 ORTHO05D001113 6.0e-25 119.8 359 30.1
Pp3c24_9610 Physcomitrium patens HOM05D004224 ORTHO05D001113 1.0e-24 119.0 401 29.2
AagrBONN_evm.TU.Sc2ySwM_228.2225 Anthoceros agrestis HOM05D001316 ORTHO05D001113 3.3e-23 114.0 426 30.0
Cre14.g613134 Chlamydomonas reinhardtii HOM05D004224 ORTHO05D001113 1.3e-14 85.5 340 26.2
PRCOL_00001449 Prasinoderma coloniale HOM05D004224 ORTHO05D006437 2.0e-12 78.2 465 28.2
Os02g0725200 Oryza sativa ssp. japonica HOM05D004224 ORTHO05D006437 2.2e-11 74.7 340 27.1
Lj6g0004652 Lotus japonicus HOM05D004224 ORTHO05D006437 1.0e-08 65.9 453 24.7
MD00G1030500 Malus domestica HOM05D007044 ORTHO05D008981 1.3e-08 65.5 206 28.6
ECA236G4771 Erigeron canadensis HOM05D004224 ORTHO05D006437 1.7e-08 65.1 340 26.2
Manes.13G060800 Manihot esculenta HOM05D004224 ORTHO05D006437 2.3e-08 64.7 342 25.7
Sabra14G0129100 Salix brachista HOM05D004224 ORTHO05D006437 2.3e-08 64.7 387 26.9
AUR62014995 Chenopodium quinoa HOM05D004224 ORTHO05D006437 3.9e-08 63.9 369 25.7
DCAR_019670 Daucus carota HOM05D004224 ORTHO05D006437 3.9e-08 63.9 326 26.1
MD17G1118300 Malus domestica HOM05D004224 ORTHO05D006437 5.1e-08 63.5 340 25.9
SEGI_13327 Sequoiadendron giganteum HOM05D004224 ORTHO05D006437 5.1e-08 63.5 337 24.3
PRCOL_00006912 Prasinoderma coloniale HOM05D004224 ORTHO05D001113 1.1e-07 62.4 153 36.6
HanXRQChr11g0329421 Helianthus annuus HOM05D004224 ORTHO05D006437 1.9e-07 61.6 375 26.1
Glyma.13G010500 Glycine max HOM05D004224 ORTHO05D006437 2.5e-07 61.2 432 24.3
Ca_16340_v3 Cicer arietinum L. HOM05D004224 ORTHO05D006437 4.3e-07 60.5 433 25.2
QL04p067662 Quercus lobata HOM05D004224 ORTHO05D006437 4.3e-07 60.5 341 25.5
PSO675G8516 Papaver somniferum HOM05D004224 ORTHO05D006437 7.3e-07 59.7 340 25.6
Actinidia09800 Actinidia chinensis HOM05D004224 ORTHO05D006437 9.6e-07 59.3 463 24.6
Cre12.g524500 Chlamydomonas reinhardtii HOM05D005656 ORTHO05D007094 9.6e-07 59.3 138 32.6
Potri.014G169300 Populus trichocarpa HOM05D004224 ORTHO05D006437 9.6e-07 59.3 387 24.8
TAR629G0565 Trochodendron aralioides HOM05D004224 ORTHO05D006437 9.6e-07 59.3 348 27.0
CSS0035947 Camellia sinensis var. sinensis HOM05D004224 ORTHO05D006437 1.3e-06 58.9 364 25.3
PSO541G4615 Papaver somniferum HOM05D004224 ORTHO05D006437 1.3e-06 58.9 339 25.4
Lsat_1_v5_gn_7_97380 Lactuca sativa HOM05D004224 ORTHO05D006437 1.6e-06 58.5 340 25.6
Cpa.g.sc136.38 Carica papaya HOM05D004224 ORTHO05D006437 2.1e-06 58.2 341 25.2
Ciclev10014974m.g Citrus clementina HOM05D004224 ORTHO05D006437 2.8e-06 57.8 317 25.6
Gohir.D07G171000 Gossypium hirsutum HOM05D004224 ORTHO05D006437 2.8e-06 57.8 341 25.8
Gorai.001G190900 Gossypium raimondii HOM05D004224 ORTHO05D006437 2.8e-06 57.8 341 25.8
Hma1.2p1_0629F.1_g192230 Hydrangea macrophylla HOM05D004224 ORTHO05D006437 2.8e-06 57.8 431 24.6
MBI15_g41427_MAGBIO Magnolia biondii HOM05D004224 ORTHO05D006437 2.8e-06 57.8 308 23.7
Oeu040454.1 Olea europaea HOM05D004224 ORTHO05D006437 3.6e-06 57.4 463 23.8
Pp3c4_19510 Physcomitrium patens HOM05D004224 ORTHO05D006437 3.6e-06 57.4 146 34.9
ATR0751G026 Amborella trichopoda HOM05D004224 ORTHO05D006437 4.8e-06 57.0 322 27.0
Dinv21312 Davidia involucrata HOM05D004224 ORTHO05D006437 4.8e-06 57.0 320 25.3
Eucgr.A01370 Eucalyptus grandis HOM05D004224 ORTHO05D006437 6.2e-06 56.6 374 23.5
Lj1A799T35 Lonicera japonica HOM05D004224 ORTHO05D006437 6.2e-06 56.6 382 25.7
vmacro12069 Vaccinium macrocarpon HOM05D004224 ORTHO05D006437 6.2e-06 56.6 399 24.8


User provided reference genes

Program Settings